RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
ZNF548-203ENST00000594668 KIAA0586Q9BVV6 1533 aa15.25■□□□□ 0.03
ZNF548-203ENST00000594668 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
ZNF548-203ENST00000594668 SHROOM2Q13796 1616 aa15.23■□□□□ 0.03
ZNF548-203ENST00000594668 IQGAP2Q13576 1575 aa15.22■□□□□ 0.03
ZNF548-203ENST00000594668 JPH4Q96JJ6 628 aa15.21■□□□□ 0.03
ZNF548-203ENST00000594668 UBTFP17480 764 aaKnown RBP15.2■□□□□ 0.02
ZNF548-203ENST00000594668 LOC105371045A0A1W2PR82 267 aa15.18■□□□□ 0.02
ZNF548-203ENST00000594668 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
ZNF548-203ENST00000594668 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
ZNF548-203ENST00000594668 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
ZNF548-203ENST00000594668 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
ZNF548-203ENST00000594668 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
ZNF548-203ENST00000594668 PRG4Q92954 1404 aaPredicted RBP15.15■□□□□ 0.02
ZNF548-203ENST00000594668 UGGT2Q9NYU1 1516 aa15.14■□□□□ 0.01
ZNF548-203ENST00000594668 RANGAP1P46060 587 aaPredicted RBP15.11■□□□□ 0.01
ZNF548-203ENST00000594668 DISP1Q96F81 1524 aa15.11■□□□□ 0.01
ZNF548-203ENST00000594668 TNIKQ9UKE5 1360 aa15.1■□□□□ 0.01
ZNF548-203ENST00000594668 KIAA0556O60303 1618 aa15.08■□□□□ 0
ZNF548-203ENST00000594668 SAMD9Q5K651 1589 aa15.07■□□□□ 0
ZNF548-203ENST00000594668 CARMIL2Q6F5E8 1435 aa15.06■□□□□ 0
ZNF548-203ENST00000594668 ARAP1Q96P48 1450 aa15.06■□□□□ 0
ZNF548-203ENST00000594668 P3H3Q8IVL6 736 aa15.05■□□□□ -0
ZNF548-203ENST00000594668 CYB5RLQ6IPT4 315 aa15.03■□□□□ -0
ZNF548-203ENST00000594668 TTBK1Q5TCY1 1321 aaPredicted RBP15.01□□□□□ -0.01
ZNF548-203ENST00000594668 EFCAB5A4FU69 1503 aa15.01□□□□□ -0.01
ZNF548-203ENST00000594668 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
ZNF548-203ENST00000594668 PTPRGP23470 1445 aa14.99□□□□□ -0.01
ZNF548-203ENST00000594668 FHOD3Q2V2M9 1422 aa14.98□□□□□ -0.01
ZNF548-203ENST00000594668 CLIP1P30622 1438 aa14.97□□□□□ -0.01
ZNF548-203ENST00000594668 CEP162Q5TB80 1403 aa14.97□□□□□ -0.01
ZNF548-203ENST00000594668 ADCY10Q96PN6 1610 aa14.92□□□□□ -0.02
ZNF548-203ENST00000594668 ABCA8O94911 1581 aa14.91□□□□□ -0.02
ZNF548-203ENST00000594668 PLB1Q6P1J6 1458 aa14.91□□□□□ -0.02
ZNF548-203ENST00000594668 UACAQ9BZF9 1416 aa14.9□□□□□ -0.02
ZNF548-203ENST00000594668 RAPGEF6Q8TEU7 1601 aa14.88□□□□□ -0.03
ZNF548-203ENST00000594668 UHRF1BP1LA0JNW5 1464 aa14.87□□□□□ -0.03
ZNF548-203ENST00000594668 ABCC2Q92887 1545 aa14.87□□□□□ -0.03
ZNF548-203ENST00000594668 FMN1Q68DA7 1419 aa14.85□□□□□ -0.03
ZNF548-203ENST00000594668 LRRIQ1Q96JM4 1722 aa14.85□□□□□ -0.03
ZNF548-203ENST00000594668 ZCCHC11Q5TAX3 1644 aaKnown RBP14.82□□□□□ -0.04
ZNF548-203ENST00000594668 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
ZNF548-203ENST00000594668 ARID3CA6NKF2 412 aa14.81□□□□□ -0.04
ZNF548-203ENST00000594668 NUP153P49790 1475 aaKnown RBP14.81□□□□□ -0.04
ZNF548-203ENST00000594668 KDM5BQ9UGL1 1544 aa14.81□□□□□ -0.04
ZNF548-203ENST00000594668 ATP1B4Q9UN42 357 aaPredicted RBP14.8□□□□□ -0.04
ZNF548-203ENST00000594668 ATP10BO94823 1461 aa14.79□□□□□ -0.04
ZNF548-203ENST00000594668 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
ZNF548-203ENST00000594668 CASKIN1Q8WXD9 1431 aa14.79□□□□□ -0.04
ZNF548-203ENST00000594668 HECW1Q76N89 1606 aa14.78□□□□□ -0.04
ZNF548-203ENST00000594668 VPS8Q8N3P4 1428 aa14.76□□□□□ -0.05
ZNF548-203ENST00000594668 FYCO1Q9BQS8 1478 aa14.76□□□□□ -0.05
ZNF548-203ENST00000594668 EPRSP07814 1512 aaKnown RBP14.75□□□□□ -0.05
ZNF548-203ENST00000594668 CDK13Q14004 1512 aaKnown RBP14.74□□□□□ -0.05
ZNF548-203ENST00000594668 MAPKBP1O60336 1514 aa14.73□□□□□ -0.05
ZNF548-203ENST00000594668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
ZNF548-203ENST00000594668 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
ZNF548-203ENST00000594668 ASXL2Q76L83 1435 aa14.71□□□□□ -0.05
ZNF548-203ENST00000594668 KIF13AQ9H1H9 1805 aa14.7□□□□□ -0.06
ZNF548-203ENST00000594668 CCDC18Q5T9S5 1454 aa14.69□□□□□ -0.06
ZNF548-203ENST00000594668 CFAP43Q8NDM7 1665 aa14.66□□□□□ -0.06
ZNF548-203ENST00000594668 WDR7Q9Y4E6 1490 aa14.66□□□□□ -0.06
ZNF548-203ENST00000594668 PLEKHD1A6NEE1 506 aa14.66□□□□□ -0.06
ZNF548-203ENST00000594668 MAGI3Q5TCQ9 1506 aa14.66□□□□□ -0.06
ZNF548-203ENST00000594668 KCNH8Q96L42 1107 aa14.65□□□□□ -0.06
ZNF548-203ENST00000594668 DIP2BQ9P265 1576 aa14.64□□□□□ -0.07
ZNF548-203ENST00000594668 TIAM1Q13009 1591 aa14.64□□□□□ -0.07
ZNF548-203ENST00000594668 ABCC10Q5T3U5 1492 aa14.63□□□□□ -0.07
ZNF548-203ENST00000594668 TSPOAP1O95153 1857 aa14.62□□□□□ -0.07
ZNF548-203ENST00000594668 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
ZNF548-203ENST00000594668 CDK11AQ9UQ88 783 aaPredicted RBP14.62□□□□□ -0.07
ZNF548-203ENST00000594668 MAP3K1Q13233 1512 aa14.61□□□□□ -0.07
ZNF548-203ENST00000594668 FAM69CQ0P6D2 419 aa14.61□□□□□ -0.07
ZNF548-203ENST00000594668 GLI2P10070 1586 aa14.6□□□□□ -0.07
ZNF548-203ENST00000594668 TROQ12816 1431 aaPredicted RBP14.6□□□□□ -0.07
ZNF548-203ENST00000594668 KIF14Q15058 1648 aa14.6□□□□□ -0.07
ZNF548-203ENST00000594668 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
ZNF548-203ENST00000594668 APLP2Q06481 763 aa14.58□□□□□ -0.08
ZNF548-203ENST00000594668 MAP3K4Q9Y6R4 1608 aa14.58□□□□□ -0.08
ZNF548-203ENST00000594668 ABCA9Q8IUA7 1624 aa14.57□□□□□ -0.08
ZNF548-203ENST00000594668 LRRC9Q6ZRR7 1453 aa14.57□□□□□ -0.08
ZNF548-203ENST00000594668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.56□□□□□ -0.08
ZNF548-203ENST00000594668 MTUS2Q5JR59 1369 aa14.56□□□□□ -0.08
ZNF548-203ENST00000594668 TTC37Q6PGP7 1564 aa14.56□□□□□ -0.08
ZNF548-203ENST00000594668 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
ZNF548-203ENST00000594668 PPRC1Q5VV67 1664 aaKnown RBP14.55□□□□□ -0.08
ZNF548-203ENST00000594668 SUPT6HQ7KZ85 1726 aaKnown RBP14.53□□□□□ -0.08
ZNF548-203ENST00000594668 CDC42BPAQ5VT25 1732 aa14.52□□□□□ -0.08
ZNF548-203ENST00000594668 MYO5CQ9NQX4 1742 aa14.52□□□□□ -0.08
ZNF548-203ENST00000594668 CDC42BPBQ9Y5S2 1711 aa14.52□□□□□ -0.09
ZNF548-203ENST00000594668 CD109Q6YHK3 1445 aa14.51□□□□□ -0.09
ZNF548-203ENST00000594668 PPARGC1BQ86YN6 1023 aaKnown RBP14.51□□□□□ -0.09
ZNF548-203ENST00000594668 NCOA2Q15596 1464 aa14.49□□□□□ -0.09
ZNF548-203ENST00000594668 PREX2Q70Z35 1606 aa14.47□□□□□ -0.09
ZNF548-203ENST00000594668 PLCH2O75038 1416 aa14.46□□□□□ -0.09
ZNF548-203ENST00000594668 GPATCH8Q9UKJ3 1502 aaKnown RBP14.46□□□□□ -0.1
ZNF548-203ENST00000594668 ITSN2Q9NZM3 1697 aa14.44□□□□□ -0.1
ZNF548-203ENST00000594668 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
ZNF548-203ENST00000594668 ARAP3Q8WWN8 1544 aa14.42□□□□□ -0.1
ZNF548-203ENST00000594668 TEX14Q8IWB6 1497 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms