RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 CARMIL1Q5VZK9 1371 aa25.86■■□□□ 1.73
NFIX-212ENST00000590027 KIAA0586Q9BVV6 1533 aa25.84■■□□□ 1.73
NFIX-212ENST00000590027 JPH4Q96JJ6 628 aa25.83■■□□□ 1.73
NFIX-212ENST00000590027 TRHP20396 242 aaPredicted RBP25.79■■□□□ 1.72
NFIX-212ENST00000590027 IQGAP2Q13576 1575 aa25.71■■□□□ 1.71
NFIX-212ENST00000590027 RAPGEF2Q9Y4G8 1499 aa25.71■■□□□ 1.71
NFIX-212ENST00000590027 ADCY10Q96PN6 1610 aa25.62■■□□□ 1.69
NFIX-212ENST00000590027 CTTNBP2Q8WZ74 1663 aa25.59■■□□□ 1.69
NFIX-212ENST00000590027 CARMIL2Q6F5E8 1435 aa25.55■■□□□ 1.68
NFIX-212ENST00000590027 PRXQ9BXM0 1461 aa25.55■■□□□ 1.68
NFIX-212ENST00000590027 UGGT2Q9NYU1 1516 aa25.54■■□□□ 1.68
NFIX-212ENST00000590027 DISP1Q96F81 1524 aa25.53■■□□□ 1.68
NFIX-212ENST00000590027 KIF13AQ9H1H9 1805 aa25.51■■□□□ 1.67
NFIX-212ENST00000590027 TNIKQ9UKE5 1360 aa25.51■■□□□ 1.67
NFIX-212ENST00000590027 KIAA0556O60303 1618 aa25.5■■□□□ 1.67
NFIX-212ENST00000590027 PTPRGP23470 1445 aa25.5■■□□□ 1.67
NFIX-212ENST00000590027 MAPKBP1O60336 1514 aa25.49■■□□□ 1.67
NFIX-212ENST00000590027 TTBK1Q5TCY1 1321 aaPredicted RBP25.45■■□□□ 1.66
NFIX-212ENST00000590027 NPM1P06748 294 aaKnown RBP eCLIP25.41■■□□□ 1.66
NFIX-212ENST00000590027 DIP2BQ9P265 1576 aa25.4■■□□□ 1.66
NFIX-212ENST00000590027 ABCC10Q5T3U5 1492 aa25.39■■□□□ 1.65
NFIX-212ENST00000590027 EEA1Q15075 1411 aa25.38■■□□□ 1.65
NFIX-212ENST00000590027 ABCC2Q92887 1545 aa25.37■■□□□ 1.65
NFIX-212ENST00000590027 UHRF1BP1LA0JNW5 1464 aa25.36■■□□□ 1.65
NFIX-212ENST00000590027 UACAQ9BZF9 1416 aa25.35■■□□□ 1.65
NFIX-212ENST00000590027 CSRNP3Q8WYN3 585 aa25.34■■□□□ 1.65
NFIX-212ENST00000590027 GOLGA3Q08378 1498 aa25.34■■□□□ 1.65
NFIX-212ENST00000590027 FAM69CQ0P6D2 419 aa25.28■■□□□ 1.64
NFIX-212ENST00000590027 ZCCHC11Q5TAX3 1644 aaKnown RBP25.26■■□□□ 1.63
NFIX-212ENST00000590027 KDM5BQ9UGL1 1544 aa25.25■■□□□ 1.63
NFIX-212ENST00000590027 KIF21BO75037 1637 aa25.23■■□□□ 1.63
NFIX-212ENST00000590027 PLB1Q6P1J6 1458 aa25.23■■□□□ 1.63
NFIX-212ENST00000590027 ASXL2Q76L83 1435 aa25.23■■□□□ 1.63
NFIX-212ENST00000590027 CHIC1Q5VXU3 224 aa25.23■■□□□ 1.63
NFIX-212ENST00000590027 FAM9AQ8IZU1 332 aaPredicted RBP25.23■■□□□ 1.63
NFIX-212ENST00000590027 ABCA8O94911 1581 aa25.22■■□□□ 1.63
NFIX-212ENST00000590027 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
NFIX-212ENST00000590027 TSPOAP1O95153 1857 aa25.2■■□□□ 1.62
NFIX-212ENST00000590027 GLI2P10070 1586 aa25.15■■□□□ 1.62
NFIX-212ENST00000590027 EPRSP07814 1512 aaKnown RBP25.11■■□□□ 1.61
NFIX-212ENST00000590027 PPRC1Q5VV67 1664 aaKnown RBP25.1■■□□□ 1.61
NFIX-212ENST00000590027 P3H3Q8IVL6 736 aa25.09■■□□□ 1.61
NFIX-212ENST00000590027 WDR7Q9Y4E6 1490 aa25.08■■□□□ 1.6
NFIX-212ENST00000590027 KDM6BO15054 1643 aa25.08■■□□□ 1.6
NFIX-212ENST00000590027 MAP3K4Q9Y6R4 1608 aa25.06■■□□□ 1.6
NFIX-212ENST00000590027 RAPGEF6Q8TEU7 1601 aa25.03■■□□□ 1.6
NFIX-212ENST00000590027 FHOD3Q2V2M9 1422 aa25.02■■□□□ 1.6
NFIX-212ENST00000590027 RANGAP1P46060 587 aaPredicted RBP25.01■■□□□ 1.59
NFIX-212ENST00000590027 EFCAB5A4FU69 1503 aa25.01■■□□□ 1.59
NFIX-212ENST00000590027 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
NFIX-212ENST00000590027 ATP10BO94823 1461 aa24.95■■□□□ 1.58
NFIX-212ENST00000590027 ARID3CA6NKF2 412 aa24.94■■□□□ 1.58
NFIX-212ENST00000590027 CFAP43Q8NDM7 1665 aa24.94■■□□□ 1.58
NFIX-212ENST00000590027 NUP153P49790 1475 aaKnown RBP24.91■■□□□ 1.58
NFIX-212ENST00000590027 TEX14Q8IWB6 1497 aa24.91■■□□□ 1.58
NFIX-212ENST00000590027 UBTFP17480 764 aaKnown RBP24.88■■□□□ 1.57
NFIX-212ENST00000590027 KCNH8Q96L42 1107 aa24.85■■□□□ 1.57
NFIX-212ENST00000590027 MAGI3Q5TCQ9 1506 aa24.83■■□□□ 1.57
NFIX-212ENST00000590027 CD109Q6YHK3 1445 aa24.83■■□□□ 1.57
NFIX-212ENST00000590027 ARHGAP35Q9NRY4 1499 aa24.82■■□□□ 1.56
NFIX-212ENST00000590027 COL17A1Q9UMD9 1497 aaPredicted RBP24.82■■□□□ 1.56
NFIX-212ENST00000590027 ABCA9Q8IUA7 1624 aa24.81■■□□□ 1.56
NFIX-212ENST00000590027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.76■■□□□ 1.55
NFIX-212ENST00000590027 HNRNPUL2Q1KMD3 747 aaKnown RBP24.76■■□□□ 1.55
NFIX-212ENST00000590027 HECW1Q76N89 1606 aa24.73■■□□□ 1.55
NFIX-212ENST00000590027 CDK13Q14004 1512 aaKnown RBP24.73■■□□□ 1.55
NFIX-212ENST00000590027 FMN1Q68DA7 1419 aa24.72■■□□□ 1.55
NFIX-212ENST00000590027 AEBP2Q6ZN18 517 aaPredicted RBP24.72■■□□□ 1.55
NFIX-212ENST00000590027 TTC37Q6PGP7 1564 aa24.63■■□□□ 1.53
NFIX-212ENST00000590027 LRRIQ1Q96JM4 1722 aa24.63■■□□□ 1.53
NFIX-212ENST00000590027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.62■■□□□ 1.53
NFIX-212ENST00000590027 PCF11O94913 1555 aaKnown RBP24.62■■□□□ 1.53
NFIX-212ENST00000590027 ARAP3Q8WWN8 1544 aa24.61■■□□□ 1.53
NFIX-212ENST00000590027 PLEKHD1A6NEE1 506 aa24.61■■□□□ 1.53
NFIX-212ENST00000590027 NEO1Q92859 1461 aa24.59■■□□□ 1.53
NFIX-212ENST00000590027 ATP1B4Q9UN42 357 aaPredicted RBP24.57■■□□□ 1.52
NFIX-212ENST00000590027 KDM4FA0A1W2PPD8 638 aa24.55■■□□□ 1.52
NFIX-212ENST00000590027 PHLDB1Q86UU1 1377 aa24.54■■□□□ 1.52
NFIX-212ENST00000590027 CFAP74Q9C0B2 1584 aa24.54■■□□□ 1.52
NFIX-212ENST00000590027 FRMPD1Q5SYB0 1578 aa24.54■■□□□ 1.52
NFIX-212ENST00000590027 CLIP1P30622 1438 aa24.53■■□□□ 1.52
NFIX-212ENST00000590027 ADGRL1O94910 1474 aa24.53■■□□□ 1.52
NFIX-212ENST00000590027 KIF14Q15058 1648 aa24.52■■□□□ 1.52
NFIX-212ENST00000590027 CASKIN1Q8WXD9 1431 aa24.51■■□□□ 1.51
NFIX-212ENST00000590027 FANCAO15360 1455 aa24.49■■□□□ 1.51
NFIX-212ENST00000590027 MYO5CQ9NQX4 1742 aa24.48■■□□□ 1.51
NFIX-212ENST00000590027 CCDC18Q5T9S5 1454 aa24.47■■□□□ 1.51
NFIX-212ENST00000590027 FYCO1Q9BQS8 1478 aa24.47■■□□□ 1.51
NFIX-212ENST00000590027 TROQ12816 1431 aaPredicted RBP24.47■■□□□ 1.51
NFIX-212ENST00000590027 RICTORQ6R327 1708 aa24.46■■□□□ 1.51
NFIX-212ENST00000590027 AKNAQ7Z591 1439 aa24.44■■□□□ 1.5
NFIX-212ENST00000590027 RAPGEF3O95398 923 aa24.43■■□□□ 1.5
NFIX-212ENST00000590027 CDK11AQ9UQ88 783 aaPredicted RBP24.43■■□□□ 1.5
NFIX-212ENST00000590027 DENND4BO75064 1496 aaPredicted RBP24.41■■□□□ 1.5
NFIX-212ENST00000590027 PLCH2O75038 1416 aa24.41■■□□□ 1.5
NFIX-212ENST00000590027 ARHGEF40Q8TER5 1519 aa24.39■■□□□ 1.49
NFIX-212ENST00000590027 CEP162Q5TB80 1403 aa24.36■■□□□ 1.49
NFIX-212ENST00000590027 ZMYM4Q5VZL5 1548 aa24.36■■□□□ 1.49
NFIX-212ENST00000590027 PREX2Q70Z35 1606 aa24.33■■□□□ 1.49
NFIX-212ENST00000590027 ARHGAP5Q13017 1502 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms