RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 SYNJ2O15056 1496 aa23.33■■□□□ 1.33
GTF2F1-202ENST00000593678 ARHGAP35Q9NRY4 1499 aa23.32■■□□□ 1.32
GTF2F1-202ENST00000593678 GRIN2AQ12879 1464 aa23.31■■□□□ 1.32
GTF2F1-202ENST00000593678 ARAP1Q96P48 1450 aa23.3■■□□□ 1.32
GTF2F1-202ENST00000593678 EFCAB5A4FU69 1503 aa23.29■■□□□ 1.32
GTF2F1-202ENST00000593678 FBLN2P98095 1184 aa23.28■■□□□ 1.32
GTF2F1-202ENST00000593678 APLP2Q06481 763 aa23.27■■□□□ 1.32
GTF2F1-202ENST00000593678 IQGAP2Q13576 1575 aa23.25■■□□□ 1.31
GTF2F1-202ENST00000593678 KIAA0586Q9BVV6 1533 aa23.19■■□□□ 1.3
GTF2F1-202ENST00000593678 P3H3Q8IVL6 736 aa23.18■■□□□ 1.3
GTF2F1-202ENST00000593678 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
GTF2F1-202ENST00000593678 PPARGC1BQ86YN6 1023 aaKnown RBP23.16■■□□□ 1.3
GTF2F1-202ENST00000593678 SAMD9Q5K651 1589 aa23.15■■□□□ 1.3
GTF2F1-202ENST00000593678 FHOD3Q2V2M9 1422 aa23.14■■□□□ 1.29
GTF2F1-202ENST00000593678 CEP170Q5SW79 1584 aa23.12■■□□□ 1.29
GTF2F1-202ENST00000593678 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
GTF2F1-202ENST00000593678 NUP160Q12769 1436 aa23.11■■□□□ 1.29
GTF2F1-202ENST00000593678 FMN1Q68DA7 1419 aa23.11■■□□□ 1.29
GTF2F1-202ENST00000593678 UGGT2Q9NYU1 1516 aa23.09■■□□□ 1.29
GTF2F1-202ENST00000593678 CHD1O14646 1710 aa23.08■■□□□ 1.28
GTF2F1-202ENST00000593678 TTBK1Q5TCY1 1321 aaPredicted RBP23.05■■□□□ 1.28
GTF2F1-202ENST00000593678 FYCO1Q9BQS8 1478 aa23.01■■□□□ 1.27
GTF2F1-202ENST00000593678 PCF11O94913 1555 aaKnown RBP23.01■■□□□ 1.27
GTF2F1-202ENST00000593678 ATP1B4Q9UN42 357 aaPredicted RBP23.01■■□□□ 1.27
GTF2F1-202ENST00000593678 CASKIN1Q8WXD9 1431 aa22.99■■□□□ 1.27
GTF2F1-202ENST00000593678 KIAA0556O60303 1618 aa22.98■■□□□ 1.27
GTF2F1-202ENST00000593678 CARMIL2Q6F5E8 1435 aa22.98■■□□□ 1.27
GTF2F1-202ENST00000593678 JPH4Q96JJ6 628 aa22.97■■□□□ 1.27
GTF2F1-202ENST00000593678 MAP3K1Q13233 1512 aa22.95■■□□□ 1.26
GTF2F1-202ENST00000593678 DISP1Q96F81 1524 aa22.95■■□□□ 1.26
GTF2F1-202ENST00000593678 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
GTF2F1-202ENST00000593678 CFAP43Q8NDM7 1665 aa22.88■■□□□ 1.25
GTF2F1-202ENST00000593678 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
GTF2F1-202ENST00000593678 HECW1Q76N89 1606 aa22.86■■□□□ 1.25
GTF2F1-202ENST00000593678 PRG4Q92954 1404 aaPredicted RBP22.84■■□□□ 1.25
GTF2F1-202ENST00000593678 CCDC18Q5T9S5 1454 aa22.82■■□□□ 1.24
GTF2F1-202ENST00000593678 LRRC9Q6ZRR7 1453 aa22.82■■□□□ 1.24
GTF2F1-202ENST00000593678 SHROOM2Q13796 1616 aa22.8■■□□□ 1.24
GTF2F1-202ENST00000593678 CLASP1Q7Z460 1538 aa22.78■■□□□ 1.24
GTF2F1-202ENST00000593678 RAPGEF6Q8TEU7 1601 aa22.77■■□□□ 1.24
GTF2F1-202ENST00000593678 MTUS2Q5JR59 1369 aa22.75■■□□□ 1.23
GTF2F1-202ENST00000593678 LRRIQ1Q96JM4 1722 aa22.73■■□□□ 1.23
GTF2F1-202ENST00000593678 EPRSP07814 1512 aaKnown RBP22.73■■□□□ 1.23
GTF2F1-202ENST00000593678 PTPRGP23470 1445 aa22.71■■□□□ 1.23
GTF2F1-202ENST00000593678 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
GTF2F1-202ENST00000593678 PLB1Q6P1J6 1458 aa22.68■■□□□ 1.22
GTF2F1-202ENST00000593678 EHBP1L1Q8N3D4 1523 aa22.68■■□□□ 1.22
GTF2F1-202ENST00000593678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.67■■□□□ 1.22
GTF2F1-202ENST00000593678 HNRNPUL2Q1KMD3 747 aaKnown RBP22.67■■□□□ 1.22
GTF2F1-202ENST00000593678 NUP153P49790 1475 aaKnown RBP22.67■■□□□ 1.22
GTF2F1-202ENST00000593678 ARID3CA6NKF2 412 aa22.66■■□□□ 1.22
GTF2F1-202ENST00000593678 CDK11AQ9UQ88 783 aaPredicted RBP22.66■■□□□ 1.22
GTF2F1-202ENST00000593678 CDK13Q14004 1512 aaKnown RBP22.65■■□□□ 1.22
GTF2F1-202ENST00000593678 ABCA8O94911 1581 aa22.63■■□□□ 1.21
GTF2F1-202ENST00000593678 SUPT6HQ7KZ85 1726 aaKnown RBP22.62■■□□□ 1.21
GTF2F1-202ENST00000593678 RRBP1Q9P2E9 1410 aaKnown RBP22.61■■□□□ 1.21
GTF2F1-202ENST00000593678 ERCC6L2Q5T890 1561 aa22.6■■□□□ 1.21
GTF2F1-202ENST00000593678 CCNB3Q8WWL7 1395 aa22.59■■□□□ 1.21
GTF2F1-202ENST00000593678 PHLDB1Q86UU1 1377 aa22.58■■□□□ 1.2
GTF2F1-202ENST00000593678 UACAQ9BZF9 1416 aa22.56■■□□□ 1.2
GTF2F1-202ENST00000593678 NCOA2Q15596 1464 aa22.55■■□□□ 1.2
GTF2F1-202ENST00000593678 MAGI3Q5TCQ9 1506 aa22.55■■□□□ 1.2
GTF2F1-202ENST00000593678 PLEKHD1A6NEE1 506 aa22.49■■□□□ 1.19
GTF2F1-202ENST00000593678 ABCC2Q92887 1545 aa22.49■■□□□ 1.19
GTF2F1-202ENST00000593678 TROQ12816 1431 aaPredicted RBP22.49■■□□□ 1.19
GTF2F1-202ENST00000593678 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
GTF2F1-202ENST00000593678 FAM50AQ14320 339 aaKnown RBP22.48■■□□□ 1.19
GTF2F1-202ENST00000593678 ATP10BO94823 1461 aa22.48■■□□□ 1.19
GTF2F1-202ENST00000593678 FGD6Q6ZV73 1430 aa22.47■■□□□ 1.19
GTF2F1-202ENST00000593678 ARHGEF11O15085 1522 aa22.46■■□□□ 1.19
GTF2F1-202ENST00000593678 UHRF1BP1LA0JNW5 1464 aa22.43■■□□□ 1.18
GTF2F1-202ENST00000593678 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.18
GTF2F1-202ENST00000593678 ITGAEP38570 1179 aa22.41■■□□□ 1.18
GTF2F1-202ENST00000593678 ADCY10Q96PN6 1610 aa22.4■■□□□ 1.18
GTF2F1-202ENST00000593678 KIF14Q15058 1648 aa22.39■■□□□ 1.17
GTF2F1-202ENST00000593678 MIA2Q96PC5 1412 aa22.37■■□□□ 1.17
GTF2F1-202ENST00000593678 PTPN23Q9H3S7 1636 aa22.36■■□□□ 1.17
GTF2F1-202ENST00000593678 HRCP23327 699 aa22.35■■□□□ 1.17
GTF2F1-202ENST00000593678 ITSN2Q9NZM3 1697 aa22.34■■□□□ 1.17
GTF2F1-202ENST00000593678 ZCCHC11Q5TAX3 1644 aaKnown RBP22.32■■□□□ 1.16
GTF2F1-202ENST00000593678 KDM5BQ9UGL1 1544 aa22.32■■□□□ 1.16
GTF2F1-202ENST00000593678 CCER1Q8TC90 406 aaPredicted RBP22.31■■□□□ 1.16
GTF2F1-202ENST00000593678 TCOF1Q13428 1488 aaKnown RBP22.29■■□□□ 1.16
GTF2F1-202ENST00000593678 ZEB1P37275 1124 aaPredicted RBP22.27■■□□□ 1.16
GTF2F1-202ENST00000593678 CFDP1Q9UEE9 299 aaPredicted RBP22.27■■□□□ 1.16
GTF2F1-202ENST00000593678 NPM1P06748 294 aaKnown RBP eCLIP22.25■■□□□ 1.15
GTF2F1-202ENST00000593678 GPATCH8Q9UKJ3 1502 aaKnown RBP22.25■■□□□ 1.15
GTF2F1-202ENST00000593678 ABCC10Q5T3U5 1492 aa22.23■■□□□ 1.15
GTF2F1-202ENST00000593678 KCNH8Q96L42 1107 aa22.2■■□□□ 1.14
GTF2F1-202ENST00000593678 CDC42BPAQ5VT25 1732 aa22.2■■□□□ 1.14
GTF2F1-202ENST00000593678 ZNF777Q9ULD5 760 aaPredicted RBP22.19■■□□□ 1.14
GTF2F1-202ENST00000593678 CAMSAP2Q08AD1 1489 aa22.18■■□□□ 1.14
GTF2F1-202ENST00000593678 SETD5Q9C0A6 1442 aa22.17■■□□□ 1.14
GTF2F1-202ENST00000593678 WDR7Q9Y4E6 1490 aa22.16■■□□□ 1.14
GTF2F1-202ENST00000593678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.15■■□□□ 1.14
GTF2F1-202ENST00000593678 PREX2Q70Z35 1606 aa22.14■■□□□ 1.14
GTF2F1-202ENST00000593678 RIMBP3CA6NJZ7 1639 aa22.14■■□□□ 1.13
GTF2F1-202ENST00000593678 RIMBP3BA6NNM3 1639 aa22.14■■□□□ 1.13
GTF2F1-202ENST00000593678 RIMBP3Q9UFD9 1639 aa22.14■■□□□ 1.13
GTF2F1-202ENST00000593678 ZNF644Q9H582 1327 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms