RNA–Protein interactions for RNA: ENST00000591974.5

LINC01539-205, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-205ENST00000591974 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
LINC01539-205ENST00000591974 EFCAB5A4FU69 1503 aa16.59■□□□□ 0.25
LINC01539-205ENST00000591974 RANGAP1P46060 587 aaPredicted RBP16.59■□□□□ 0.25
LINC01539-205ENST00000591974 SYNJ2O15056 1496 aa16.58■□□□□ 0.25
LINC01539-205ENST00000591974 GRIN2AQ12879 1464 aa16.58■□□□□ 0.24
LINC01539-205ENST00000591974 IQGAP2Q13576 1575 aa16.55■□□□□ 0.24
LINC01539-205ENST00000591974 SAMD9Q5K651 1589 aa16.53■□□□□ 0.24
LINC01539-205ENST00000591974 KIAA0586Q9BVV6 1533 aa16.49■□□□□ 0.23
LINC01539-205ENST00000591974 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
LINC01539-205ENST00000591974 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
LINC01539-205ENST00000591974 UGGT2Q9NYU1 1516 aa16.46■□□□□ 0.23
LINC01539-205ENST00000591974 NUP160Q12769 1436 aa16.46■□□□□ 0.23
LINC01539-205ENST00000591974 CHD1O14646 1710 aa16.46■□□□□ 0.22
LINC01539-205ENST00000591974 TRIM26Q12899 539 aaPredicted RBP16.45■□□□□ 0.22
LINC01539-205ENST00000591974 FHOD3Q2V2M9 1422 aa16.44■□□□□ 0.22
LINC01539-205ENST00000591974 FMN1Q68DA7 1419 aa16.41■□□□□ 0.22
LINC01539-205ENST00000591974 FBLN2P98095 1184 aa16.41■□□□□ 0.22
LINC01539-205ENST00000591974 APLP2Q06481 763 aa16.41■□□□□ 0.22
LINC01539-205ENST00000591974 PCF11O94913 1555 aaKnown RBP16.4■□□□□ 0.22
LINC01539-205ENST00000591974 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
LINC01539-205ENST00000591974 P3H3Q8IVL6 736 aa16.38■□□□□ 0.21
LINC01539-205ENST00000591974 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
LINC01539-205ENST00000591974 KIAA0556O60303 1618 aa16.38■□□□□ 0.21
LINC01539-205ENST00000591974 MAP3K1Q13233 1512 aa16.38■□□□□ 0.21
LINC01539-205ENST00000591974 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
LINC01539-205ENST00000591974 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
LINC01539-205ENST00000591974 CFAP43Q8NDM7 1665 aa16.35■□□□□ 0.21
LINC01539-205ENST00000591974 DISP1Q96F81 1524 aa16.35■□□□□ 0.21
LINC01539-205ENST00000591974 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
LINC01539-205ENST00000591974 SHROOM2Q13796 1616 aa16.28■□□□□ 0.2
LINC01539-205ENST00000591974 CARMIL2Q6F5E8 1435 aa16.28■□□□□ 0.2
LINC01539-205ENST00000591974 LRRIQ1Q96JM4 1722 aa16.28■□□□□ 0.2
LINC01539-205ENST00000591974 JPH4Q96JJ6 628 aa16.28■□□□□ 0.2
LINC01539-205ENST00000591974 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
LINC01539-205ENST00000591974 TTBK1Q5TCY1 1321 aaPredicted RBP16.26■□□□□ 0.19
LINC01539-205ENST00000591974 KANK4Q5T7N3 995 aaPredicted RBP16.25■□□□□ 0.19
LINC01539-205ENST00000591974 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
LINC01539-205ENST00000591974 LRRC9Q6ZRR7 1453 aa16.24■□□□□ 0.19
LINC01539-205ENST00000591974 CCDC18Q5T9S5 1454 aa16.23■□□□□ 0.19
LINC01539-205ENST00000591974 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
LINC01539-205ENST00000591974 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
LINC01539-205ENST00000591974 PRG4Q92954 1404 aaPredicted RBP16.2■□□□□ 0.18
LINC01539-205ENST00000591974 EPRSP07814 1512 aaKnown RBP16.17■□□□□ 0.18
LINC01539-205ENST00000591974 EHBP1L1Q8N3D4 1523 aa16.15■□□□□ 0.18
LINC01539-205ENST00000591974 NUP153P49790 1475 aaKnown RBP16.14■□□□□ 0.17
LINC01539-205ENST00000591974 ABCA8O94911 1581 aa16.13■□□□□ 0.17
LINC01539-205ENST00000591974 PLB1Q6P1J6 1458 aa16.12■□□□□ 0.17
LINC01539-205ENST00000591974 RRBP1Q9P2E9 1410 aaKnown RBP16.12■□□□□ 0.17
LINC01539-205ENST00000591974 CDK13Q14004 1512 aaKnown RBP16.12■□□□□ 0.17
LINC01539-205ENST00000591974 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
LINC01539-205ENST00000591974 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
LINC01539-205ENST00000591974 PTPRGP23470 1445 aa16.09■□□□□ 0.17
LINC01539-205ENST00000591974 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
LINC01539-205ENST00000591974 MAGI3Q5TCQ9 1506 aa16.09■□□□□ 0.17
LINC01539-205ENST00000591974 PHLDB1Q86UU1 1377 aa16.06■□□□□ 0.16
LINC01539-205ENST00000591974 ARHGEF11O15085 1522 aa16.05■□□□□ 0.16
LINC01539-205ENST00000591974 CCNB3Q8WWL7 1395 aa16.05■□□□□ 0.16
LINC01539-205ENST00000591974 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
LINC01539-205ENST00000591974 NCOA2Q15596 1464 aa16.04■□□□□ 0.16
LINC01539-205ENST00000591974 CDK11AQ9UQ88 783 aaPredicted RBP16.02■□□□□ 0.16
LINC01539-205ENST00000591974 UACAQ9BZF9 1416 aa16.02■□□□□ 0.16
LINC01539-205ENST00000591974 ABCC2Q92887 1545 aa16■□□□□ 0.15
LINC01539-205ENST00000591974 ADCY10Q96PN6 1610 aa16■□□□□ 0.15
LINC01539-205ENST00000591974 ATP10BO94823 1461 aa15.99■□□□□ 0.15
LINC01539-205ENST00000591974 MYOM3Q5VTT5 1437 aa15.99■□□□□ 0.15
LINC01539-205ENST00000591974 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
LINC01539-205ENST00000591974 TROQ12816 1431 aaPredicted RBP15.98■□□□□ 0.15
LINC01539-205ENST00000591974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.98■□□□□ 0.15
LINC01539-205ENST00000591974 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
LINC01539-205ENST00000591974 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
LINC01539-205ENST00000591974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
LINC01539-205ENST00000591974 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
LINC01539-205ENST00000591974 KIF14Q15058 1648 aa15.93■□□□□ 0.14
LINC01539-205ENST00000591974 PTPN23Q9H3S7 1636 aa15.93■□□□□ 0.14
LINC01539-205ENST00000591974 ITSN2Q9NZM3 1697 aa15.92■□□□□ 0.14
LINC01539-205ENST00000591974 MIA2Q96PC5 1412 aa15.92■□□□□ 0.14
LINC01539-205ENST00000591974 PLEKHD1A6NEE1 506 aa15.91■□□□□ 0.14
LINC01539-205ENST00000591974 HRCP23327 699 aa15.91■□□□□ 0.14
LINC01539-205ENST00000591974 ZCCHC11Q5TAX3 1644 aaKnown RBP15.9■□□□□ 0.14
LINC01539-205ENST00000591974 TCOF1Q13428 1488 aaKnown RBP15.9■□□□□ 0.14
LINC01539-205ENST00000591974 KDM5BQ9UGL1 1544 aa15.9■□□□□ 0.14
LINC01539-205ENST00000591974 FAM50AQ14320 339 aaKnown RBP15.88■□□□□ 0.13
LINC01539-205ENST00000591974 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
LINC01539-205ENST00000591974 CDC42BPAQ5VT25 1732 aa15.86■□□□□ 0.13
LINC01539-205ENST00000591974 ABCC10Q5T3U5 1492 aa15.85■□□□□ 0.13
LINC01539-205ENST00000591974 GPATCH8Q9UKJ3 1502 aaKnown RBP15.83■□□□□ 0.13
LINC01539-205ENST00000591974 ITGAEP38570 1179 aa15.81■□□□□ 0.12
LINC01539-205ENST00000591974 PREX2Q70Z35 1606 aa15.79■□□□□ 0.12
LINC01539-205ENST00000591974 ZEB1P37275 1124 aaPredicted RBP15.78■□□□□ 0.12
LINC01539-205ENST00000591974 CDC42BPBQ9Y5S2 1711 aa15.78■□□□□ 0.12
LINC01539-205ENST00000591974 DNMT1P26358 1616 aaKnown RBP15.78■□□□□ 0.12
LINC01539-205ENST00000591974 MYO5CQ9NQX4 1742 aa15.77■□□□□ 0.12
LINC01539-205ENST00000591974 TTC37Q6PGP7 1564 aa15.77■□□□□ 0.12
LINC01539-205ENST00000591974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.77■□□□□ 0.12
LINC01539-205ENST00000591974 CAMSAP2Q08AD1 1489 aa15.77■□□□□ 0.12
LINC01539-205ENST00000591974 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.11
LINC01539-205ENST00000591974 CFDP1Q9UEE9 299 aaPredicted RBP15.76■□□□□ 0.11
LINC01539-205ENST00000591974 SETD5Q9C0A6 1442 aa15.76■□□□□ 0.11
LINC01539-205ENST00000591974 PTPRKQ15262 1439 aa15.75■□□□□ 0.11
LINC01539-205ENST00000591974 RIMBP3CA6NJZ7 1639 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms