RNA–Protein interactions for RNA: ENST00000592573.1

RDH13-221, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 1,481 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-221ENST00000592573 KIAA0586Q9BVV6 1533 aa29.1■■■□□ 2.25
RDH13-221ENST00000592573 GOLGA3Q08378 1498 aa29.09■■■□□ 2.25
RDH13-221ENST00000592573 UBTFP17480 764 aaKnown RBP29.09■■■□□ 2.25
RDH13-221ENST00000592573 LOC105371045A0A1W2PR82 267 aa29.04■■■□□ 2.24
RDH13-221ENST00000592573 JPH4Q96JJ6 628 aa29.04■■■□□ 2.24
RDH13-221ENST00000592573 RANGAP1P46060 587 aaPredicted RBP29.03■■■□□ 2.24
RDH13-221ENST00000592573 IQGAP2Q13576 1575 aa29.01■■■□□ 2.23
RDH13-221ENST00000592573 CTTNBP2Q8WZ74 1663 aa28.98■■■□□ 2.23
RDH13-221ENST00000592573 ERCC6L2Q5T890 1561 aa28.96■■■□□ 2.23
RDH13-221ENST00000592573 PRG4Q92954 1404 aaPredicted RBP28.95■■■□□ 2.22
RDH13-221ENST00000592573 SHROOM2Q13796 1616 aa28.94■■■□□ 2.22
RDH13-221ENST00000592573 ARHGEF11O15085 1522 aa28.93■■■□□ 2.22
RDH13-221ENST00000592573 RIMBP3CA6NJZ7 1639 aa28.88■■■□□ 2.21
RDH13-221ENST00000592573 RIMBP3BA6NNM3 1639 aa28.88■■■□□ 2.21
RDH13-221ENST00000592573 RIMBP3Q9UFD9 1639 aa28.88■■■□□ 2.21
RDH13-221ENST00000592573 TTBK1Q5TCY1 1321 aaPredicted RBP28.85■■■□□ 2.21
RDH13-221ENST00000592573 UGGT2Q9NYU1 1516 aa28.84■■■□□ 2.21
RDH13-221ENST00000592573 P3H3Q8IVL6 736 aa28.83■■■□□ 2.21
RDH13-221ENST00000592573 DISP1Q96F81 1524 aa28.81■■■□□ 2.2
RDH13-221ENST00000592573 TNIKQ9UKE5 1360 aa28.8■■■□□ 2.2
RDH13-221ENST00000592573 CARMIL2Q6F5E8 1435 aa28.76■■■□□ 2.2
RDH13-221ENST00000592573 ARAP1Q96P48 1450 aa28.76■■■□□ 2.19
RDH13-221ENST00000592573 CYB5RLQ6IPT4 315 aa28.74■■■□□ 2.19
RDH13-221ENST00000592573 KIAA0556O60303 1618 aa28.73■■■□□ 2.19
RDH13-221ENST00000592573 FHOD3Q2V2M9 1422 aa28.66■■■□□ 2.18
RDH13-221ENST00000592573 SAMD9Q5K651 1589 aa28.66■■■□□ 2.18
RDH13-221ENST00000592573 PTPRGP23470 1445 aa28.64■■■□□ 2.18
RDH13-221ENST00000592573 ARHGAP35Q9NRY4 1499 aa28.63■■■□□ 2.17
RDH13-221ENST00000592573 CLIP1P30622 1438 aa28.62■■■□□ 2.17
RDH13-221ENST00000592573 CEP162Q5TB80 1403 aa28.62■■■□□ 2.17
RDH13-221ENST00000592573 EFCAB5A4FU69 1503 aa28.59■■■□□ 2.17
RDH13-221ENST00000592573 PLB1Q6P1J6 1458 aa28.49■■■□□ 2.15
RDH13-221ENST00000592573 ARID3CA6NKF2 412 aa28.44■■■□□ 2.14
RDH13-221ENST00000592573 UACAQ9BZF9 1416 aa28.44■■■□□ 2.14
RDH13-221ENST00000592573 ADCY10Q96PN6 1610 aa28.41■■■□□ 2.14
RDH13-221ENST00000592573 ABCA8O94911 1581 aa28.38■■■□□ 2.13
RDH13-221ENST00000592573 ATP1B4Q9UN42 357 aaPredicted RBP28.38■■■□□ 2.13
RDH13-221ENST00000592573 ABCC2Q92887 1545 aa28.36■■■□□ 2.13
RDH13-221ENST00000592573 FMN1Q68DA7 1419 aa28.35■■■□□ 2.13
RDH13-221ENST00000592573 UHRF1BP1LA0JNW5 1464 aa28.33■■■□□ 2.13
RDH13-221ENST00000592573 RAPGEF6Q8TEU7 1601 aa28.32■■■□□ 2.12
RDH13-221ENST00000592573 NPM1P06748 294 aaKnown RBP eCLIP28.27■■■□□ 2.12
RDH13-221ENST00000592573 NUP153P49790 1475 aaKnown RBP28.27■■■□□ 2.12
RDH13-221ENST00000592573 PCF11O94913 1555 aaKnown RBP28.26■■■□□ 2.12
RDH13-221ENST00000592573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.22■■■□□ 2.11
RDH13-221ENST00000592573 HNRNPUL2Q1KMD3 747 aaKnown RBP28.22■■■□□ 2.11
RDH13-221ENST00000592573 CASKIN1Q8WXD9 1431 aa28.21■■■□□ 2.11
RDH13-221ENST00000592573 KDM5BQ9UGL1 1544 aa28.21■■■□□ 2.11
RDH13-221ENST00000592573 ATP10BO94823 1461 aa28.21■■■□□ 2.11
RDH13-221ENST00000592573 VPS8Q8N3P4 1428 aa28.19■■■□□ 2.1
RDH13-221ENST00000592573 ZCCHC11Q5TAX3 1644 aaKnown RBP28.19■■■□□ 2.1
RDH13-221ENST00000592573 CDK13Q14004 1512 aaKnown RBP28.18■■■□□ 2.1
RDH13-221ENST00000592573 HECW1Q76N89 1606 aa28.17■■■□□ 2.1
RDH13-221ENST00000592573 FYCO1Q9BQS8 1478 aa28.15■■■□□ 2.1
RDH13-221ENST00000592573 EPRSP07814 1512 aaKnown RBP28.13■■■□□ 2.09
RDH13-221ENST00000592573 ASXL2Q76L83 1435 aa28.11■■■□□ 2.09
RDH13-221ENST00000592573 LRRIQ1Q96JM4 1722 aa28.09■■■□□ 2.09
RDH13-221ENST00000592573 MAPKBP1O60336 1514 aa28.06■■■□□ 2.08
RDH13-221ENST00000592573 KCNH8Q96L42 1107 aa28.04■■■□□ 2.08
RDH13-221ENST00000592573 TRHP20396 242 aaPredicted RBP28.02■■■□□ 2.08
RDH13-221ENST00000592573 CCDC18Q5T9S5 1454 aa28.01■■■□□ 2.07
RDH13-221ENST00000592573 WDR7Q9Y4E6 1490 aa28.01■■■□□ 2.07
RDH13-221ENST00000592573 PLEKHD1A6NEE1 506 aa27.99■■■□□ 2.07
RDH13-221ENST00000592573 FAM69CQ0P6D2 419 aa27.95■■■□□ 2.07
RDH13-221ENST00000592573 MAGI3Q5TCQ9 1506 aa27.95■■■□□ 2.06
RDH13-221ENST00000592573 CDK11AQ9UQ88 783 aaPredicted RBP27.93■■■□□ 2.06
RDH13-221ENST00000592573 ABCC10Q5T3U5 1492 aa27.92■■■□□ 2.06
RDH13-221ENST00000592573 APLP2Q06481 763 aa27.89■■■□□ 2.06
RDH13-221ENST00000592573 TIAM1Q13009 1591 aa27.89■■■□□ 2.06
RDH13-221ENST00000592573 DIP2BQ9P265 1576 aa27.89■■■□□ 2.06
RDH13-221ENST00000592573 KANK4Q5T7N3 995 aaPredicted RBP27.89■■■□□ 2.05
RDH13-221ENST00000592573 TROQ12816 1431 aaPredicted RBP27.87■■■□□ 2.05
RDH13-221ENST00000592573 CFAP43Q8NDM7 1665 aa27.87■■■□□ 2.05
RDH13-221ENST00000592573 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
RDH13-221ENST00000592573 PPARGC1BQ86YN6 1023 aaKnown RBP27.83■■■□□ 2.05
RDH13-221ENST00000592573 KIF14Q15058 1648 aa27.82■■■□□ 2.04
RDH13-221ENST00000592573 KIF13AQ9H1H9 1805 aa27.82■■■□□ 2.04
RDH13-221ENST00000592573 LRRC9Q6ZRR7 1453 aa27.79■■■□□ 2.04
RDH13-221ENST00000592573 MAP3K1Q13233 1512 aa27.78■■■□□ 2.04
RDH13-221ENST00000592573 GLI2P10070 1586 aa27.77■■■□□ 2.04
RDH13-221ENST00000592573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.76■■■□□ 2.03
RDH13-221ENST00000592573 EHBP1L1Q8N3D4 1523 aa27.75■■■□□ 2.03
RDH13-221ENST00000592573 TTC37Q6PGP7 1564 aa27.75■■■□□ 2.03
RDH13-221ENST00000592573 CD109Q6YHK3 1445 aa27.73■■■□□ 2.03
RDH13-221ENST00000592573 ABCA9Q8IUA7 1624 aa27.71■■■□□ 2.03
RDH13-221ENST00000592573 MAP3K4Q9Y6R4 1608 aa27.69■■■□□ 2.02
RDH13-221ENST00000592573 TSPOAP1O95153 1857 aa27.69■■■□□ 2.02
RDH13-221ENST00000592573 NCOA2Q15596 1464 aa27.65■■■□□ 2.02
RDH13-221ENST00000592573 SUPT6HQ7KZ85 1726 aaKnown RBP27.61■■■□□ 2.01
RDH13-221ENST00000592573 CCNB3Q8WWL7 1395 aa27.61■■■□□ 2.01
RDH13-221ENST00000592573 PPRC1Q5VV67 1664 aaKnown RBP27.61■■■□□ 2.01
RDH13-221ENST00000592573 PLCH2O75038 1416 aa27.58■■■□□ 2.01
RDH13-221ENST00000592573 GPATCH8Q9UKJ3 1502 aaKnown RBP27.57■■■□□ 2
RDH13-221ENST00000592573 ARHGAP5Q13017 1502 aa27.54■■■□□ 2
RDH13-221ENST00000592573 PHLDB1Q86UU1 1377 aa27.54■■■□□ 2
RDH13-221ENST00000592573 ZNF777Q9ULD5 760 aaPredicted RBP27.54■■■□□ 2
RDH13-221ENST00000592573 MYO5CQ9NQX4 1742 aa27.54■■■□□ 2
RDH13-221ENST00000592573 CDC42BPAQ5VT25 1732 aa27.52■■■□□ 2
RDH13-221ENST00000592573 FANCAO15360 1455 aa27.52■■■□□ 2
RDH13-221ENST00000592573 CFDP1Q9UEE9 299 aaPredicted RBP27.51■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms