RNA–Protein interactions for RNA: ENST00000593166.1

SLC25A39-217, Transcript of solute carrier family 25 member 39, humanhuman

TSL 3

Gene SLC25A39, Length 797 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-217ENST00000593166 SHROOM2Q13796 1616 aa25.73■■□□□ 1.71
SLC25A39-217ENST00000593166 IQGAP2Q13576 1575 aa25.69■■□□□ 1.7
SLC25A39-217ENST00000593166 ARHGEF11O15085 1522 aa25.69■■□□□ 1.7
SLC25A39-217ENST00000593166 GOLGA3Q08378 1498 aa25.69■■□□□ 1.7
SLC25A39-217ENST00000593166 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
SLC25A39-217ENST00000593166 CTTNBP2Q8WZ74 1663 aa25.67■■□□□ 1.7
SLC25A39-217ENST00000593166 RIMBP3CA6NJZ7 1639 aa25.63■■□□□ 1.69
SLC25A39-217ENST00000593166 RIMBP3BA6NNM3 1639 aa25.63■■□□□ 1.69
SLC25A39-217ENST00000593166 RIMBP3Q9UFD9 1639 aa25.63■■□□□ 1.69
SLC25A39-217ENST00000593166 PRG4Q92954 1404 aaPredicted RBP25.61■■□□□ 1.69
SLC25A39-217ENST00000593166 UGGT2Q9NYU1 1516 aa25.59■■□□□ 1.69
SLC25A39-217ENST00000593166 ERCC6L2Q5T890 1561 aa25.57■■□□□ 1.68
SLC25A39-217ENST00000593166 UBTFP17480 764 aaKnown RBP25.54■■□□□ 1.68
SLC25A39-217ENST00000593166 EHMT2Q96KQ7 1210 aa25.52■■□□□ 1.68
SLC25A39-217ENST00000593166 ARAP1Q96P48 1450 aa25.52■■□□□ 1.68
SLC25A39-217ENST00000593166 CARMIL2Q6F5E8 1435 aa25.51■■□□□ 1.67
SLC25A39-217ENST00000593166 DISP1Q96F81 1524 aa25.5■■□□□ 1.67
SLC25A39-217ENST00000593166 KIAA0556O60303 1618 aa25.45■■□□□ 1.66
SLC25A39-217ENST00000593166 TNIKQ9UKE5 1360 aa25.43■■□□□ 1.66
SLC25A39-217ENST00000593166 SAMD9Q5K651 1589 aa25.4■■□□□ 1.66
SLC25A39-217ENST00000593166 CYB5RLQ6IPT4 315 aa25.39■■□□□ 1.66
SLC25A39-217ENST00000593166 EFCAB5A4FU69 1503 aa25.37■■□□□ 1.65
SLC25A39-217ENST00000593166 PTPRGP23470 1445 aa25.36■■□□□ 1.65
SLC25A39-217ENST00000593166 LOC105371045A0A1W2PR82 267 aa25.32■■□□□ 1.64
SLC25A39-217ENST00000593166 RANGAP1P46060 587 aaPredicted RBP25.31■■□□□ 1.64
SLC25A39-217ENST00000593166 ARHGAP35Q9NRY4 1499 aa25.28■■□□□ 1.64
SLC25A39-217ENST00000593166 P3H3Q8IVL6 736 aa25.26■■□□□ 1.63
SLC25A39-217ENST00000593166 FHOD3Q2V2M9 1422 aa25.25■■□□□ 1.63
SLC25A39-217ENST00000593166 CLIP1P30622 1438 aa25.23■■□□□ 1.63
SLC25A39-217ENST00000593166 TTBK1Q5TCY1 1321 aaPredicted RBP25.23■■□□□ 1.63
SLC25A39-217ENST00000593166 UACAQ9BZF9 1416 aa25.2■■□□□ 1.63
SLC25A39-217ENST00000593166 UHRF1BP1LA0JNW5 1464 aa25.19■■□□□ 1.62
SLC25A39-217ENST00000593166 CEP162Q5TB80 1403 aa25.19■■□□□ 1.62
SLC25A39-217ENST00000593166 ADCY10Q96PN6 1610 aa25.17■■□□□ 1.62
SLC25A39-217ENST00000593166 ABCC2Q92887 1545 aa25.17■■□□□ 1.62
SLC25A39-217ENST00000593166 ABCA8O94911 1581 aa25.16■■□□□ 1.62
SLC25A39-217ENST00000593166 PLB1Q6P1J6 1458 aa25.15■■□□□ 1.62
SLC25A39-217ENST00000593166 FMN1Q68DA7 1419 aa25.12■■□□□ 1.61
SLC25A39-217ENST00000593166 RAPGEF6Q8TEU7 1601 aa25.07■■□□□ 1.6
SLC25A39-217ENST00000593166 KDM5BQ9UGL1 1544 aa25.06■■□□□ 1.6
SLC25A39-217ENST00000593166 NPM1P06748 294 aaKnown RBP eCLIP25.04■■□□□ 1.6
SLC25A39-217ENST00000593166 NUP153P49790 1475 aaKnown RBP25.01■■□□□ 1.59
SLC25A39-217ENST00000593166 MAPKBP1O60336 1514 aa24.98■■□□□ 1.59
SLC25A39-217ENST00000593166 CASKIN1Q8WXD9 1431 aa24.96■■□□□ 1.59
SLC25A39-217ENST00000593166 ZCCHC11Q5TAX3 1644 aaKnown RBP24.96■■□□□ 1.59
SLC25A39-217ENST00000593166 ATP10BO94823 1461 aa24.95■■□□□ 1.58
SLC25A39-217ENST00000593166 HECW1Q76N89 1606 aa24.94■■□□□ 1.58
SLC25A39-217ENST00000593166 PCF11O94913 1555 aaKnown RBP24.93■■□□□ 1.58
SLC25A39-217ENST00000593166 FYCO1Q9BQS8 1478 aa24.92■■□□□ 1.58
SLC25A39-217ENST00000593166 ASXL2Q76L83 1435 aa24.89■■□□□ 1.58
SLC25A39-217ENST00000593166 VPS8Q8N3P4 1428 aa24.88■■□□□ 1.57
SLC25A39-217ENST00000593166 EPRSP07814 1512 aaKnown RBP24.87■■□□□ 1.57
SLC25A39-217ENST00000593166 ARID3CA6NKF2 412 aa24.87■■□□□ 1.57
SLC25A39-217ENST00000593166 ATP1B4Q9UN42 357 aaPredicted RBP24.84■■□□□ 1.57
SLC25A39-217ENST00000593166 CDK13Q14004 1512 aaKnown RBP24.84■■□□□ 1.57
SLC25A39-217ENST00000593166 WDR7Q9Y4E6 1490 aa24.83■■□□□ 1.57
SLC25A39-217ENST00000593166 CCDC18Q5T9S5 1454 aa24.83■■□□□ 1.56
SLC25A39-217ENST00000593166 ABCC10Q5T3U5 1492 aa24.82■■□□□ 1.56
SLC25A39-217ENST00000593166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.8■■□□□ 1.56
SLC25A39-217ENST00000593166 HNRNPUL2Q1KMD3 747 aaKnown RBP24.8■■□□□ 1.56
SLC25A39-217ENST00000593166 LRRIQ1Q96JM4 1722 aa24.78■■□□□ 1.56
SLC25A39-217ENST00000593166 DIP2BQ9P265 1576 aa24.78■■□□□ 1.56
SLC25A39-217ENST00000593166 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
SLC25A39-217ENST00000593166 PLEKHD1A6NEE1 506 aa24.75■■□□□ 1.55
SLC25A39-217ENST00000593166 GLI2P10070 1586 aa24.73■■□□□ 1.55
SLC25A39-217ENST00000593166 CDK11AQ9UQ88 783 aaPredicted RBP24.73■■□□□ 1.55
SLC25A39-217ENST00000593166 KIF13AQ9H1H9 1805 aa24.71■■□□□ 1.55
SLC25A39-217ENST00000593166 FAM69CQ0P6D2 419 aa24.71■■□□□ 1.55
SLC25A39-217ENST00000593166 TROQ12816 1431 aaPredicted RBP24.68■■□□□ 1.54
SLC25A39-217ENST00000593166 KCNH8Q96L42 1107 aa24.67■■□□□ 1.54
SLC25A39-217ENST00000593166 MAP3K1Q13233 1512 aa24.65■■□□□ 1.54
SLC25A39-217ENST00000593166 CFAP43Q8NDM7 1665 aa24.64■■□□□ 1.53
SLC25A39-217ENST00000593166 MAGI3Q5TCQ9 1506 aa24.64■■□□□ 1.53
SLC25A39-217ENST00000593166 TIAM1Q13009 1591 aa24.63■■□□□ 1.53
SLC25A39-217ENST00000593166 ABCA9Q8IUA7 1624 aa24.61■■□□□ 1.53
SLC25A39-217ENST00000593166 MAP3K4Q9Y6R4 1608 aa24.6■■□□□ 1.53
SLC25A39-217ENST00000593166 MTUS2Q5JR59 1369 aa24.57■■□□□ 1.52
SLC25A39-217ENST00000593166 EHBP1L1Q8N3D4 1523 aa24.57■■□□□ 1.52
SLC25A39-217ENST00000593166 KIF14Q15058 1648 aa24.57■■□□□ 1.52
SLC25A39-217ENST00000593166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.56■■□□□ 1.52
SLC25A39-217ENST00000593166 CD109Q6YHK3 1445 aa24.55■■□□□ 1.52
SLC25A39-217ENST00000593166 APLP2Q06481 763 aa24.54■■□□□ 1.52
SLC25A39-217ENST00000593166 LRRC9Q6ZRR7 1453 aa24.52■■□□□ 1.52
SLC25A39-217ENST00000593166 TTC37Q6PGP7 1564 aa24.52■■□□□ 1.52
SLC25A39-217ENST00000593166 PPRC1Q5VV67 1664 aaKnown RBP24.5■■□□□ 1.51
SLC25A39-217ENST00000593166 TEX14Q8IWB6 1497 aa24.48■■□□□ 1.51
SLC25A39-217ENST00000593166 TSPOAP1O95153 1857 aa24.47■■□□□ 1.51
SLC25A39-217ENST00000593166 KANK4Q5T7N3 995 aaPredicted RBP24.46■■□□□ 1.51
SLC25A39-217ENST00000593166 ARAP3Q8WWN8 1544 aa24.44■■□□□ 1.5
SLC25A39-217ENST00000593166 PLCH2O75038 1416 aa24.44■■□□□ 1.5
SLC25A39-217ENST00000593166 SUPT6HQ7KZ85 1726 aaKnown RBP24.42■■□□□ 1.5
SLC25A39-217ENST00000593166 NCOA2Q15596 1464 aa24.41■■□□□ 1.5
SLC25A39-217ENST00000593166 MYO5CQ9NQX4 1742 aa24.41■■□□□ 1.5
SLC25A39-217ENST00000593166 NEO1Q92859 1461 aa24.38■■□□□ 1.49
SLC25A39-217ENST00000593166 GPATCH8Q9UKJ3 1502 aaKnown RBP24.38■■□□□ 1.49
SLC25A39-217ENST00000593166 PHLDB1Q86UU1 1377 aa24.38■■□□□ 1.49
SLC25A39-217ENST00000593166 PREX2Q70Z35 1606 aa24.37■■□□□ 1.49
SLC25A39-217ENST00000593166 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
SLC25A39-217ENST00000593166 FANCAO15360 1455 aa24.36■■□□□ 1.49
SLC25A39-217ENST00000593166 CDC42BPAQ5VT25 1732 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms