RNA–Protein interactions for RNA: ENST00000590436.5

TCF3-213, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-213ENST00000590436 CLASP1Q7Z460 1538 aa32.47■■■□□ 2.79
TCF3-213ENST00000590436 KIAA0586Q9BVV6 1533 aa32.47■■■□□ 2.79
TCF3-213ENST00000590436 UBTFP17480 764 aaKnown RBP32.46■■■□□ 2.79
TCF3-213ENST00000590436 IQGAP2Q13576 1575 aa32.42■■■□□ 2.78
TCF3-213ENST00000590436 LOC105371045A0A1W2PR82 267 aa32.33■■■□□ 2.77
TCF3-213ENST00000590436 TNIKQ9UKE5 1360 aa32.32■■■□□ 2.76
TCF3-213ENST00000590436 SHROOM2Q13796 1616 aa32.3■■■□□ 2.76
TCF3-213ENST00000590436 JPH4Q96JJ6 628 aa32.26■■■□□ 2.75
TCF3-213ENST00000590436 UGGT2Q9NYU1 1516 aa32.25■■■□□ 2.75
TCF3-213ENST00000590436 PRG4Q92954 1404 aaPredicted RBP32.17■■■□□ 2.74
TCF3-213ENST00000590436 CARMIL2Q6F5E8 1435 aa32.13■■■□□ 2.73
TCF3-213ENST00000590436 RANGAP1P46060 587 aaPredicted RBP32.12■■■□□ 2.73
TCF3-213ENST00000590436 EFCAB5A4FU69 1503 aa32.11■■■□□ 2.73
TCF3-213ENST00000590436 SAMD9Q5K651 1589 aa32.1■■■□□ 2.73
TCF3-213ENST00000590436 DISP1Q96F81 1524 aa32.1■■■□□ 2.73
TCF3-213ENST00000590436 KIAA0556O60303 1618 aa32.09■■■□□ 2.73
TCF3-213ENST00000590436 CEP162Q5TB80 1403 aa32.07■■■□□ 2.72
TCF3-213ENST00000590436 ARHGEF11O15085 1522 aa32.06■■■□□ 2.72
TCF3-213ENST00000590436 ERCC6L2Q5T890 1561 aa32.06■■■□□ 2.72
TCF3-213ENST00000590436 CLIP1P30622 1438 aa32.05■■■□□ 2.72
TCF3-213ENST00000590436 ARHGAP35Q9NRY4 1499 aa32■■■□□ 2.71
TCF3-213ENST00000590436 DNAJC5Q9H3Z4 198 aa31.99■■■□□ 2.71
TCF3-213ENST00000590436 RIMBP3CA6NJZ7 1639 aa31.99■■■□□ 2.71
TCF3-213ENST00000590436 RIMBP3BA6NNM3 1639 aa31.99■■■□□ 2.71
TCF3-213ENST00000590436 RIMBP3Q9UFD9 1639 aa31.99■■■□□ 2.71
TCF3-213ENST00000590436 P3H3Q8IVL6 736 aa31.93■■■□□ 2.7
TCF3-213ENST00000590436 FHOD3Q2V2M9 1422 aa31.91■■■□□ 2.7
TCF3-213ENST00000590436 PTPRGP23470 1445 aa31.87■■■□□ 2.69
TCF3-213ENST00000590436 ARAP1Q96P48 1450 aa31.84■■■□□ 2.69
TCF3-213ENST00000590436 TTBK1Q5TCY1 1321 aaPredicted RBP31.81■■■□□ 2.68
TCF3-213ENST00000590436 FMN1Q68DA7 1419 aa31.79■■■□□ 2.68
TCF3-213ENST00000590436 CYB5RLQ6IPT4 315 aa31.69■■■□□ 2.66
TCF3-213ENST00000590436 ABCA8O94911 1581 aa31.68■■■□□ 2.66
TCF3-213ENST00000590436 UACAQ9BZF9 1416 aa31.67■■■□□ 2.66
TCF3-213ENST00000590436 PLB1Q6P1J6 1458 aa31.67■■■□□ 2.66
TCF3-213ENST00000590436 RAPGEF6Q8TEU7 1601 aa31.67■■■□□ 2.66
TCF3-213ENST00000590436 VPS8Q8N3P4 1428 aa31.64■■■□□ 2.66
TCF3-213ENST00000590436 ABCC2Q92887 1545 aa31.64■■■□□ 2.66
TCF3-213ENST00000590436 UHRF1BP1LA0JNW5 1464 aa31.63■■■□□ 2.65
TCF3-213ENST00000590436 PCF11O94913 1555 aaKnown RBP31.61■■■□□ 2.65
TCF3-213ENST00000590436 ADCY10Q96PN6 1610 aa31.6■■■□□ 2.65
TCF3-213ENST00000590436 CASKIN1Q8WXD9 1431 aa31.59■■■□□ 2.65
TCF3-213ENST00000590436 HECW1Q76N89 1606 aa31.59■■■□□ 2.65
TCF3-213ENST00000590436 FYCO1Q9BQS8 1478 aa31.58■■■□□ 2.65
TCF3-213ENST00000590436 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
TCF3-213ENST00000590436 ATP1B4Q9UN42 357 aaPredicted RBP31.5■■■□□ 2.63
TCF3-213ENST00000590436 KDM5BQ9UGL1 1544 aa31.46■■■□□ 2.63
TCF3-213ENST00000590436 EPRSP07814 1512 aaKnown RBP31.44■■■□□ 2.62
TCF3-213ENST00000590436 NPM1P06748 294 aaKnown RBP eCLIP31.43■■■□□ 2.62
TCF3-213ENST00000590436 CCDC18Q5T9S5 1454 aa31.43■■■□□ 2.62
TCF3-213ENST00000590436 ZCCHC11Q5TAX3 1644 aaKnown RBP31.42■■■□□ 2.62
TCF3-213ENST00000590436 LRRIQ1Q96JM4 1722 aa31.41■■■□□ 2.62
TCF3-213ENST00000590436 ATP10BO94823 1461 aa31.4■■■□□ 2.62
TCF3-213ENST00000590436 ARID3CA6NKF2 412 aa31.39■■■□□ 2.62
TCF3-213ENST00000590436 CDK13Q14004 1512 aaKnown RBP31.38■■■□□ 2.61
TCF3-213ENST00000590436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.34■■■□□ 2.61
TCF3-213ENST00000590436 HNRNPUL2Q1KMD3 747 aaKnown RBP31.34■■■□□ 2.61
TCF3-213ENST00000590436 CFAP43Q8NDM7 1665 aa31.32■■■□□ 2.6
TCF3-213ENST00000590436 APLP2Q06481 763 aa31.3■■■□□ 2.6
TCF3-213ENST00000590436 MAP3K1Q13233 1512 aa31.29■■■□□ 2.6
TCF3-213ENST00000590436 TIAM1Q13009 1591 aa31.28■■■□□ 2.6
TCF3-213ENST00000590436 MAPKBP1O60336 1514 aa31.28■■■□□ 2.6
TCF3-213ENST00000590436 CDK11AQ9UQ88 783 aaPredicted RBP31.27■■■□□ 2.6
TCF3-213ENST00000590436 ASXL2Q76L83 1435 aa31.24■■■□□ 2.59
TCF3-213ENST00000590436 PLEKHD1A6NEE1 506 aa31.21■■■□□ 2.59
TCF3-213ENST00000590436 WDR7Q9Y4E6 1490 aa31.2■■■□□ 2.58
TCF3-213ENST00000590436 MTUS2Q5JR59 1369 aa31.16■■■□□ 2.58
TCF3-213ENST00000590436 TROQ12816 1431 aaPredicted RBP31.15■■■□□ 2.58
TCF3-213ENST00000590436 MAGI3Q5TCQ9 1506 aa31.14■■■□□ 2.58
TCF3-213ENST00000590436 EHBP1L1Q8N3D4 1523 aa31.14■■■□□ 2.58
TCF3-213ENST00000590436 LRRC9Q6ZRR7 1453 aa31.13■■■□□ 2.57
TCF3-213ENST00000590436 KIF14Q15058 1648 aa31.06■■■□□ 2.56
TCF3-213ENST00000590436 KANK4Q5T7N3 995 aaPredicted RBP31.05■■■□□ 2.56
TCF3-213ENST00000590436 KCNH8Q96L42 1107 aa31.04■■■□□ 2.56
TCF3-213ENST00000590436 ABCC10Q5T3U5 1492 aa31.02■■■□□ 2.56
TCF3-213ENST00000590436 DIP2BQ9P265 1576 aa31.02■■■□□ 2.56
TCF3-213ENST00000590436 SUPT6HQ7KZ85 1726 aaKnown RBP31.01■■■□□ 2.56
TCF3-213ENST00000590436 GLI2P10070 1586 aa30.98■■■□□ 2.55
TCF3-213ENST00000590436 ABCA9Q8IUA7 1624 aa30.96■■■□□ 2.55
TCF3-213ENST00000590436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.94■■■□□ 2.54
TCF3-213ENST00000590436 KIF13AQ9H1H9 1805 aa30.94■■■□□ 2.54
TCF3-213ENST00000590436 TTC37Q6PGP7 1564 aa30.92■■■□□ 2.54
TCF3-213ENST00000590436 FAM69CQ0P6D2 419 aa30.92■■■□□ 2.54
TCF3-213ENST00000590436 NCOA2Q15596 1464 aa30.92■■■□□ 2.54
TCF3-213ENST00000590436 PPARGC1BQ86YN6 1023 aaKnown RBP30.88■■■□□ 2.53
TCF3-213ENST00000590436 MAP3K4Q9Y6R4 1608 aa30.87■■■□□ 2.53
TCF3-213ENST00000590436 MYO5CQ9NQX4 1742 aa30.86■■■□□ 2.53
TCF3-213ENST00000590436 CCNB3Q8WWL7 1395 aa30.84■■■□□ 2.53
TCF3-213ENST00000590436 TRHP20396 242 aaPredicted RBP30.84■■■□□ 2.53
TCF3-213ENST00000590436 CD109Q6YHK3 1445 aa30.82■■■□□ 2.52
TCF3-213ENST00000590436 ITSN2Q9NZM3 1697 aa30.82■■■□□ 2.52
TCF3-213ENST00000590436 CDC42BPAQ5VT25 1732 aa30.81■■■□□ 2.52
TCF3-213ENST00000590436 PREX2Q70Z35 1606 aa30.8■■■□□ 2.52
TCF3-213ENST00000590436 GPATCH8Q9UKJ3 1502 aaKnown RBP30.78■■■□□ 2.52
TCF3-213ENST00000590436 ARAP3Q8WWN8 1544 aa30.77■■■□□ 2.52
TCF3-213ENST00000590436 PLCH2O75038 1416 aa30.76■■■□□ 2.51
TCF3-213ENST00000590436 PHLDB1Q86UU1 1377 aa30.75■■■□□ 2.51
TCF3-213ENST00000590436 MYOM3Q5VTT5 1437 aa30.74■■■□□ 2.51
TCF3-213ENST00000590436 TSPOAP1O95153 1857 aa30.74■■■□□ 2.51
TCF3-213ENST00000590436 CDC42BPBQ9Y5S2 1711 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms