RNA–Protein interactions for RNA: ENST00000592864.2

CACNA1A-211, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3 BASIC

Gene CACNA1A, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-211ENST00000592864 NUP160Q12769 1436 aa22.73■■□□□ 1.23
CACNA1A-211ENST00000592864 GOLGA3Q08378 1498 aa22.72■■□□□ 1.23
CACNA1A-211ENST00000592864 CEP170Q5SW79 1584 aa22.7■■□□□ 1.22
CACNA1A-211ENST00000592864 UBTFP17480 764 aaKnown RBP22.66■■□□□ 1.22
CACNA1A-211ENST00000592864 KIAA0586Q9BVV6 1533 aa22.66■■□□□ 1.22
CACNA1A-211ENST00000592864 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
CACNA1A-211ENST00000592864 ARHGEF11O15085 1522 aa22.64■■□□□ 1.22
CACNA1A-211ENST00000592864 EHMT2Q96KQ7 1210 aa22.64■■□□□ 1.21
CACNA1A-211ENST00000592864 CLASP1Q7Z460 1538 aa22.63■■□□□ 1.21
CACNA1A-211ENST00000592864 IQGAP2Q13576 1575 aa22.59■■□□□ 1.21
CACNA1A-211ENST00000592864 JPH4Q96JJ6 628 aa22.56■■□□□ 1.2
CACNA1A-211ENST00000592864 LOC105371045A0A1W2PR82 267 aa22.53■■□□□ 1.2
CACNA1A-211ENST00000592864 TNIKQ9UKE5 1360 aa22.53■■□□□ 1.2
CACNA1A-211ENST00000592864 SHROOM2Q13796 1616 aa22.51■■□□□ 1.19
CACNA1A-211ENST00000592864 CYB5RLQ6IPT4 315 aa22.49■■□□□ 1.19
CACNA1A-211ENST00000592864 UGGT2Q9NYU1 1516 aa22.47■■□□□ 1.19
CACNA1A-211ENST00000592864 PRG4Q92954 1404 aaPredicted RBP22.44■■□□□ 1.18
CACNA1A-211ENST00000592864 CARMIL2Q6F5E8 1435 aa22.44■■□□□ 1.18
CACNA1A-211ENST00000592864 ARAP1Q96P48 1450 aa22.44■■□□□ 1.18
CACNA1A-211ENST00000592864 RANGAP1P46060 587 aaPredicted RBP22.39■■□□□ 1.18
CACNA1A-211ENST00000592864 EFCAB5A4FU69 1503 aa22.36■■□□□ 1.17
CACNA1A-211ENST00000592864 DISP1Q96F81 1524 aa22.36■■□□□ 1.17
CACNA1A-211ENST00000592864 SAMD9Q5K651 1589 aa22.35■■□□□ 1.17
CACNA1A-211ENST00000592864 KIAA0556O60303 1618 aa22.34■■□□□ 1.17
CACNA1A-211ENST00000592864 ERCC6L2Q5T890 1561 aa22.31■■□□□ 1.16
CACNA1A-211ENST00000592864 CLIP1P30622 1438 aa22.31■■□□□ 1.16
CACNA1A-211ENST00000592864 CEP162Q5TB80 1403 aa22.3■■□□□ 1.16
CACNA1A-211ENST00000592864 TRHP20396 242 aaPredicted RBP22.28■■□□□ 1.16
CACNA1A-211ENST00000592864 P3H3Q8IVL6 736 aa22.28■■□□□ 1.16
CACNA1A-211ENST00000592864 ARHGAP35Q9NRY4 1499 aa22.27■■□□□ 1.16
CACNA1A-211ENST00000592864 PTPRGP23470 1445 aa22.25■■□□□ 1.15
CACNA1A-211ENST00000592864 FHOD3Q2V2M9 1422 aa22.21■■□□□ 1.15
CACNA1A-211ENST00000592864 TTBK1Q5TCY1 1321 aaPredicted RBP22.2■■□□□ 1.14
CACNA1A-211ENST00000592864 FMN1Q68DA7 1419 aa22.17■■□□□ 1.14
CACNA1A-211ENST00000592864 UACAQ9BZF9 1416 aa22.11■■□□□ 1.13
CACNA1A-211ENST00000592864 ABCA8O94911 1581 aa22.08■■□□□ 1.12
CACNA1A-211ENST00000592864 RAPGEF6Q8TEU7 1601 aa22.07■■□□□ 1.12
CACNA1A-211ENST00000592864 UHRF1BP1LA0JNW5 1464 aa22.07■■□□□ 1.12
CACNA1A-211ENST00000592864 PLB1Q6P1J6 1458 aa22.06■■□□□ 1.12
CACNA1A-211ENST00000592864 ABCC2Q92887 1545 aa22.04■■□□□ 1.12
CACNA1A-211ENST00000592864 VPS8Q8N3P4 1428 aa22.02■■□□□ 1.12
CACNA1A-211ENST00000592864 NPM1P06748 294 aaKnown RBP eCLIP22.02■■□□□ 1.11
CACNA1A-211ENST00000592864 CASKIN1Q8WXD9 1431 aa22.02■■□□□ 1.11
CACNA1A-211ENST00000592864 ADCY10Q96PN6 1610 aa22.01■■□□□ 1.11
CACNA1A-211ENST00000592864 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
CACNA1A-211ENST00000592864 HECW1Q76N89 1606 aa22■■□□□ 1.11
CACNA1A-211ENST00000592864 FYCO1Q9BQS8 1478 aa21.99■■□□□ 1.11
CACNA1A-211ENST00000592864 PCF11O94913 1555 aaKnown RBP21.96■■□□□ 1.11
CACNA1A-211ENST00000592864 NUP153P49790 1475 aaKnown RBP21.95■■□□□ 1.1
CACNA1A-211ENST00000592864 KDM5BQ9UGL1 1544 aa21.94■■□□□ 1.1
CACNA1A-211ENST00000592864 ATP10BO94823 1461 aa21.91■■□□□ 1.1
CACNA1A-211ENST00000592864 CCDC18Q5T9S5 1454 aa21.91■■□□□ 1.1
CACNA1A-211ENST00000592864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
CACNA1A-211ENST00000592864 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
CACNA1A-211ENST00000592864 ZCCHC11Q5TAX3 1644 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-211ENST00000592864 EPRSP07814 1512 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-211ENST00000592864 APLP2Q06481 763 aa21.88■■□□□ 1.09
CACNA1A-211ENST00000592864 ARID3CA6NKF2 412 aa21.88■■□□□ 1.09
CACNA1A-211ENST00000592864 CDK11AQ9UQ88 783 aaPredicted RBP21.88■■□□□ 1.09
CACNA1A-211ENST00000592864 LRRIQ1Q96JM4 1722 aa21.86■■□□□ 1.09
CACNA1A-211ENST00000592864 PLEKHD1A6NEE1 506 aa21.84■■□□□ 1.09
CACNA1A-211ENST00000592864 CDK13Q14004 1512 aaKnown RBP21.83■■□□□ 1.09
CACNA1A-211ENST00000592864 MAPKBP1O60336 1514 aa21.82■■□□□ 1.08
CACNA1A-211ENST00000592864 MAP3K1Q13233 1512 aa21.82■■□□□ 1.08
CACNA1A-211ENST00000592864 ASXL2Q76L83 1435 aa21.79■■□□□ 1.08
CACNA1A-211ENST00000592864 CFAP43Q8NDM7 1665 aa21.78■■□□□ 1.08
CACNA1A-211ENST00000592864 TIAM1Q13009 1591 aa21.77■■□□□ 1.08
CACNA1A-211ENST00000592864 WDR7Q9Y4E6 1490 aa21.75■■□□□ 1.07
CACNA1A-211ENST00000592864 MTUS2Q5JR59 1369 aa21.72■■□□□ 1.07
CACNA1A-211ENST00000592864 TROQ12816 1431 aaPredicted RBP21.71■■□□□ 1.07
CACNA1A-211ENST00000592864 KCNH8Q96L42 1107 aa21.7■■□□□ 1.06
CACNA1A-211ENST00000592864 LRRC9Q6ZRR7 1453 aa21.68■■□□□ 1.06
CACNA1A-211ENST00000592864 EHBP1L1Q8N3D4 1523 aa21.67■■□□□ 1.06
CACNA1A-211ENST00000592864 KIF13AQ9H1H9 1805 aa21.67■■□□□ 1.06
CACNA1A-211ENST00000592864 ABCC10Q5T3U5 1492 aa21.66■■□□□ 1.06
CACNA1A-211ENST00000592864 MAGI3Q5TCQ9 1506 aa21.65■■□□□ 1.06
CACNA1A-211ENST00000592864 KANK4Q5T7N3 995 aaPredicted RBP21.64■■□□□ 1.05
CACNA1A-211ENST00000592864 KIF14Q15058 1648 aa21.64■■□□□ 1.05
CACNA1A-211ENST00000592864 GLI2P10070 1586 aa21.63■■□□□ 1.05
CACNA1A-211ENST00000592864 FAM69CQ0P6D2 419 aa21.62■■□□□ 1.05
CACNA1A-211ENST00000592864 DIP2BQ9P265 1576 aa21.61■■□□□ 1.05
CACNA1A-211ENST00000592864 SUPT6HQ7KZ85 1726 aaKnown RBP21.61■■□□□ 1.05
CACNA1A-211ENST00000592864 ABCA9Q8IUA7 1624 aa21.58■■□□□ 1.04
CACNA1A-211ENST00000592864 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.57■■□□□ 1.04
CACNA1A-211ENST00000592864 NCOA2Q15596 1464 aa21.53■■□□□ 1.04
CACNA1A-211ENST00000592864 MAP3K4Q9Y6R4 1608 aa21.53■■□□□ 1.04
CACNA1A-211ENST00000592864 CD109Q6YHK3 1445 aa21.52■■□□□ 1.04
CACNA1A-211ENST00000592864 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.04
CACNA1A-211ENST00000592864 TTC37Q6PGP7 1564 aa21.51■■□□□ 1.03
CACNA1A-211ENST00000592864 MYO5CQ9NQX4 1742 aa21.51■■□□□ 1.03
CACNA1A-211ENST00000592864 PPARGC1BQ86YN6 1023 aaKnown RBP21.51■■□□□ 1.03
CACNA1A-211ENST00000592864 PLCH2O75038 1416 aa21.47■■□□□ 1.03
CACNA1A-211ENST00000592864 ITSN2Q9NZM3 1697 aa21.47■■□□□ 1.03
CACNA1A-211ENST00000592864 CDC42BPAQ5VT25 1732 aa21.47■■□□□ 1.03
CACNA1A-211ENST00000592864 TSPOAP1O95153 1857 aa21.46■■□□□ 1.03
CACNA1A-211ENST00000592864 ARAP3Q8WWN8 1544 aa21.46■■□□□ 1.03
CACNA1A-211ENST00000592864 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
CACNA1A-211ENST00000592864 PREX2Q70Z35 1606 aa21.44■■□□□ 1.02
CACNA1A-211ENST00000592864 TEX14Q8IWB6 1497 aa21.44■■□□□ 1.02
CACNA1A-211ENST00000592864 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms