RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 ATAD2BQ9ULI0 1458 aa15.85■□□□□ 0.13
SEH1L-208ENST00000590843 TDRD9Q8NDG6 1382 aaKnown RBP15.83■□□□□ 0.13
SEH1L-208ENST00000590843 NEUROD1Q13562 356 aa15.82■□□□□ 0.12
SEH1L-208ENST00000590843 FANCD2Q9BXW9 1451 aa15.82■□□□□ 0.12
SEH1L-208ENST00000590843 CNGB1Q14028 1251 aaPredicted RBP15.82■□□□□ 0.12
SEH1L-208ENST00000590843 FAM69CQ0P6D2 419 aa15.81■□□□□ 0.12
SEH1L-208ENST00000590843 LOC105371045A0A1W2PR82 267 aa15.8■□□□□ 0.12
SEH1L-208ENST00000590843 JPH4Q96JJ6 628 aa15.8■□□□□ 0.12
SEH1L-208ENST00000590843 ZBTB7CA1YPR0 619 aa15.79■□□□□ 0.12
SEH1L-208ENST00000590843 CCNB3Q8WWL7 1395 aa15.78■□□□□ 0.12
SEH1L-208ENST00000590843 LMOD2Q6P5Q4 547 aa15.77■□□□□ 0.12
SEH1L-208ENST00000590843 CHIC2Q9UKJ5 165 aa15.75■□□□□ 0.11
SEH1L-208ENST00000590843 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
SEH1L-208ENST00000590843 NCAPD3P42695 1498 aa15.74■□□□□ 0.11
SEH1L-208ENST00000590843 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
SEH1L-208ENST00000590843 PTPRGP23470 1445 aa15.72■□□□□ 0.11
SEH1L-208ENST00000590843 CENPBP07199 599 aaPredicted RBP15.72■□□□□ 0.11
SEH1L-208ENST00000590843 POGKQ9P215 609 aa15.71■□□□□ 0.11
SEH1L-208ENST00000590843 GGT6Q6P531 493 aa15.7■□□□□ 0.1
SEH1L-208ENST00000590843 MRC2Q9UBG0 1479 aa15.7■□□□□ 0.1
SEH1L-208ENST00000590843 RSPH4AQ5TD94 716 aa15.68■□□□□ 0.1
SEH1L-208ENST00000590843 PHF23Q9BUL5 403 aaPredicted RBP15.68■□□□□ 0.1
SEH1L-208ENST00000590843 MEX3CQ5U5Q3 659 aaKnown RBP15.67■□□□□ 0.1
SEH1L-208ENST00000590843 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
SEH1L-208ENST00000590843 CDCA8Q53HL2 280 aa15.65■□□□□ 0.1
SEH1L-208ENST00000590843 NPHP1O15259 732 aa15.64■□□□□ 0.09
SEH1L-208ENST00000590843 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
SEH1L-208ENST00000590843 CC2D2AQ9P2K1 1620 aa15.63■□□□□ 0.09
SEH1L-208ENST00000590843 CCDC9Q9Y3X0 531 aaKnown RBP15.62■□□□□ 0.09
SEH1L-208ENST00000590843 TONSLQ96HA7 1378 aa15.61■□□□□ 0.09
SEH1L-208ENST00000590843 TOP2AP11388 1531 aaKnown RBP15.61■□□□□ 0.09
SEH1L-208ENST00000590843 IFT140Q96RY7 1462 aa15.6■□□□□ 0.09
SEH1L-208ENST00000590843 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.09
SEH1L-208ENST00000590843 POGZQ7Z3K3 1410 aa15.58■□□□□ 0.08
SEH1L-208ENST00000590843 EIF4G2P78344 907 aaKnown RBP eCLIP15.58■□□□□ 0.08
SEH1L-208ENST00000590843 SPAG9O60271 1321 aaKnown RBP15.57■□□□□ 0.08
SEH1L-208ENST00000590843 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
SEH1L-208ENST00000590843 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
SEH1L-208ENST00000590843 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
SEH1L-208ENST00000590843 FMN1Q68DA7 1419 aa15.56■□□□□ 0.08
SEH1L-208ENST00000590843 DAXXQ9UER7 740 aaPredicted RBP15.56■□□□□ 0.08
SEH1L-208ENST00000590843 CEP162Q5TB80 1403 aa15.53■□□□□ 0.08
SEH1L-208ENST00000590843 WASHC2CQ9Y4E1 1318 aa15.53■□□□□ 0.08
SEH1L-208ENST00000590843 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.07
SEH1L-208ENST00000590843 DNAJC5BQ9UF47 199 aa15.52■□□□□ 0.07
SEH1L-208ENST00000590843 KDM2AQ9Y2K7 1162 aa15.51■□□□□ 0.07
SEH1L-208ENST00000590843 CLSPNQ9HAW4 1339 aa15.51■□□□□ 0.07
SEH1L-208ENST00000590843 ERICH6Q7L0X2 663 aa15.5■□□□□ 0.07
SEH1L-208ENST00000590843 TMX4Q9H1E5 349 aaPredicted RBP15.5■□□□□ 0.07
SEH1L-208ENST00000590843 GRIN2BQ13224 1484 aa15.5■□□□□ 0.07
SEH1L-208ENST00000590843 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
SEH1L-208ENST00000590843 RRP7BPQ9NSQ0 103 aa15.48■□□□□ 0.07
SEH1L-208ENST00000590843 TMC1Q8TDI8 760 aa15.47■□□□□ 0.07
SEH1L-208ENST00000590843 KIF3BO15066 747 aa15.46■□□□□ 0.07
SEH1L-208ENST00000590843 SF3B2Q13435 895 aaKnown RBP15.46■□□□□ 0.06
SEH1L-208ENST00000590843 ANP32CO43423 234 aa15.45■□□□□ 0.06
SEH1L-208ENST00000590843 CFAP53Q96M91 514 aa15.45■□□□□ 0.06
SEH1L-208ENST00000590843 ARXQ96QS3 562 aa15.44■□□□□ 0.06
SEH1L-208ENST00000590843 TNIKQ9UKE5 1360 aa15.44■□□□□ 0.06
SEH1L-208ENST00000590843 CSB-PGBD3P0DP91 1061 aa15.43■□□□□ 0.06
SEH1L-208ENST00000590843 RAPGEF2Q9Y4G8 1499 aa15.43■□□□□ 0.06
SEH1L-208ENST00000590843 RGL3Q3MIN7 710 aa15.42■□□□□ 0.06
SEH1L-208ENST00000590843 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.41■□□□□ 0.06
SEH1L-208ENST00000590843 HMGXB3Q12766 1538 aa15.41■□□□□ 0.06
SEH1L-208ENST00000590843 HMGB2P26583 209 aaKnown RBP15.4■□□□□ 0.06
SEH1L-208ENST00000590843 CCDC18Q5T9S5 1454 aa15.4■□□□□ 0.06
SEH1L-208ENST00000590843 ATF3P18847 181 aa15.37■□□□□ 0.05
SEH1L-208ENST00000590843 ANKRD30AQ9BXX3 1397 aa15.37■□□□□ 0.05
SEH1L-208ENST00000590843 LAMC3Q9Y6N6 1575 aa15.35■□□□□ 0.05
SEH1L-208ENST00000590843 PAK3O75914 559 aaPredicted RBP15.34■□□□□ 0.05
SEH1L-208ENST00000590843 WDR43Q15061 677 aaKnown RBP eCLIP15.33■□□□□ 0.04
SEH1L-208ENST00000590843 NUDCQ9Y266 331 aa15.32■□□□□ 0.04
SEH1L-208ENST00000590843 PNNQ9H307 717 aaKnown RBP15.32■□□□□ 0.04
SEH1L-208ENST00000590843 AQRO60306 1485 aaKnown RBP eCLIP15.32■□□□□ 0.04
SEH1L-208ENST00000590843 HDGFL2Q7Z4V5 671 aaPredicted RBP15.31■□□□□ 0.04
SEH1L-208ENST00000590843 PRG4Q92954 1404 aaPredicted RBP15.31■□□□□ 0.04
SEH1L-208ENST00000590843 SRPK2P78362 688 aaKnown RBP15.3■□□□□ 0.04
SEH1L-208ENST00000590843 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
SEH1L-208ENST00000590843 THEMISQ8N1K5 641 aaPredicted RBP15.29■□□□□ 0.04
SEH1L-208ENST00000590843 CHMP4AQ9BY43 222 aa15.28■□□□□ 0.04
SEH1L-208ENST00000590843 EVA1CP58658 441 aa15.27■□□□□ 0.04
SEH1L-208ENST00000590843 NGDNQ8NEJ9 315 aaKnown RBP15.27■□□□□ 0.04
SEH1L-208ENST00000590843 PPM1GO15355 546 aaPredicted RBP15.24■□□□□ 0.03
SEH1L-208ENST00000590843 SYNJ2O15056 1496 aa15.23■□□□□ 0.03
SEH1L-208ENST00000590843 CFTRP13569 1480 aa15.23■□□□□ 0.03
SEH1L-208ENST00000590843 KNSTRNQ9Y448 316 aa15.22■□□□□ 0.03
SEH1L-208ENST00000590843 UACAQ9BZF9 1416 aa15.22■□□□□ 0.03
SEH1L-208ENST00000590843 VGFO15240 615 aaPredicted RBP15.21■□□□□ 0.03
SEH1L-208ENST00000590843 STK26Q9P289 416 aa15.21■□□□□ 0.02
SEH1L-208ENST00000590843 ARHGAP35Q9NRY4 1499 aa15.21■□□□□ 0.02
SEH1L-208ENST00000590843 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
SEH1L-208ENST00000590843 WASHC2AQ641Q2 1341 aa15.2■□□□□ 0.02
SEH1L-208ENST00000590843 WIZO95785 1651 aa15.2■□□□□ 0.02
SEH1L-208ENST00000590843 HNRNPMP52272 730 aaKnown RBP eCLIP15.2■□□□□ 0.02
SEH1L-208ENST00000590843 ANKLE2Q86XL3 938 aa15.2■□□□□ 0.02
SEH1L-208ENST00000590843 NESP48681 1621 aa15.2■□□□□ 0.02
SEH1L-208ENST00000590843 YTHDC1Q96MU7 727 aaKnown RBP15.19■□□□□ 0.02
SEH1L-208ENST00000590843 SYNJ1O43426 1573 aa15.19■□□□□ 0.02
SEH1L-208ENST00000590843 MAPK8IP3Q9UPT6 1336 aa15.18■□□□□ 0.02
SEH1L-208ENST00000590843 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms