RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 CCER2I3L3R5 266 aa22.13■■□□□ 1.13
APBA3-205ENST00000590064 CCDC136Q96JN2 1154 aa22.11■■□□□ 1.13
APBA3-205ENST00000590064 CHIC2Q9UKJ5 165 aa22.11■■□□□ 1.13
APBA3-205ENST00000590064 ARID3CA6NKF2 412 aa22.09■■□□□ 1.13
APBA3-205ENST00000590064 B4GALNT3Q6L9W6 998 aa22.09■■□□□ 1.13
APBA3-205ENST00000590064 SENP3-EIF4A1A0A087X0R7 540 aa22.07■■□□□ 1.12
APBA3-205ENST00000590064 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
APBA3-205ENST00000590064 SETD5Q9C0A6 1442 aa22.06■■□□□ 1.12
APBA3-205ENST00000590064 BAZ1BQ9UIG0 1483 aaKnown RBP22.06■■□□□ 1.12
APBA3-205ENST00000590064 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
APBA3-205ENST00000590064 PPP4R2Q9NY27 417 aa22.05■■□□□ 1.12
APBA3-205ENST00000590064 ZBTB47Q9UFB7 747 aaPredicted RBP22.05■■□□□ 1.12
APBA3-205ENST00000590064 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
APBA3-205ENST00000590064 SMARCA4P51532 1647 aa21.99■■□□□ 1.11
APBA3-205ENST00000590064 DEKP35659 375 aaKnown RBP21.99■■□□□ 1.11
APBA3-205ENST00000590064 RRP7BPQ9NSQ0 103 aa21.99■■□□□ 1.11
APBA3-205ENST00000590064 MTUS2Q5JR59 1369 aa21.98■■□□□ 1.11
APBA3-205ENST00000590064 PPP1R15AO75807 674 aaPredicted RBP21.98■■□□□ 1.11
APBA3-205ENST00000590064 TIMELESSQ9UNS1 1208 aa21.97■■□□□ 1.11
APBA3-205ENST00000590064 SALL2Q9Y467 1007 aaPredicted RBP21.96■■□□□ 1.11
APBA3-205ENST00000590064 NOP58Q9Y2X3 529 aaKnown RBP21.94■■□□□ 1.1
APBA3-205ENST00000590064 KIF21BO75037 1637 aa21.93■■□□□ 1.1
APBA3-205ENST00000590064 TMC1Q8TDI8 760 aa21.87■■□□□ 1.09
APBA3-205ENST00000590064 HSPA5P11021 654 aaKnown RBP21.83■■□□□ 1.08
APBA3-205ENST00000590064 EIF5BO60841 1220 aaKnown RBP21.81■■□□□ 1.08
APBA3-205ENST00000590064 RTN4Q9NQC3 1192 aaKnown RBP21.81■■□□□ 1.08
APBA3-205ENST00000590064 FANCIQ9NVI1 1328 aa21.77■■□□□ 1.08
APBA3-205ENST00000590064 SYNJ1O43426 1573 aa21.76■■□□□ 1.07
APBA3-205ENST00000590064 CARMIL1Q5VZK9 1371 aa21.76■■□□□ 1.07
APBA3-205ENST00000590064 FHAD1B1AJZ9 1412 aa21.76■■□□□ 1.07
APBA3-205ENST00000590064 CUX2O14529 1486 aa21.76■■□□□ 1.07
APBA3-205ENST00000590064 LAS1LQ9Y4W2 734 aaKnown RBP21.75■■□□□ 1.07
APBA3-205ENST00000590064 ERICH6BQ5W0A0 696 aa21.73■■□□□ 1.07
APBA3-205ENST00000590064 ZNF777Q9ULD5 760 aaPredicted RBP21.73■■□□□ 1.07
APBA3-205ENST00000590064 ARAP1Q96P48 1450 aa21.71■■□□□ 1.07
APBA3-205ENST00000590064 RRBP1Q9P2E9 1410 aaKnown RBP21.71■■□□□ 1.07
APBA3-205ENST00000590064 ARHGAP35Q9NRY4 1499 aa21.7■■□□□ 1.07
APBA3-205ENST00000590064 SLC4A1APQ9BWU0 796 aaKnown RBP21.7■■□□□ 1.06
APBA3-205ENST00000590064 MSH5O43196 834 aa21.67■■□□□ 1.06
APBA3-205ENST00000590064 NEFMP07197 916 aa21.65■■□□□ 1.06
APBA3-205ENST00000590064 FOXD1Q16676 465 aa21.65■■□□□ 1.06
APBA3-205ENST00000590064 KDM2AQ9Y2K7 1162 aa21.62■■□□□ 1.05
APBA3-205ENST00000590064 ATAD2BQ9ULI0 1458 aa21.62■■□□□ 1.05
APBA3-205ENST00000590064 PHLDB1Q86UU1 1377 aa21.61■■□□□ 1.05
APBA3-205ENST00000590064 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
APBA3-205ENST00000590064 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.05
APBA3-205ENST00000590064 FHOD3Q2V2M9 1422 aa21.56■■□□□ 1.04
APBA3-205ENST00000590064 IPO9Q96P70 1041 aaKnown RBP21.55■■□□□ 1.04
APBA3-205ENST00000590064 L3MBTL2Q969R5 705 aa21.54■■□□□ 1.04
APBA3-205ENST00000590064 PRKRIP1Q9H875 184 aaPredicted RBP21.54■■□□□ 1.04
APBA3-205ENST00000590064 PPM1GO15355 546 aaPredicted RBP21.5■■□□□ 1.03
APBA3-205ENST00000590064 PRXQ9BXM0 1461 aa21.49■■□□□ 1.03
APBA3-205ENST00000590064 CANXP27824 592 aaKnown RBP21.48■■□□□ 1.03
APBA3-205ENST00000590064 NUDCQ9Y266 331 aa21.47■■□□□ 1.03
APBA3-205ENST00000590064 MPHOSPH9Q99550 1183 aa21.47■■□□□ 1.03
APBA3-205ENST00000590064 CCDC18Q5T9S5 1454 aa21.47■■□□□ 1.03
APBA3-205ENST00000590064 ZBED9Q6R2W3 1325 aa21.47■■□□□ 1.03
APBA3-205ENST00000590064 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
APBA3-205ENST00000590064 FMN1Q68DA7 1419 aa21.46■■□□□ 1.03
APBA3-205ENST00000590064 LRRC9Q6ZRR7 1453 aa21.46■■□□□ 1.03
APBA3-205ENST00000590064 ARXQ96QS3 562 aa21.46■■□□□ 1.03
APBA3-205ENST00000590064 DDRGK1Q96HY6 314 aa21.45■■□□□ 1.02
APBA3-205ENST00000590064 WASHC2AQ641Q2 1341 aa21.45■■□□□ 1.02
APBA3-205ENST00000590064 CARD11Q9BXL7 1154 aa21.43■■□□□ 1.02
APBA3-205ENST00000590064 PAK3O75914 559 aaPredicted RBP21.43■■□□□ 1.02
APBA3-205ENST00000590064 CCDC184Q52MB2 194 aa21.43■■□□□ 1.02
APBA3-205ENST00000590064 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.42■■□□□ 1.02
APBA3-205ENST00000590064 IGF1RP08069 1367 aa21.4■■□□□ 1.02
APBA3-205ENST00000590064 FBLN2P98095 1184 aa21.4■■□□□ 1.02
APBA3-205ENST00000590064 RCAN3Q9UKA8 241 aa21.33■■□□□ 1.01
APBA3-205ENST00000590064 TCERG1O14776 1098 aaKnown RBP21.33■■□□□ 1
APBA3-205ENST00000590064 RGS3P49796 1198 aa21.33■■□□□ 1
APBA3-205ENST00000590064 UACAQ9BZF9 1416 aa21.33■■□□□ 1
APBA3-205ENST00000590064 TOP2BQ02880 1626 aa21.33■■□□□ 1
APBA3-205ENST00000590064 WDR43Q15061 677 aaKnown RBP eCLIP21.32■■□□□ 1
APBA3-205ENST00000590064 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.32■■□□□ 1
APBA3-205ENST00000590064 FGD6Q6ZV73 1430 aa21.31■■□□□ 1
APBA3-205ENST00000590064 RGL3Q3MIN7 710 aa21.31■■□□□ 1
APBA3-205ENST00000590064 MAPKBP1O60336 1514 aa21.3■■□□□ 1
APBA3-205ENST00000590064 CNTLNQ9NXG0 1405 aa21.3■■□□□ 1
APBA3-205ENST00000590064 CCDC7Q96M83 1385 aa21.29■■□□□ 1
APBA3-205ENST00000590064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.28■■□□□ 1
APBA3-205ENST00000590064 TIAM1Q13009 1591 aa21.28■■□□□ 1
APBA3-205ENST00000590064 CFDP1Q9UEE9 299 aaPredicted RBP21.27■■□□□ 1
APBA3-205ENST00000590064 CC2D1BQ5T0F9 858 aaKnown RBP21.27■■□□□ 1
APBA3-205ENST00000590064 EXOC6Q8TAG9 804 aa21.27■■□□□ 1
APBA3-205ENST00000590064 TSPY4P0CV99 314 aa21.25■□□□□ 0.99
APBA3-205ENST00000590064 TSPY10P0CW01 314 aa21.25■□□□□ 0.99
APBA3-205ENST00000590064 PDE4AP27815 886 aa21.25■□□□□ 0.99
APBA3-205ENST00000590064 KIF7Q2M1P5 1343 aa21.25■□□□□ 0.99
APBA3-205ENST00000590064 UPF2Q9HAU5 1272 aaKnown RBP21.24■□□□□ 0.99
APBA3-205ENST00000590064 AKNAQ7Z591 1439 aa21.23■□□□□ 0.99
APBA3-205ENST00000590064 ANO8Q9HCE9 1232 aaPredicted RBP21.23■□□□□ 0.99
APBA3-205ENST00000590064 PKD2Q13563 968 aa21.21■□□□□ 0.99
APBA3-205ENST00000590064 DCAF11Q8TEB1 546 aa21.21■□□□□ 0.99
APBA3-205ENST00000590064 IL27Q8NEV9 243 aa21.2■□□□□ 0.98
APBA3-205ENST00000590064 SLC4A3P48751 1232 aa21.19■□□□□ 0.98
APBA3-205ENST00000590064 CUX1P39880 1505 aa21.18■□□□□ 0.98
APBA3-205ENST00000590064 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
APBA3-205ENST00000590064 RRP1P56182 461 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms