RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 EFCAB5A4FU69 1503 aa30.3■■■□□ 2.44
POLR2E-207ENST00000590060 VPS8Q8N3P4 1428 aa30.28■■■□□ 2.44
POLR2E-207ENST00000590060 CHMP7Q8WUX9 453 aaPredicted RBP30.26■■■□□ 2.43
POLR2E-207ENST00000590060 ARHGAP35Q9NRY4 1499 aa30.25■■■□□ 2.43
POLR2E-207ENST00000590060 ARAP1Q96P48 1450 aa30.23■■■□□ 2.43
POLR2E-207ENST00000590060 IQGAP2Q13576 1575 aa30.22■■■□□ 2.43
POLR2E-207ENST00000590060 KIAA0586Q9BVV6 1533 aa30.16■■■□□ 2.42
POLR2E-207ENST00000590060 FBLN2P98095 1184 aa30.15■■■□□ 2.42
POLR2E-207ENST00000590060 SAMD9Q5K651 1589 aa30.1■■■□□ 2.41
POLR2E-207ENST00000590060 NUP160Q12769 1436 aa30.09■■■□□ 2.41
POLR2E-207ENST00000590060 CEP170Q5SW79 1584 aa30.07■■■□□ 2.4
POLR2E-207ENST00000590060 APLP2Q06481 763 aa30.07■■■□□ 2.4
POLR2E-207ENST00000590060 UGGT2Q9NYU1 1516 aa30.06■■■□□ 2.4
POLR2E-207ENST00000590060 CHD1O14646 1710 aa30.02■■■□□ 2.4
POLR2E-207ENST00000590060 FHOD3Q2V2M9 1422 aa30.01■■■□□ 2.39
POLR2E-207ENST00000590060 FMN1Q68DA7 1419 aa30■■■□□ 2.39
POLR2E-207ENST00000590060 P3H3Q8IVL6 736 aa29.94■■■□□ 2.38
POLR2E-207ENST00000590060 FYCO1Q9BQS8 1478 aa29.9■■■□□ 2.38
POLR2E-207ENST00000590060 KIAA0556O60303 1618 aa29.89■■■□□ 2.38
POLR2E-207ENST00000590060 PCF11O94913 1555 aaKnown RBP29.88■■■□□ 2.37
POLR2E-207ENST00000590060 CARMIL2Q6F5E8 1435 aa29.88■■■□□ 2.37
POLR2E-207ENST00000590060 TRIM26Q12899 539 aaPredicted RBP29.85■■■□□ 2.37
POLR2E-207ENST00000590060 CASKIN1Q8WXD9 1431 aa29.85■■■□□ 2.37
POLR2E-207ENST00000590060 DISP1Q96F81 1524 aa29.82■■■□□ 2.36
POLR2E-207ENST00000590060 MAP3K1Q13233 1512 aa29.81■■■□□ 2.36
POLR2E-207ENST00000590060 JPH4Q96JJ6 628 aa29.79■■■□□ 2.36
POLR2E-207ENST00000590060 PPARGC1BQ86YN6 1023 aaKnown RBP29.76■■■□□ 2.35
POLR2E-207ENST00000590060 TIAM1Q13009 1591 aa29.74■■■□□ 2.35
POLR2E-207ENST00000590060 CFAP43Q8NDM7 1665 aa29.73■■■□□ 2.35
POLR2E-207ENST00000590060 HECW1Q76N89 1606 aa29.73■■■□□ 2.35
POLR2E-207ENST00000590060 ATP1B4Q9UN42 357 aaPredicted RBP29.71■■■□□ 2.35
POLR2E-207ENST00000590060 CLASP1Q7Z460 1538 aa29.71■■■□□ 2.35
POLR2E-207ENST00000590060 SHROOM2Q13796 1616 aa29.7■■■□□ 2.34
POLR2E-207ENST00000590060 PCGF6Q9BYE7 350 aa29.68■■■□□ 2.34
POLR2E-207ENST00000590060 CCDC18Q5T9S5 1454 aa29.68■■■□□ 2.34
POLR2E-207ENST00000590060 PRG4Q92954 1404 aaPredicted RBP29.66■■■□□ 2.34
POLR2E-207ENST00000590060 TTBK1Q5TCY1 1321 aaPredicted RBP29.66■■■□□ 2.34
POLR2E-207ENST00000590060 RAPGEF6Q8TEU7 1601 aa29.59■■■□□ 2.33
POLR2E-207ENST00000590060 LRRC9Q6ZRR7 1453 aa29.58■■■□□ 2.33
POLR2E-207ENST00000590060 KANK4Q5T7N3 995 aaPredicted RBP29.52■■■□□ 2.32
POLR2E-207ENST00000590060 EPRSP07814 1512 aaKnown RBP29.5■■■□□ 2.31
POLR2E-207ENST00000590060 PTPRGP23470 1445 aa29.49■■■□□ 2.31
POLR2E-207ENST00000590060 EHBP1L1Q8N3D4 1523 aa29.49■■■□□ 2.31
POLR2E-207ENST00000590060 MTUS2Q5JR59 1369 aa29.49■■■□□ 2.31
POLR2E-207ENST00000590060 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
POLR2E-207ENST00000590060 LRRIQ1Q96JM4 1722 aa29.45■■■□□ 2.31
POLR2E-207ENST00000590060 ABCA8O94911 1581 aa29.44■■■□□ 2.3
POLR2E-207ENST00000590060 NUP153P49790 1475 aaKnown RBP29.44■■■□□ 2.3
POLR2E-207ENST00000590060 PLB1Q6P1J6 1458 aa29.43■■■□□ 2.3
POLR2E-207ENST00000590060 CDK13Q14004 1512 aaKnown RBP29.39■■■□□ 2.3
POLR2E-207ENST00000590060 CDK11AQ9UQ88 783 aaPredicted RBP29.38■■■□□ 2.29
POLR2E-207ENST00000590060 SUPT6HQ7KZ85 1726 aaKnown RBP29.36■■■□□ 2.29
POLR2E-207ENST00000590060 ERCC6L2Q5T890 1561 aa29.35■■■□□ 2.29
POLR2E-207ENST00000590060 UACAQ9BZF9 1416 aa29.33■■■□□ 2.29
POLR2E-207ENST00000590060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.31■■■□□ 2.28
POLR2E-207ENST00000590060 HNRNPUL2Q1KMD3 747 aaKnown RBP29.31■■■□□ 2.28
POLR2E-207ENST00000590060 RRBP1Q9P2E9 1410 aaKnown RBP29.3■■■□□ 2.28
POLR2E-207ENST00000590060 ABCC2Q92887 1545 aa29.27■■■□□ 2.28
POLR2E-207ENST00000590060 ARID3CA6NKF2 412 aa29.27■■■□□ 2.28
POLR2E-207ENST00000590060 CCNB3Q8WWL7 1395 aa29.26■■■□□ 2.27
POLR2E-207ENST00000590060 NCOA2Q15596 1464 aa29.25■■■□□ 2.27
POLR2E-207ENST00000590060 MAGI3Q5TCQ9 1506 aa29.25■■■□□ 2.27
POLR2E-207ENST00000590060 PHLDB1Q86UU1 1377 aa29.23■■■□□ 2.27
POLR2E-207ENST00000590060 UHRF1BP1LA0JNW5 1464 aa29.22■■■□□ 2.27
POLR2E-207ENST00000590060 TROQ12816 1431 aaPredicted RBP29.21■■■□□ 2.27
POLR2E-207ENST00000590060 ATP10BO94823 1461 aa29.18■■■□□ 2.26
POLR2E-207ENST00000590060 ARHGEF11O15085 1522 aa29.18■■■□□ 2.26
POLR2E-207ENST00000590060 MYOM3Q5VTT5 1437 aa29.15■■■□□ 2.26
POLR2E-207ENST00000590060 PLEKHD1A6NEE1 506 aa29.14■■■□□ 2.26
POLR2E-207ENST00000590060 ADCY10Q96PN6 1610 aa29.13■■■□□ 2.25
POLR2E-207ENST00000590060 FGD6Q6ZV73 1430 aa29.12■■■□□ 2.25
POLR2E-207ENST00000590060 KIF14Q15058 1648 aa29.11■■■□□ 2.25
POLR2E-207ENST00000590060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.1■■■□□ 2.25
POLR2E-207ENST00000590060 KDM5BQ9UGL1 1544 aa29.04■■■□□ 2.24
POLR2E-207ENST00000590060 MIA2Q96PC5 1412 aa29.04■■■□□ 2.24
POLR2E-207ENST00000590060 FAM50AQ14320 339 aaKnown RBP29.04■■■□□ 2.24
POLR2E-207ENST00000590060 ITSN2Q9NZM3 1697 aa29.04■■■□□ 2.24
POLR2E-207ENST00000590060 ZCCHC11Q5TAX3 1644 aaKnown RBP29.03■■■□□ 2.24
POLR2E-207ENST00000590060 PTPN23Q9H3S7 1636 aa28.99■■■□□ 2.23
POLR2E-207ENST00000590060 TCOF1Q13428 1488 aaKnown RBP28.96■■■□□ 2.23
POLR2E-207ENST00000590060 ABCC10Q5T3U5 1492 aa28.9■■■□□ 2.22
POLR2E-207ENST00000590060 NPM1P06748 294 aaKnown RBP eCLIP28.89■■■□□ 2.22
POLR2E-207ENST00000590060 ITGAEP38570 1179 aa28.89■■■□□ 2.22
POLR2E-207ENST00000590060 GPATCH8Q9UKJ3 1502 aaKnown RBP28.86■■■□□ 2.21
POLR2E-207ENST00000590060 RIMBP3CA6NJZ7 1639 aa28.85■■■□□ 2.21
POLR2E-207ENST00000590060 RIMBP3BA6NNM3 1639 aa28.85■■■□□ 2.21
POLR2E-207ENST00000590060 RIMBP3Q9UFD9 1639 aa28.85■■■□□ 2.21
POLR2E-207ENST00000590060 CFDP1Q9UEE9 299 aaPredicted RBP28.84■■■□□ 2.21
POLR2E-207ENST00000590060 WDR7Q9Y4E6 1490 aa28.84■■■□□ 2.21
POLR2E-207ENST00000590060 CDC42BPAQ5VT25 1732 aa28.8■■■□□ 2.2
POLR2E-207ENST00000590060 PREX2Q70Z35 1606 aa28.8■■■□□ 2.2
POLR2E-207ENST00000590060 CAMSAP2Q08AD1 1489 aa28.78■■■□□ 2.2
POLR2E-207ENST00000590060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.78■■■□□ 2.2
POLR2E-207ENST00000590060 TTC37Q6PGP7 1564 aa28.75■■■□□ 2.19
POLR2E-207ENST00000590060 MYO5CQ9NQX4 1742 aa28.74■■■□□ 2.19
POLR2E-207ENST00000590060 HRCP23327 699 aa28.73■■■□□ 2.19
POLR2E-207ENST00000590060 ASXL2Q76L83 1435 aa28.73■■■□□ 2.19
POLR2E-207ENST00000590060 CCER1Q8TC90 406 aaPredicted RBP28.73■■■□□ 2.19
POLR2E-207ENST00000590060 DNMT1P26358 1616 aaKnown RBP28.72■■■□□ 2.19
POLR2E-207ENST00000590060 ZEB1P37275 1124 aaPredicted RBP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms