RNA–Protein interactions for RNA: ENST00000590099.5

BECN1-213, Transcript of beclin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BECN1, Length 2,087 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-213ENST00000590099 MAP3K1Q13233 1512 aa24.08■■□□□ 1.45
BECN1-213ENST00000590099 DIEXFQ68CQ4 756 aaKnown RBP24.03■■□□□ 1.44
BECN1-213ENST00000590099 TIAM1Q13009 1591 aa24.03■■□□□ 1.44
BECN1-213ENST00000590099 CCNB3Q8WWL7 1395 aa24■■□□□ 1.43
BECN1-213ENST00000590099 CTTNBP2Q8WZ74 1663 aa24■■□□□ 1.43
BECN1-213ENST00000590099 IFT140Q96RY7 1462 aa24■■□□□ 1.43
BECN1-213ENST00000590099 FHAD1B1AJZ9 1412 aa24■■□□□ 1.43
BECN1-213ENST00000590099 ERCC6Q03468 1493 aa24■■□□□ 1.43
BECN1-213ENST00000590099 PBRM1Q86U86 1689 aa23.98■■□□□ 1.43
BECN1-213ENST00000590099 ZNF316A6NFI3 1004 aaPredicted RBP23.98■■□□□ 1.43
BECN1-213ENST00000590099 AQRO60306 1485 aaKnown RBP eCLIP23.98■■□□□ 1.433e-9■■■■□ 25.8
BECN1-213ENST00000590099 THOC2Q8NI27 1593 aaKnown RBP23.98■■□□□ 1.43
BECN1-213ENST00000590099 CLSPNQ9HAW4 1339 aa23.95■■□□□ 1.42
BECN1-213ENST00000590099 LRRC9Q6ZRR7 1453 aa23.95■■□□□ 1.42
BECN1-213ENST00000590099 DHX57Q6P158 1386 aaKnown RBP23.94■■□□□ 1.42
BECN1-213ENST00000590099 P3H3Q8IVL6 736 aa23.93■■□□□ 1.42
BECN1-213ENST00000590099 EFCAB5A4FU69 1503 aa23.93■■□□□ 1.42
BECN1-213ENST00000590099 ZNF608Q9ULD9 1512 aaPredicted RBP23.92■■□□□ 1.42
BECN1-213ENST00000590099 GRIN2BQ13224 1484 aa23.91■■□□□ 1.42
BECN1-213ENST00000590099 PCF11O94913 1555 aaKnown RBP23.91■■□□□ 1.42
BECN1-213ENST00000590099 FHOD3Q2V2M9 1422 aa23.9■■□□□ 1.42
BECN1-213ENST00000590099 ADAMTS12P58397 1594 aa23.9■■□□□ 1.42
BECN1-213ENST00000590099 CFAP43Q8NDM7 1665 aa23.87■■□□□ 1.41
BECN1-213ENST00000590099 FYCO1Q9BQS8 1478 aa23.84■■□□□ 1.41
BECN1-213ENST00000590099 CASKIN1Q8WXD9 1431 aa23.84■■□□□ 1.41
BECN1-213ENST00000590099 PHLDB1Q86UU1 1377 aa23.83■■□□□ 1.41
BECN1-213ENST00000590099 SAMD9Q5K651 1589 aa23.82■■□□□ 1.4
BECN1-213ENST00000590099 EIF4G3O43432 1585 aaKnown RBP23.8■■□□□ 1.4
BECN1-213ENST00000590099 ITGAEP38570 1179 aa23.79■■□□□ 1.4
BECN1-213ENST00000590099 ATP1B4Q9UN42 357 aaPredicted RBP23.77■■□□□ 1.4
BECN1-213ENST00000590099 FMN1Q68DA7 1419 aa23.77■■□□□ 1.4
BECN1-213ENST00000590099 SNAPC4Q5SXM2 1469 aa23.73■■□□□ 1.39
BECN1-213ENST00000590099 RAB3GAP2Q9H2M9 1393 aa23.71■■□□□ 1.39
BECN1-213ENST00000590099 IQGAP2Q13576 1575 aa23.7■■□□□ 1.38
BECN1-213ENST00000590099 SCAF1Q9H7N4 1312 aaKnown RBP23.67■■□□□ 1.38
BECN1-213ENST00000590099 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
BECN1-213ENST00000590099 FAM50AQ14320 339 aaKnown RBP23.66■■□□□ 1.38
BECN1-213ENST00000590099 MAGI1Q96QZ7 1491 aaPredicted RBP23.66■■□□□ 1.38
BECN1-213ENST00000590099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.65■■□□□ 1.38
BECN1-213ENST00000590099 GRIN2AQ12879 1464 aa23.64■■□□□ 1.38
BECN1-213ENST00000590099 ACIN1Q9UKV3 1341 aaKnown RBP23.62■■□□□ 1.37
BECN1-213ENST00000590099 UGGT2Q9NYU1 1516 aa23.61■■□□□ 1.37
BECN1-213ENST00000590099 KIAA0586Q9BVV6 1533 aa23.6■■□□□ 1.37
BECN1-213ENST00000590099 MAPKBP1O60336 1514 aa23.59■■□□□ 1.37
BECN1-213ENST00000590099 NEUROD1Q13562 356 aa23.58■■□□□ 1.37
BECN1-213ENST00000590099 LRRIQ1Q96JM4 1722 aa23.58■■□□□ 1.37
BECN1-213ENST00000590099 SYNJ2O15056 1496 aa23.58■■□□□ 1.36
BECN1-213ENST00000590099 MTUS2Q5JR59 1369 aa23.57■■□□□ 1.36
BECN1-213ENST00000590099 FGD6Q6ZV73 1430 aa23.55■■□□□ 1.36
BECN1-213ENST00000590099 MIER1Q8N108 512 aa23.55■■□□□ 1.36
BECN1-213ENST00000590099 CENPBP07199 599 aaPredicted RBP23.53■■□□□ 1.36
BECN1-213ENST00000590099 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
BECN1-213ENST00000590099 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
BECN1-213ENST00000590099 DISP1Q96F81 1524 aa23.49■■□□□ 1.35
BECN1-213ENST00000590099 NCOA2Q15596 1464 aa23.48■■□□□ 1.35
BECN1-213ENST00000590099 NUP160Q12769 1436 aa23.46■■□□□ 1.35
BECN1-213ENST00000590099 KIAA0556O60303 1618 aa23.46■■□□□ 1.35
BECN1-213ENST00000590099 EHBP1L1Q8N3D4 1523 aa23.45■■□□□ 1.34
BECN1-213ENST00000590099 MYOM3Q5VTT5 1437 aa23.44■■□□□ 1.34
BECN1-213ENST00000590099 CCDC18Q5T9S5 1454 aa23.43■■□□□ 1.34
BECN1-213ENST00000590099 SUPT6HQ7KZ85 1726 aaKnown RBP23.43■■□□□ 1.34
BECN1-213ENST00000590099 HECW1Q76N89 1606 aa23.42■■□□□ 1.34
BECN1-213ENST00000590099 MAGI3Q5TCQ9 1506 aa23.42■■□□□ 1.34
BECN1-213ENST00000590099 ARHGEF11O15085 1522 aa23.41■■□□□ 1.34
BECN1-213ENST00000590099 PTPRKQ15262 1439 aa23.4■■□□□ 1.34
BECN1-213ENST00000590099 FBLN2P98095 1184 aa23.39■■□□□ 1.33
BECN1-213ENST00000590099 EPRSP07814 1512 aaKnown RBP23.36■■□□□ 1.33
BECN1-213ENST00000590099 SIN3AQ96ST3 1273 aa23.36■■□□□ 1.33
BECN1-213ENST00000590099 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
BECN1-213ENST00000590099 TIMELESSQ9UNS1 1208 aa23.33■■□□□ 1.33
BECN1-213ENST00000590099 PTPN23Q9H3S7 1636 aa23.32■■□□□ 1.32
BECN1-213ENST00000590099 YTHDC1Q96MU7 727 aaKnown RBP23.31■■□□□ 1.32
BECN1-213ENST00000590099 CDK13Q14004 1512 aaKnown RBP23.3■■□□□ 1.32
BECN1-213ENST00000590099 JPH4Q96JJ6 628 aa23.29■■□□□ 1.32
BECN1-213ENST00000590099 NAIPQ13075 1403 aa23.29■■□□□ 1.32
BECN1-213ENST00000590099 GTF3C3Q9Y5Q9 886 aa23.28■■□□□ 1.32
BECN1-213ENST00000590099 TCOF1Q13428 1488 aaKnown RBP23.28■■□□□ 1.32
BECN1-213ENST00000590099 RAPGEF6Q8TEU7 1601 aa23.27■■□□□ 1.32
BECN1-213ENST00000590099 NUP153P49790 1475 aaKnown RBP23.26■■□□□ 1.31
BECN1-213ENST00000590099 UACAQ9BZF9 1416 aa23.26■■□□□ 1.31
BECN1-213ENST00000590099 CARMIL2Q6F5E8 1435 aa23.24■■□□□ 1.31
BECN1-213ENST00000590099 MIA2Q96PC5 1412 aa23.21■■□□□ 1.31
BECN1-213ENST00000590099 CHD1O14646 1710 aa23.21■■□□□ 1.31
BECN1-213ENST00000590099 PPP1R15AO75807 674 aaPredicted RBP23.2■■□□□ 1.3
BECN1-213ENST00000590099 ARID3CA6NKF2 412 aa23.18■■□□□ 1.3
BECN1-213ENST00000590099 PLB1Q6P1J6 1458 aa23.18■■□□□ 1.3
BECN1-213ENST00000590099 AKNAQ7Z591 1439 aa23.14■■□□□ 1.29
BECN1-213ENST00000590099 RRP7BPQ9NSQ0 103 aa23.13■■□□□ 1.29
BECN1-213ENST00000590099 CHIC2Q9UKJ5 165 aa23.12■■□□□ 1.29
BECN1-213ENST00000590099 GCC2Q8IWJ2 1684 aa23.11■■□□□ 1.29
BECN1-213ENST00000590099 ABCA8O94911 1581 aa23.11■■□□□ 1.29
BECN1-213ENST00000590099 PRG4Q92954 1404 aaPredicted RBP23.1■■□□□ 1.29
BECN1-213ENST00000590099 TONSLQ96HA7 1378 aa23.08■■□□□ 1.29
BECN1-213ENST00000590099 SHROOM2Q13796 1616 aa23.08■■□□□ 1.29
BECN1-213ENST00000590099 CDK11AQ9UQ88 783 aaPredicted RBP23.06■■□□□ 1.28
BECN1-213ENST00000590099 TROQ12816 1431 aaPredicted RBP23.05■■□□□ 1.28
BECN1-213ENST00000590099 KDM6BO15054 1643 aa23.04■■□□□ 1.28
BECN1-213ENST00000590099 DENND4BO75064 1496 aaPredicted RBP23.03■■□□□ 1.28
BECN1-213ENST00000590099 DAPK1P53355 1430 aa23.01■■□□□ 1.27
BECN1-213ENST00000590099 PTPRGP23470 1445 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms