RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 LOC105371045A0A1W2PR82 267 aa29.92■■■□□ 2.38
CROCCP3-205ENST00000591316 GOLGA3Q08378 1498 aa29.9■■■□□ 2.38
CROCCP3-205ENST00000591316 JPH4Q96JJ6 628 aa29.9■■■□□ 2.38
CROCCP3-205ENST00000591316 KIAA0586Q9BVV6 1533 aa29.89■■■□□ 2.38
CROCCP3-205ENST00000591316 CLASP1Q7Z460 1538 aa29.87■■■□□ 2.37
CROCCP3-205ENST00000591316 RANGAP1P46060 587 aaPredicted RBP29.87■■■□□ 2.37
CROCCP3-205ENST00000591316 IQGAP2Q13576 1575 aa29.76■■■□□ 2.35
CROCCP3-205ENST00000591316 CTTNBP2Q8WZ74 1663 aa29.73■■■□□ 2.35
CROCCP3-205ENST00000591316 PRG4Q92954 1404 aaPredicted RBP29.73■■■□□ 2.35
CROCCP3-205ENST00000591316 P3H3Q8IVL6 736 aa29.66■■■□□ 2.34
CROCCP3-205ENST00000591316 TTBK1Q5TCY1 1321 aaPredicted RBP29.66■■■□□ 2.34
CROCCP3-205ENST00000591316 TNIKQ9UKE5 1360 aa29.65■■■□□ 2.34
CROCCP3-205ENST00000591316 SHROOM2Q13796 1616 aa29.65■■■□□ 2.34
CROCCP3-205ENST00000591316 ARHGEF11O15085 1522 aa29.63■■■□□ 2.33
CROCCP3-205ENST00000591316 ERCC6L2Q5T890 1561 aa29.63■■■□□ 2.33
CROCCP3-205ENST00000591316 UGGT2Q9NYU1 1516 aa29.6■■■□□ 2.33
CROCCP3-205ENST00000591316 CARMIL2Q6F5E8 1435 aa29.6■■■□□ 2.33
CROCCP3-205ENST00000591316 RIMBP3CA6NJZ7 1639 aa29.56■■■□□ 2.32
CROCCP3-205ENST00000591316 RIMBP3BA6NNM3 1639 aa29.56■■■□□ 2.32
CROCCP3-205ENST00000591316 RIMBP3Q9UFD9 1639 aa29.56■■■□□ 2.32
CROCCP3-205ENST00000591316 CYB5RLQ6IPT4 315 aa29.56■■■□□ 2.32
CROCCP3-205ENST00000591316 DISP1Q96F81 1524 aa29.55■■■□□ 2.32
CROCCP3-205ENST00000591316 KIAA0556O60303 1618 aa29.45■■■□□ 2.31
CROCCP3-205ENST00000591316 PTPRGP23470 1445 aa29.45■■■□□ 2.31
CROCCP3-205ENST00000591316 ARAP1Q96P48 1450 aa29.44■■■□□ 2.3
CROCCP3-205ENST00000591316 CLIP1P30622 1438 aa29.43■■■□□ 2.3
CROCCP3-205ENST00000591316 FHOD3Q2V2M9 1422 aa29.41■■■□□ 2.3
CROCCP3-205ENST00000591316 CEP162Q5TB80 1403 aa29.41■■■□□ 2.3
CROCCP3-205ENST00000591316 ARHGAP35Q9NRY4 1499 aa29.4■■■□□ 2.3
CROCCP3-205ENST00000591316 SAMD9Q5K651 1589 aa29.39■■■□□ 2.3
CROCCP3-205ENST00000591316 EFCAB5A4FU69 1503 aa29.37■■■□□ 2.29
CROCCP3-205ENST00000591316 ATP1B4Q9UN42 357 aaPredicted RBP29.26■■■□□ 2.27
CROCCP3-205ENST00000591316 PLB1Q6P1J6 1458 aa29.23■■■□□ 2.27
CROCCP3-205ENST00000591316 UACAQ9BZF9 1416 aa29.22■■■□□ 2.27
CROCCP3-205ENST00000591316 ARID3CA6NKF2 412 aa29.21■■■□□ 2.27
CROCCP3-205ENST00000591316 FMN1Q68DA7 1419 aa29.18■■■□□ 2.26
CROCCP3-205ENST00000591316 NPM1P06748 294 aaKnown RBP eCLIP29.16■■■□□ 2.26
CROCCP3-205ENST00000591316 ABCA8O94911 1581 aa29.1■■■□□ 2.25
CROCCP3-205ENST00000591316 ADCY10Q96PN6 1610 aa29.1■■■□□ 2.25
CROCCP3-205ENST00000591316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.09■■■□□ 2.25
CROCCP3-205ENST00000591316 HNRNPUL2Q1KMD3 747 aaKnown RBP29.09■■■□□ 2.25
CROCCP3-205ENST00000591316 ABCC2Q92887 1545 aa29.08■■■□□ 2.25
CROCCP3-205ENST00000591316 UHRF1BP1LA0JNW5 1464 aa29.07■■■□□ 2.24
CROCCP3-205ENST00000591316 RAPGEF6Q8TEU7 1601 aa29.07■■■□□ 2.24
CROCCP3-205ENST00000591316 CASKIN1Q8WXD9 1431 aa29■■■□□ 2.23
CROCCP3-205ENST00000591316 NUP153P49790 1475 aaKnown RBP29■■■□□ 2.23
CROCCP3-205ENST00000591316 VPS8Q8N3P4 1428 aa28.99■■■□□ 2.23
CROCCP3-205ENST00000591316 ATP10BO94823 1461 aa28.97■■■□□ 2.23
CROCCP3-205ENST00000591316 KDM5BQ9UGL1 1544 aa28.96■■■□□ 2.23
CROCCP3-205ENST00000591316 PCF11O94913 1555 aaKnown RBP28.96■■■□□ 2.23
CROCCP3-205ENST00000591316 FYCO1Q9BQS8 1478 aa28.91■■■□□ 2.22
CROCCP3-205ENST00000591316 HECW1Q76N89 1606 aa28.91■■■□□ 2.22
CROCCP3-205ENST00000591316 ZCCHC11Q5TAX3 1644 aaKnown RBP28.89■■■□□ 2.22
CROCCP3-205ENST00000591316 EPRSP07814 1512 aaKnown RBP28.89■■■□□ 2.22
CROCCP3-205ENST00000591316 CDK13Q14004 1512 aaKnown RBP28.89■■■□□ 2.21
CROCCP3-205ENST00000591316 PLEKHD1A6NEE1 506 aa28.87■■■□□ 2.21
CROCCP3-205ENST00000591316 KCNH8Q96L42 1107 aa28.87■■■□□ 2.21
CROCCP3-205ENST00000591316 ASXL2Q76L83 1435 aa28.85■■■□□ 2.21
CROCCP3-205ENST00000591316 APLP2Q06481 763 aa28.84■■■□□ 2.21
CROCCP3-205ENST00000591316 CDK11AQ9UQ88 783 aaPredicted RBP28.84■■■□□ 2.21
CROCCP3-205ENST00000591316 TRHP20396 242 aaPredicted RBP28.82■■■□□ 2.2
CROCCP3-205ENST00000591316 CCDC18Q5T9S5 1454 aa28.8■■■□□ 2.2
CROCCP3-205ENST00000591316 LRRIQ1Q96JM4 1722 aa28.79■■■□□ 2.2
CROCCP3-205ENST00000591316 MAPKBP1O60336 1514 aa28.77■■■□□ 2.2
CROCCP3-205ENST00000591316 FAM69CQ0P6D2 419 aa28.75■■■□□ 2.19
CROCCP3-205ENST00000591316 WDR7Q9Y4E6 1490 aa28.73■■■□□ 2.19
CROCCP3-205ENST00000591316 KANK4Q5T7N3 995 aaPredicted RBP28.69■■■□□ 2.18
CROCCP3-205ENST00000591316 MTUS2Q5JR59 1369 aa28.67■■■□□ 2.18
CROCCP3-205ENST00000591316 PPARGC1BQ86YN6 1023 aaKnown RBP28.66■■■□□ 2.18
CROCCP3-205ENST00000591316 ABCC10Q5T3U5 1492 aa28.65■■■□□ 2.18
CROCCP3-205ENST00000591316 TROQ12816 1431 aaPredicted RBP28.64■■■□□ 2.18
CROCCP3-205ENST00000591316 TIAM1Q13009 1591 aa28.64■■■□□ 2.18
CROCCP3-205ENST00000591316 MAGI3Q5TCQ9 1506 aa28.64■■■□□ 2.17
CROCCP3-205ENST00000591316 MAP3K1Q13233 1512 aa28.58■■■□□ 2.17
CROCCP3-205ENST00000591316 DIP2BQ9P265 1576 aa28.57■■■□□ 2.16
CROCCP3-205ENST00000591316 LRRC9Q6ZRR7 1453 aa28.56■■■□□ 2.16
CROCCP3-205ENST00000591316 CFAP43Q8NDM7 1665 aa28.56■■■□□ 2.16
CROCCP3-205ENST00000591316 KIF14Q15058 1648 aa28.51■■■□□ 2.15
CROCCP3-205ENST00000591316 CD109Q6YHK3 1445 aa28.49■■■□□ 2.15
CROCCP3-205ENST00000591316 EHBP1L1Q8N3D4 1523 aa28.49■■■□□ 2.15
CROCCP3-205ENST00000591316 GLI2P10070 1586 aa28.49■■■□□ 2.15
CROCCP3-205ENST00000591316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.49■■■□□ 2.15
CROCCP3-205ENST00000591316 KIF13AQ9H1H9 1805 aa28.49■■■□□ 2.15
CROCCP3-205ENST00000591316 ABCA9Q8IUA7 1624 aa28.42■■■□□ 2.14
CROCCP3-205ENST00000591316 TTC37Q6PGP7 1564 aa28.42■■■□□ 2.14
CROCCP3-205ENST00000591316 CCNB3Q8WWL7 1395 aa28.41■■■□□ 2.14
CROCCP3-205ENST00000591316 NCOA2Q15596 1464 aa28.41■■■□□ 2.14
CROCCP3-205ENST00000591316 TSPOAP1O95153 1857 aa28.4■■■□□ 2.14
CROCCP3-205ENST00000591316 SUPT6HQ7KZ85 1726 aaKnown RBP28.38■■■□□ 2.13
CROCCP3-205ENST00000591316 MAP3K4Q9Y6R4 1608 aa28.38■■■□□ 2.13
CROCCP3-205ENST00000591316 ZNF777Q9ULD5 760 aaPredicted RBP28.36■■■□□ 2.13
CROCCP3-205ENST00000591316 PLCH2O75038 1416 aa28.36■■■□□ 2.13
CROCCP3-205ENST00000591316 CFDP1Q9UEE9 299 aaPredicted RBP28.35■■■□□ 2.13
CROCCP3-205ENST00000591316 EFCAB2Q5VUJ9 269 aa28.33■■■□□ 2.13
CROCCP3-205ENST00000591316 GPATCH8Q9UKJ3 1502 aaKnown RBP28.33■■■□□ 2.13
CROCCP3-205ENST00000591316 PHLDB1Q86UU1 1377 aa28.29■■■□□ 2.12
CROCCP3-205ENST00000591316 ARHGAP5Q13017 1502 aa28.28■■■□□ 2.12
CROCCP3-205ENST00000591316 AEBP2Q6ZN18 517 aaPredicted RBP28.28■■■□□ 2.12
CROCCP3-205ENST00000591316 MYO5CQ9NQX4 1742 aa28.27■■■□□ 2.12
CROCCP3-205ENST00000591316 FANCAO15360 1455 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms