RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 RIMBP3Q9UFD9 1639 aa27.83■■■□□ 2.05
LSM14A-208ENST00000590416 ARHGEF11O15085 1522 aa27.82■■■□□ 2.04
LSM14A-208ENST00000590416 KIAA0586Q9BVV6 1533 aa27.78■■■□□ 2.04
LSM14A-208ENST00000590416 CTTNBP2Q8WZ74 1663 aa27.75■■■□□ 2.03
LSM14A-208ENST00000590416 SHROOM2Q13796 1616 aa27.74■■■□□ 2.03
LSM14A-208ENST00000590416 KIF21BO75037 1637 aa27.73■■■□□ 2.03
LSM14A-208ENST00000590416 IQGAP2Q13576 1575 aa27.73■■■□□ 2.03
LSM14A-208ENST00000590416 JPH4Q96JJ6 628 aa27.72■■■□□ 2.03
LSM14A-208ENST00000590416 EHMT2Q96KQ7 1210 aa27.72■■■□□ 2.03
LSM14A-208ENST00000590416 PRG4Q92954 1404 aaPredicted RBP27.67■■■□□ 2.02
LSM14A-208ENST00000590416 ERCC6L2Q5T890 1561 aa27.65■■■□□ 2.02
LSM14A-208ENST00000590416 ARAP1Q96P48 1450 aa27.61■■■□□ 2.01
LSM14A-208ENST00000590416 GOLGA3Q08378 1498 aa27.6■■■□□ 2.01
LSM14A-208ENST00000590416 CYB5RLQ6IPT4 315 aa27.58■■■□□ 2.01
LSM14A-208ENST00000590416 UBTFP17480 764 aaKnown RBP27.56■■■□□ 2
LSM14A-208ENST00000590416 CARMIL2Q6F5E8 1435 aa27.53■■■□□ 2
LSM14A-208ENST00000590416 UGGT2Q9NYU1 1516 aa27.52■■■□□ 2
LSM14A-208ENST00000590416 RANGAP1P46060 587 aaPredicted RBP27.49■■□□□ 1.99
LSM14A-208ENST00000590416 TTBK1Q5TCY1 1321 aaPredicted RBP27.47■■□□□ 1.99
LSM14A-208ENST00000590416 KIAA0556O60303 1618 aa27.45■■□□□ 1.99
LSM14A-208ENST00000590416 DISP1Q96F81 1524 aa27.45■■□□□ 1.98
LSM14A-208ENST00000590416 TNIKQ9UKE5 1360 aa27.4■■□□□ 1.98
LSM14A-208ENST00000590416 PTPRGP23470 1445 aa27.37■■□□□ 1.97
LSM14A-208ENST00000590416 P3H3Q8IVL6 736 aa27.35■■□□□ 1.97
LSM14A-208ENST00000590416 SAMD9Q5K651 1589 aa27.32■■□□□ 1.96
LSM14A-208ENST00000590416 EFCAB5A4FU69 1503 aa27.26■■□□□ 1.96
LSM14A-208ENST00000590416 LOC105371045A0A1W2PR82 267 aa27.22■■□□□ 1.95
LSM14A-208ENST00000590416 ADCY10Q96PN6 1610 aa27.22■■□□□ 1.95
LSM14A-208ENST00000590416 FHOD3Q2V2M9 1422 aa27.22■■□□□ 1.95
LSM14A-208ENST00000590416 UACAQ9BZF9 1416 aa27.18■■□□□ 1.94
LSM14A-208ENST00000590416 NPM1P06748 294 aaKnown RBP eCLIP27.17■■□□□ 1.94
LSM14A-208ENST00000590416 ARHGAP35Q9NRY4 1499 aa27.15■■□□□ 1.94
LSM14A-208ENST00000590416 ABCC2Q92887 1545 aa27.14■■□□□ 1.94
LSM14A-208ENST00000590416 PLB1Q6P1J6 1458 aa27.13■■□□□ 1.93
LSM14A-208ENST00000590416 CLIP1P30622 1438 aa27.11■■□□□ 1.93
LSM14A-208ENST00000590416 UHRF1BP1LA0JNW5 1464 aa27.11■■□□□ 1.93
LSM14A-208ENST00000590416 ABCA8O94911 1581 aa27.09■■□□□ 1.93
LSM14A-208ENST00000590416 RAPGEF6Q8TEU7 1601 aa27.07■■□□□ 1.92
LSM14A-208ENST00000590416 CEP162Q5TB80 1403 aa27.05■■□□□ 1.92
LSM14A-208ENST00000590416 FMN1Q68DA7 1419 aa27.02■■□□□ 1.92
LSM14A-208ENST00000590416 ZCCHC11Q5TAX3 1644 aaKnown RBP27.01■■□□□ 1.92
LSM14A-208ENST00000590416 ARID3CA6NKF2 412 aa27.01■■□□□ 1.91
LSM14A-208ENST00000590416 TRHP20396 242 aaPredicted RBP27.01■■□□□ 1.91
LSM14A-208ENST00000590416 KDM5BQ9UGL1 1544 aa26.98■■□□□ 1.91
LSM14A-208ENST00000590416 ATP1B4Q9UN42 357 aaPredicted RBP26.97■■□□□ 1.91
LSM14A-208ENST00000590416 MAPKBP1O60336 1514 aa26.96■■□□□ 1.91
LSM14A-208ENST00000590416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
LSM14A-208ENST00000590416 HNRNPUL2Q1KMD3 747 aaKnown RBP26.92■■□□□ 1.9
LSM14A-208ENST00000590416 HECW1Q76N89 1606 aa26.9■■□□□ 1.9
LSM14A-208ENST00000590416 NUP153P49790 1475 aaKnown RBP26.9■■□□□ 1.9
LSM14A-208ENST00000590416 ASXL2Q76L83 1435 aa26.9■■□□□ 1.9
LSM14A-208ENST00000590416 ATP10BO94823 1461 aa26.87■■□□□ 1.89
LSM14A-208ENST00000590416 PCF11O94913 1555 aaKnown RBP26.87■■□□□ 1.89
LSM14A-208ENST00000590416 KIF13AQ9H1H9 1805 aa26.82■■□□□ 1.88
LSM14A-208ENST00000590416 CASKIN1Q8WXD9 1431 aa26.81■■□□□ 1.88
LSM14A-208ENST00000590416 ABCC10Q5T3U5 1492 aa26.81■■□□□ 1.88
LSM14A-208ENST00000590416 WDR7Q9Y4E6 1490 aa26.81■■□□□ 1.88
LSM14A-208ENST00000590416 DIP2BQ9P265 1576 aa26.8■■□□□ 1.88
LSM14A-208ENST00000590416 FAM69CQ0P6D2 419 aa26.8■■□□□ 1.88
LSM14A-208ENST00000590416 CDK13Q14004 1512 aaKnown RBP26.8■■□□□ 1.88
LSM14A-208ENST00000590416 FYCO1Q9BQS8 1478 aa26.78■■□□□ 1.88
LSM14A-208ENST00000590416 EPRSP07814 1512 aaKnown RBP26.77■■□□□ 1.88
LSM14A-208ENST00000590416 LRRIQ1Q96JM4 1722 aa26.76■■□□□ 1.88
LSM14A-208ENST00000590416 KCNH8Q96L42 1107 aa26.75■■□□□ 1.87
LSM14A-208ENST00000590416 CCDC18Q5T9S5 1454 aa26.72■■□□□ 1.87
LSM14A-208ENST00000590416 PLEKHD1A6NEE1 506 aa26.71■■□□□ 1.87
LSM14A-208ENST00000590416 TSPOAP1O95153 1857 aa26.7■■□□□ 1.86
LSM14A-208ENST00000590416 VPS8Q8N3P4 1428 aa26.69■■□□□ 1.86
LSM14A-208ENST00000590416 CDK11AQ9UQ88 783 aaPredicted RBP26.67■■□□□ 1.86
LSM14A-208ENST00000590416 GLI2P10070 1586 aa26.67■■□□□ 1.86
LSM14A-208ENST00000590416 MAP3K4Q9Y6R4 1608 aa26.6■■□□□ 1.85
LSM14A-208ENST00000590416 CFAP43Q8NDM7 1665 aa26.6■■□□□ 1.85
LSM14A-208ENST00000590416 TROQ12816 1431 aaPredicted RBP26.56■■□□□ 1.84
LSM14A-208ENST00000590416 KIF14Q15058 1648 aa26.54■■□□□ 1.84
LSM14A-208ENST00000590416 CD109Q6YHK3 1445 aa26.54■■□□□ 1.84
LSM14A-208ENST00000590416 ABCA9Q8IUA7 1624 aa26.54■■□□□ 1.84
LSM14A-208ENST00000590416 PPRC1Q5VV67 1664 aaKnown RBP26.51■■□□□ 1.83
LSM14A-208ENST00000590416 MAGI3Q5TCQ9 1506 aa26.5■■□□□ 1.83
LSM14A-208ENST00000590416 MTUS2Q5JR59 1369 aa26.5■■□□□ 1.83
LSM14A-208ENST00000590416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.49■■□□□ 1.83
LSM14A-208ENST00000590416 APLP2Q06481 763 aa26.49■■□□□ 1.83
LSM14A-208ENST00000590416 TIAM1Q13009 1591 aa26.49■■□□□ 1.83
LSM14A-208ENST00000590416 TTC37Q6PGP7 1564 aa26.49■■□□□ 1.83
LSM14A-208ENST00000590416 TEX14Q8IWB6 1497 aa26.47■■□□□ 1.83
LSM14A-208ENST00000590416 EHBP1L1Q8N3D4 1523 aa26.44■■□□□ 1.82
LSM14A-208ENST00000590416 MYO5CQ9NQX4 1742 aa26.42■■□□□ 1.82
LSM14A-208ENST00000590416 MAP3K1Q13233 1512 aa26.38■■□□□ 1.81
LSM14A-208ENST00000590416 KDM6BO15054 1643 aa26.36■■□□□ 1.81
LSM14A-208ENST00000590416 SUPT6HQ7KZ85 1726 aaKnown RBP26.35■■□□□ 1.81
LSM14A-208ENST00000590416 LRRC9Q6ZRR7 1453 aa26.34■■□□□ 1.81
LSM14A-208ENST00000590416 CFAP74Q9C0B2 1584 aa26.33■■□□□ 1.81
LSM14A-208ENST00000590416 PLCH2O75038 1416 aa26.31■■□□□ 1.8
LSM14A-208ENST00000590416 CDC42BPAQ5VT25 1732 aa26.31■■□□□ 1.8
LSM14A-208ENST00000590416 FANCAO15360 1455 aa26.3■■□□□ 1.8
LSM14A-208ENST00000590416 ARHGAP5Q13017 1502 aa26.3■■□□□ 1.8
LSM14A-208ENST00000590416 KANK4Q5T7N3 995 aaPredicted RBP26.3■■□□□ 1.8
LSM14A-208ENST00000590416 PREX2Q70Z35 1606 aa26.29■■□□□ 1.8
LSM14A-208ENST00000590416 CCNB3Q8WWL7 1395 aa26.29■■□□□ 1.8
LSM14A-208ENST00000590416 NEO1Q92859 1461 aa26.29■■□□□ 1.8
LSM14A-208ENST00000590416 CDC42BPBQ9Y5S2 1711 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms