RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 NISCHQ9Y2I1 1504 aa29.21■■■□□ 2.27
APBA3-205ENST00000590064 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
APBA3-205ENST00000590064 SHROOM4Q9ULL8 1493 aa27.2■■□□□ 1.94
APBA3-205ENST00000590064 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
APBA3-205ENST00000590064 PCGF6Q9BYE7 350 aa26.53■■□□□ 1.84
APBA3-205ENST00000590064 HRCP23327 699 aa26.22■■□□□ 1.79
APBA3-205ENST00000590064 PPARGC1BQ86YN6 1023 aaKnown RBP25.89■■□□□ 1.73
APBA3-205ENST00000590064 EHMT2Q96KQ7 1210 aa25.8■■□□□ 1.72
APBA3-205ENST00000590064 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
APBA3-205ENST00000590064 FAM9AQ8IZU1 332 aaPredicted RBP25.53■■□□□ 1.68
APBA3-205ENST00000590064 LOC105371045A0A1W2PR82 267 aa25.52■■□□□ 1.68
APBA3-205ENST00000590064 PELP1Q8IZL8 1130 aaKnown RBP25.48■■□□□ 1.67
APBA3-205ENST00000590064 ZEB1P37275 1124 aaPredicted RBP25.41■■□□□ 1.66
APBA3-205ENST00000590064 TRIM26Q12899 539 aaPredicted RBP25.4■■□□□ 1.66
APBA3-205ENST00000590064 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
APBA3-205ENST00000590064 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
APBA3-205ENST00000590064 MYO15BQ96JP2 1530 aa25.03■■□□□ 1.6
APBA3-205ENST00000590064 CCER1Q8TC90 406 aaPredicted RBP25.03■■□□□ 1.6
APBA3-205ENST00000590064 CENPBP07199 599 aaPredicted RBP24.98■■□□□ 1.59
APBA3-205ENST00000590064 DCAF1Q9Y4B6 1507 aa24.7■■□□□ 1.54
APBA3-205ENST00000590064 YTHDC1Q96MU7 727 aaKnown RBP24.68■■□□□ 1.54
APBA3-205ENST00000590064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.62■■□□□ 1.53
APBA3-205ENST00000590064 ZCCHC6Q5VYS8 1495 aaKnown RBP24.58■■□□□ 1.53
APBA3-205ENST00000590064 MYT1Q01538 1121 aa24.58■■□□□ 1.53
APBA3-205ENST00000590064 SCAF1Q9H7N4 1312 aaKnown RBP24.52■■□□□ 1.52
APBA3-205ENST00000590064 DIEXFQ68CQ4 756 aaKnown RBP24.45■■□□□ 1.51
APBA3-205ENST00000590064 GTF3C3Q9Y5Q9 886 aa24.44■■□□□ 1.5
APBA3-205ENST00000590064 ACIN1Q9UKV3 1341 aaKnown RBP24.37■■□□□ 1.49
APBA3-205ENST00000590064 APLP2Q06481 763 aa24.35■■□□□ 1.49
APBA3-205ENST00000590064 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
APBA3-205ENST00000590064 RANGAP1P46060 587 aaPredicted RBP24.21■■□□□ 1.47
APBA3-205ENST00000590064 NEUROD1Q13562 356 aa24.2■■□□□ 1.46
APBA3-205ENST00000590064 CCDC180Q9P1Z9 1646 aa24.12■■□□□ 1.45
APBA3-205ENST00000590064 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
APBA3-205ENST00000590064 ZNF316A6NFI3 1004 aaPredicted RBP23.9■■□□□ 1.42
APBA3-205ENST00000590064 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
APBA3-205ENST00000590064 NEFLP07196 543 aa23.62■■□□□ 1.37
APBA3-205ENST00000590064 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
APBA3-205ENST00000590064 ITGAEP38570 1179 aa23.57■■□□□ 1.36
APBA3-205ENST00000590064 ERICH6Q7L0X2 663 aa23.55■■□□□ 1.36
APBA3-205ENST00000590064 MIER1Q8N108 512 aa23.55■■□□□ 1.36
APBA3-205ENST00000590064 BCANQ96GW7 911 aa23.47■■□□□ 1.35
APBA3-205ENST00000590064 CSRNP3Q8WYN3 585 aa23.44■■□□□ 1.34
APBA3-205ENST00000590064 ATP1B4Q9UN42 357 aaPredicted RBP23.39■■□□□ 1.33
APBA3-205ENST00000590064 ABCC9O60706 1549 aa23.32■■□□□ 1.32
APBA3-205ENST00000590064 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
APBA3-205ENST00000590064 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
APBA3-205ENST00000590064 CLSPNQ9HAW4 1339 aa23.1■■□□□ 1.29
APBA3-205ENST00000590064 CECR2Q9BXF3 1484 aa23.06■■□□□ 1.28
APBA3-205ENST00000590064 FKBP8Q14318 412 aa23.05■■□□□ 1.28
APBA3-205ENST00000590064 PABPN1Q86U42 306 aaKnown RBP eCLIP22.99■■□□□ 1.27
APBA3-205ENST00000590064 TNIKQ9UKE5 1360 aa22.99■■□□□ 1.27
APBA3-205ENST00000590064 SUPT16HQ9Y5B9 1047 aaKnown RBP22.97■■□□□ 1.27
APBA3-205ENST00000590064 FAM50AQ14320 339 aaKnown RBP22.96■■□□□ 1.27
APBA3-205ENST00000590064 CLIP1P30622 1438 aa22.91■■□□□ 1.26
APBA3-205ENST00000590064 DDX10Q13206 875 aaKnown RBP22.91■■□□□ 1.26
APBA3-205ENST00000590064 ANP32CO43423 234 aa22.9■■□□□ 1.26
APBA3-205ENST00000590064 SOGA1O94964 1423 aa22.9■■□□□ 1.26
APBA3-205ENST00000590064 ANP32EQ9BTT0 268 aa22.89■■□□□ 1.25
APBA3-205ENST00000590064 GOLGA3Q08378 1498 aa22.86■■□□□ 1.25
APBA3-205ENST00000590064 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
APBA3-205ENST00000590064 TRIM52Q96A61 297 aa22.82■■□□□ 1.24
APBA3-205ENST00000590064 CNGB1Q14028 1251 aaPredicted RBP22.81■■□□□ 1.24
APBA3-205ENST00000590064 EEA1Q15075 1411 aa22.81■■□□□ 1.24
APBA3-205ENST00000590064 CCDC88BA6NC98 1476 aa22.8■■□□□ 1.24
APBA3-205ENST00000590064 ABCC8Q09428 1581 aa22.79■■□□□ 1.24
APBA3-205ENST00000590064 CDK11AQ9UQ88 783 aaPredicted RBP22.78■■□□□ 1.24
APBA3-205ENST00000590064 HIRIP3Q9BW71 556 aaPredicted RBP22.72■■□□□ 1.23
APBA3-205ENST00000590064 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
APBA3-205ENST00000590064 TSHZ2Q9NRE2 1034 aa22.68■■□□□ 1.22
APBA3-205ENST00000590064 POLR3GLQ9BT43 218 aa22.68■■□□□ 1.22
APBA3-205ENST00000590064 WIZO95785 1651 aa22.66■■□□□ 1.22
APBA3-205ENST00000590064 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
APBA3-205ENST00000590064 BCL11AQ9H165 835 aa22.6■■□□□ 1.21
APBA3-205ENST00000590064 HNRNPUQ00839 825 aaKnown RBP eCLIP22.6■■□□□ 1.21
APBA3-205ENST00000590064 IRX6P78412 446 aaPredicted RBP22.59■■□□□ 1.21
APBA3-205ENST00000590064 P3H3Q8IVL6 736 aa22.59■■□□□ 1.21
APBA3-205ENST00000590064 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
APBA3-205ENST00000590064 RTL5Q5HYW3 569 aaPredicted RBP22.54■■□□□ 1.2
APBA3-205ENST00000590064 RUSC2Q8N2Y8 1516 aa22.53■■□□□ 1.2
APBA3-205ENST00000590064 VPS8Q8N3P4 1428 aa22.52■■□□□ 1.2
APBA3-205ENST00000590064 NACADO15069 1562 aa22.51■■□□□ 1.19
APBA3-205ENST00000590064 KCNH8Q96L42 1107 aa22.47■■□□□ 1.19
APBA3-205ENST00000590064 TONSLQ96HA7 1378 aa22.45■■□□□ 1.18
APBA3-205ENST00000590064 SIN3AQ96ST3 1273 aa22.44■■□□□ 1.18
APBA3-205ENST00000590064 RBM19Q9Y4C8 960 aaKnown RBP22.44■■□□□ 1.18
APBA3-205ENST00000590064 KANK4Q5T7N3 995 aaPredicted RBP22.42■■□□□ 1.18
APBA3-205ENST00000590064 FAM9BQ8IZU0 186 aa22.36■■□□□ 1.17
APBA3-205ENST00000590064 DHX57Q6P158 1386 aaKnown RBP22.35■■□□□ 1.17
APBA3-205ENST00000590064 NBR1Q14596 966 aa22.34■■□□□ 1.17
APBA3-205ENST00000590064 CCNB3Q8WWL7 1395 aa22.32■■□□□ 1.16
APBA3-205ENST00000590064 TOP2AP11388 1531 aaKnown RBP22.27■■□□□ 1.16
APBA3-205ENST00000590064 DAXXQ9UER7 740 aaPredicted RBP22.26■■□□□ 1.15
APBA3-205ENST00000590064 ANP32AP39687 249 aaKnown RBP22.25■■□□□ 1.15
APBA3-205ENST00000590064 ZNF326Q5BKZ1 582 aaKnown RBP22.23■■□□□ 1.15
APBA3-205ENST00000590064 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
APBA3-205ENST00000590064 NPM2Q86SE8 214 aaKnown RBP22.2■■□□□ 1.14
APBA3-205ENST00000590064 MRS2Q9HD23 443 aa22.18■■□□□ 1.14
APBA3-205ENST00000590064 MYT1LQ9UL68 1186 aa22.17■■□□□ 1.14
APBA3-205ENST00000590064 RAB3GAP2Q9H2M9 1393 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms