RNA–Protein interactions for RNA: ENST00000591893.1

H3F3B-211, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 2,787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-211ENST00000591893 SETD5Q9C0A6 1442 aa25.04■■□□□ 1.6
H3F3B-211ENST00000591893 ARHGAP35Q9NRY4 1499 aa25.03■■□□□ 1.6
H3F3B-211ENST00000591893 MSH5O43196 834 aa25.01■■□□□ 1.59
H3F3B-211ENST00000591893 SIN3AQ96ST3 1273 aa25■■□□□ 1.59
H3F3B-211ENST00000591893 ANP32CO43423 234 aa24.99■■□□□ 1.59
H3F3B-211ENST00000591893 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
H3F3B-211ENST00000591893 TIMELESSQ9UNS1 1208 aa24.95■■□□□ 1.58
H3F3B-211ENST00000591893 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
H3F3B-211ENST00000591893 FANCIQ9NVI1 1328 aa24.91■■□□□ 1.58
H3F3B-211ENST00000591893 TIAM1Q13009 1591 aa24.91■■□□□ 1.58
H3F3B-211ENST00000591893 HIRIP3Q9BW71 556 aaPredicted RBP24.91■■□□□ 1.58
H3F3B-211ENST00000591893 MAP3K1Q13233 1512 aa24.89■■□□□ 1.58
H3F3B-211ENST00000591893 CUX1P39880 1505 aa24.85■■□□□ 1.57
H3F3B-211ENST00000591893 CC2D2AQ9P2K1 1620 aa24.84■■□□□ 1.57
H3F3B-211ENST00000591893 PHLDB1Q86UU1 1377 aa24.82■■□□□ 1.56
H3F3B-211ENST00000591893 CDK11AQ9UQ88 783 aaPredicted RBP24.82■■□□□ 1.56
H3F3B-211ENST00000591893 LRRC9Q6ZRR7 1453 aa24.82■■□□□ 1.56
H3F3B-211ENST00000591893 ERICH6Q7L0X2 663 aa24.82■■□□□ 1.56
H3F3B-211ENST00000591893 FAM50AQ14320 339 aaKnown RBP24.8■■□□□ 1.56
H3F3B-211ENST00000591893 HMGXB3Q12766 1538 aa24.77■■□□□ 1.56
H3F3B-211ENST00000591893 IRX6P78412 446 aaPredicted RBP24.71■■□□□ 1.55
H3F3B-211ENST00000591893 HNRNPUQ00839 825 aaKnown RBP eCLIP24.71■■□□□ 1.55
H3F3B-211ENST00000591893 NESP48681 1621 aa24.67■■□□□ 1.54
H3F3B-211ENST00000591893 TONSLQ96HA7 1378 aa24.67■■□□□ 1.54
H3F3B-211ENST00000591893 MYT1LQ9UL68 1186 aa24.66■■□□□ 1.54
H3F3B-211ENST00000591893 CFTRP13569 1480 aa24.66■■□□□ 1.54
H3F3B-211ENST00000591893 CFAP43Q8NDM7 1665 aa24.66■■□□□ 1.54
H3F3B-211ENST00000591893 ERICH6BQ5W0A0 696 aa24.64■■□□□ 1.53
H3F3B-211ENST00000591893 CADPSQ9ULU8 1353 aa24.63■■□□□ 1.53
H3F3B-211ENST00000591893 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
H3F3B-211ENST00000591893 IGF1RP08069 1367 aa24.6■■□□□ 1.53
H3F3B-211ENST00000591893 PPP4R2Q9NY27 417 aa24.58■■□□□ 1.53
H3F3B-211ENST00000591893 PCF11O94913 1555 aaKnown RBP24.57■■□□□ 1.52
H3F3B-211ENST00000591893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.57■■□□□ 1.52
H3F3B-211ENST00000591893 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
H3F3B-211ENST00000591893 DEKP35659 375 aaKnown RBP24.52■■□□□ 1.52
H3F3B-211ENST00000591893 CCDC18Q5T9S5 1454 aa24.5■■□□□ 1.51
H3F3B-211ENST00000591893 ATP1B4Q9UN42 357 aaPredicted RBP24.49■■□□□ 1.51
H3F3B-211ENST00000591893 UACAQ9BZF9 1416 aa24.47■■□□□ 1.51
H3F3B-211ENST00000591893 P3H3Q8IVL6 736 aa24.45■■□□□ 1.5
H3F3B-211ENST00000591893 WASHC2AQ641Q2 1341 aa24.42■■□□□ 1.5
H3F3B-211ENST00000591893 KDM5BQ9UGL1 1544 aa24.42■■□□□ 1.5
H3F3B-211ENST00000591893 FYCO1Q9BQS8 1478 aa24.42■■□□□ 1.5
H3F3B-211ENST00000591893 FANCD2Q9BXW9 1451 aa24.42■■□□□ 1.5
H3F3B-211ENST00000591893 B4GALNT3Q6L9W6 998 aa24.41■■□□□ 1.5
H3F3B-211ENST00000591893 HFM1A2PYH4 1435 aa24.41■■□□□ 1.5
H3F3B-211ENST00000591893 FGD6Q6ZV73 1430 aa24.41■■□□□ 1.5
H3F3B-211ENST00000591893 PRKCSHP14314 528 aaPredicted RBP24.39■■□□□ 1.5
H3F3B-211ENST00000591893 PTPN23Q9H3S7 1636 aa24.39■■□□□ 1.5
H3F3B-211ENST00000591893 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
H3F3B-211ENST00000591893 NOP58Q9Y2X3 529 aaKnown RBP24.37■■□□□ 1.49
H3F3B-211ENST00000591893 FHOD3Q2V2M9 1422 aa24.37■■□□□ 1.49
H3F3B-211ENST00000591893 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
H3F3B-211ENST00000591893 HSPA5P11021 654 aaKnown RBP24.37■■□□□ 1.49
H3F3B-211ENST00000591893 CASKIN1Q8WXD9 1431 aa24.36■■□□□ 1.49
H3F3B-211ENST00000591893 CCDC184Q52MB2 194 aa24.36■■□□□ 1.49
H3F3B-211ENST00000591893 PTPRKQ15262 1439 aa24.35■■□□□ 1.49
H3F3B-211ENST00000591893 NCOA2Q15596 1464 aa24.34■■□□□ 1.49
H3F3B-211ENST00000591893 CNTLNQ9NXG0 1405 aa24.33■■□□□ 1.49
H3F3B-211ENST00000591893 PRDM2Q13029 1718 aa24.33■■□□□ 1.49
H3F3B-211ENST00000591893 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.48
H3F3B-211ENST00000591893 ZBED9Q6R2W3 1325 aa24.32■■□□□ 1.48
H3F3B-211ENST00000591893 NAIPQ13075 1403 aa24.31■■□□□ 1.48
H3F3B-211ENST00000591893 FAM9BQ8IZU0 186 aa24.3■■□□□ 1.48
H3F3B-211ENST00000591893 NBR1Q14596 966 aa24.29■■□□□ 1.48
H3F3B-211ENST00000591893 EFCAB5A4FU69 1503 aa24.29■■□□□ 1.48
H3F3B-211ENST00000591893 EIF4G2P78344 907 aaKnown RBP eCLIP24.28■■□□□ 1.48
H3F3B-211ENST00000591893 PAK3O75914 559 aaPredicted RBP24.27■■□□□ 1.48
H3F3B-211ENST00000591893 PRKRIP1Q9H875 184 aaPredicted RBP24.27■■□□□ 1.48
H3F3B-211ENST00000591893 MRS2Q9HD23 443 aa24.25■■□□□ 1.47
H3F3B-211ENST00000591893 FMN1Q68DA7 1419 aa24.24■■□□□ 1.47
H3F3B-211ENST00000591893 MTUS2Q5JR59 1369 aa24.22■■□□□ 1.47
H3F3B-211ENST00000591893 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
H3F3B-211ENST00000591893 CCDC7Q96M83 1385 aa24.18■■□□□ 1.46
H3F3B-211ENST00000591893 NCOA1Q15788 1441 aa24.17■■□□□ 1.46
H3F3B-211ENST00000591893 MYOM3Q5VTT5 1437 aa24.16■■□□□ 1.46
H3F3B-211ENST00000591893 C11orf95C9JLR9 678 aaPredicted RBP24.16■■□□□ 1.46
H3F3B-211ENST00000591893 SNAPC4Q5SXM2 1469 aa24.15■■□□□ 1.46
H3F3B-211ENST00000591893 ANP32AP39687 249 aaKnown RBP24.14■■□□□ 1.46
H3F3B-211ENST00000591893 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.45
H3F3B-211ENST00000591893 TOPBP1Q92547 1522 aa24.14■■□□□ 1.45
H3F3B-211ENST00000591893 IPO9Q96P70 1041 aaKnown RBP24.14■■□□□ 1.45
H3F3B-211ENST00000591893 HECW1Q76N89 1606 aa24.12■■□□□ 1.45
H3F3B-211ENST00000591893 DENND4BO75064 1496 aaPredicted RBP24.12■■□□□ 1.45
H3F3B-211ENST00000591893 CTTNBP2Q8WZ74 1663 aa24.11■■□□□ 1.45
H3F3B-211ENST00000591893 RTL5Q5HYW3 569 aaPredicted RBP24.1■■□□□ 1.45
H3F3B-211ENST00000591893 SMG6Q86US8 1419 aaKnown RBP24.1■■□□□ 1.45
H3F3B-211ENST00000591893 URB2Q14146 1524 aaKnown RBP24.09■■□□□ 1.45
H3F3B-211ENST00000591893 AKNAQ7Z591 1439 aa24.09■■□□□ 1.45
H3F3B-211ENST00000591893 CCDC136Q96JN2 1154 aa24.08■■□□□ 1.44
H3F3B-211ENST00000591893 RRP7BPQ9NSQ0 103 aa24.08■■□□□ 1.44
H3F3B-211ENST00000591893 L3MBTL2Q969R5 705 aa24.07■■□□□ 1.44
H3F3B-211ENST00000591893 ZBTB47Q9UFB7 747 aaPredicted RBP24.07■■□□□ 1.44
H3F3B-211ENST00000591893 SUPT6HQ7KZ85 1726 aaKnown RBP24.07■■□□□ 1.44
H3F3B-211ENST00000591893 LRRIQ1Q96JM4 1722 aa24.06■■□□□ 1.44
H3F3B-211ENST00000591893 GCC2Q8IWJ2 1684 aa24.06■■□□□ 1.44
H3F3B-211ENST00000591893 RNF123Q5XPI4 1314 aa24.04■■□□□ 1.44
H3F3B-211ENST00000591893 NUDCQ9Y266 331 aa24.03■■□□□ 1.44
H3F3B-211ENST00000591893 CHIC2Q9UKJ5 165 aa24.01■■□□□ 1.43
H3F3B-211ENST00000591893 CUL7Q14999 1698 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms