RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 RANGAP1P46060 587 aaPredicted RBP27.74■■■□□ 2.03
CXXC1-212ENST00000589940 FBLN2P98095 1184 aa27.69■■■□□ 2.02
CXXC1-212ENST00000589940 ARHGAP35Q9NRY4 1499 aa27.63■■■□□ 2.01
CXXC1-212ENST00000589940 IQGAP2Q13576 1575 aa27.62■■■□□ 2.01
CXXC1-212ENST00000589940 KIAA0586Q9BVV6 1533 aa27.62■■■□□ 2.01
CXXC1-212ENST00000589940 NUP160Q12769 1436 aa27.61■■■□□ 2.01
CXXC1-212ENST00000589940 CEP170Q5SW79 1584 aa27.61■■■□□ 2.01
CXXC1-212ENST00000589940 ARAP1Q96P48 1450 aa27.58■■■□□ 2.01
CXXC1-212ENST00000589940 EFCAB5A4FU69 1503 aa27.58■■■□□ 2.01
CXXC1-212ENST00000589940 CHD1O14646 1710 aa27.57■■■□□ 2
CXXC1-212ENST00000589940 VPS8Q8N3P4 1428 aa27.54■■■□□ 2
CXXC1-212ENST00000589940 SAMD9Q5K651 1589 aa27.5■■□□□ 1.99
CXXC1-212ENST00000589940 UGGT2Q9NYU1 1516 aa27.49■■□□□ 1.99
CXXC1-212ENST00000589940 P3H3Q8IVL6 736 aa27.44■■□□□ 1.98
CXXC1-212ENST00000589940 FHOD3Q2V2M9 1422 aa27.44■■□□□ 1.98
CXXC1-212ENST00000589940 JPH4Q96JJ6 628 aa27.37■■□□□ 1.97
CXXC1-212ENST00000589940 DISP1Q96F81 1524 aa27.36■■□□□ 1.97
CXXC1-212ENST00000589940 KIAA0556O60303 1618 aa27.34■■□□□ 1.97
CXXC1-212ENST00000589940 FMN1Q68DA7 1419 aa27.33■■□□□ 1.97
CXXC1-212ENST00000589940 CLASP1Q7Z460 1538 aa27.3■■□□□ 1.96
CXXC1-212ENST00000589940 CARMIL2Q6F5E8 1435 aa27.28■■□□□ 1.96
CXXC1-212ENST00000589940 SHROOM2Q13796 1616 aa27.26■■□□□ 1.95
CXXC1-212ENST00000589940 PCF11O94913 1555 aaKnown RBP27.24■■□□□ 1.95
CXXC1-212ENST00000589940 APLP2Q06481 763 aa27.24■■□□□ 1.95
CXXC1-212ENST00000589940 CASKIN1Q8WXD9 1431 aa27.23■■□□□ 1.95
CXXC1-212ENST00000589940 PRG4Q92954 1404 aaPredicted RBP27.23■■□□□ 1.95
CXXC1-212ENST00000589940 FYCO1Q9BQS8 1478 aa27.22■■□□□ 1.95
CXXC1-212ENST00000589940 PPARGC1BQ86YN6 1023 aaKnown RBP27.17■■□□□ 1.94
CXXC1-212ENST00000589940 OSCARQ8IYS5 282 aa27.17■■□□□ 1.94
CXXC1-212ENST00000589940 MAP3K1Q13233 1512 aa27.12■■□□□ 1.93
CXXC1-212ENST00000589940 ATP1B4Q9UN42 357 aaPredicted RBP27.11■■□□□ 1.93
CXXC1-212ENST00000589940 TTBK1Q5TCY1 1321 aaPredicted RBP27.09■■□□□ 1.93
CXXC1-212ENST00000589940 TIAM1Q13009 1591 aa27.08■■□□□ 1.93
CXXC1-212ENST00000589940 HECW1Q76N89 1606 aa27.06■■□□□ 1.92
CXXC1-212ENST00000589940 ERCC6L2Q5T890 1561 aa27.06■■□□□ 1.92
CXXC1-212ENST00000589940 CFAP43Q8NDM7 1665 aa27.04■■□□□ 1.92
CXXC1-212ENST00000589940 PTPRGP23470 1445 aa27.03■■□□□ 1.92
CXXC1-212ENST00000589940 RAPGEF6Q8TEU7 1601 aa27.03■■□□□ 1.92
CXXC1-212ENST00000589940 KANK4Q5T7N3 995 aaPredicted RBP27.01■■□□□ 1.91
CXXC1-212ENST00000589940 PLB1Q6P1J6 1458 aa27■■□□□ 1.91
CXXC1-212ENST00000589940 CCDC18Q5T9S5 1454 aa27■■□□□ 1.91
CXXC1-212ENST00000589940 TRIM26Q12899 539 aaPredicted RBP26.99■■□□□ 1.91
CXXC1-212ENST00000589940 LRRIQ1Q96JM4 1722 aa26.99■■□□□ 1.91
CXXC1-212ENST00000589940 NUP153P49790 1475 aaKnown RBP26.97■■□□□ 1.91
CXXC1-212ENST00000589940 LRRC9Q6ZRR7 1453 aa26.97■■□□□ 1.91
CXXC1-212ENST00000589940 EPRSP07814 1512 aaKnown RBP26.96■■□□□ 1.91
CXXC1-212ENST00000589940 ABCA8O94911 1581 aa26.96■■□□□ 1.91
CXXC1-212ENST00000589940 CDK13Q14004 1512 aaKnown RBP26.89■■□□□ 1.9
CXXC1-212ENST00000589940 UACAQ9BZF9 1416 aa26.88■■□□□ 1.89
CXXC1-212ENST00000589940 PCGF6Q9BYE7 350 aa26.86■■□□□ 1.89
CXXC1-212ENST00000589940 ARID3CA6NKF2 412 aa26.85■■□□□ 1.89
CXXC1-212ENST00000589940 MTUS2Q5JR59 1369 aa26.85■■□□□ 1.89
CXXC1-212ENST00000589940 EHBP1L1Q8N3D4 1523 aa26.81■■□□□ 1.88
CXXC1-212ENST00000589940 ABCC2Q92887 1545 aa26.81■■□□□ 1.88
CXXC1-212ENST00000589940 MAGI3Q5TCQ9 1506 aa26.8■■□□□ 1.88
CXXC1-212ENST00000589940 ATP10BO94823 1461 aa26.77■■□□□ 1.88
CXXC1-212ENST00000589940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.77■■□□□ 1.88
CXXC1-212ENST00000589940 HNRNPUL2Q1KMD3 747 aaKnown RBP26.77■■□□□ 1.88
CXXC1-212ENST00000589940 UHRF1BP1LA0JNW5 1464 aa26.77■■□□□ 1.88
CXXC1-212ENST00000589940 CDK11AQ9UQ88 783 aaPredicted RBP26.77■■□□□ 1.88
CXXC1-212ENST00000589940 ARHGEF11O15085 1522 aa26.72■■□□□ 1.87
CXXC1-212ENST00000589940 SUPT6HQ7KZ85 1726 aaKnown RBP26.71■■□□□ 1.87
CXXC1-212ENST00000589940 PHLDB1Q86UU1 1377 aa26.7■■□□□ 1.86
CXXC1-212ENST00000589940 NCOA2Q15596 1464 aa26.69■■□□□ 1.86
CXXC1-212ENST00000589940 TROQ12816 1431 aaPredicted RBP26.68■■□□□ 1.86
CXXC1-212ENST00000589940 RRBP1Q9P2E9 1410 aaKnown RBP26.66■■□□□ 1.86
CXXC1-212ENST00000589940 ADCY10Q96PN6 1610 aa26.65■■□□□ 1.86
CXXC1-212ENST00000589940 KDM5BQ9UGL1 1544 aa26.65■■□□□ 1.86
CXXC1-212ENST00000589940 PLEKHD1A6NEE1 506 aa26.64■■□□□ 1.86
CXXC1-212ENST00000589940 CCNB3Q8WWL7 1395 aa26.6■■□□□ 1.85
CXXC1-212ENST00000589940 ZCCHC11Q5TAX3 1644 aaKnown RBP26.6■■□□□ 1.85
CXXC1-212ENST00000589940 RIMBP3CA6NJZ7 1639 aa26.59■■□□□ 1.85
CXXC1-212ENST00000589940 RIMBP3BA6NNM3 1639 aa26.59■■□□□ 1.85
CXXC1-212ENST00000589940 RIMBP3Q9UFD9 1639 aa26.59■■□□□ 1.85
CXXC1-212ENST00000589940 MYOM3Q5VTT5 1437 aa26.57■■□□□ 1.84
CXXC1-212ENST00000589940 FGD6Q6ZV73 1430 aa26.54■■□□□ 1.84
CXXC1-212ENST00000589940 KIF14Q15058 1648 aa26.53■■□□□ 1.84
CXXC1-212ENST00000589940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.46■■□□□ 1.832e-6■■■■□ 21.4
CXXC1-212ENST00000589940 ABCC10Q5T3U5 1492 aa26.46■■□□□ 1.83
CXXC1-212ENST00000589940 MIA2Q96PC5 1412 aa26.46■■□□□ 1.83
CXXC1-212ENST00000589940 CYB5RLQ6IPT4 315 aa26.45■■□□□ 1.82
CXXC1-212ENST00000589940 NPM1P06748 294 aaKnown RBP eCLIP26.44■■□□□ 1.82
CXXC1-212ENST00000589940 FAM50AQ14320 339 aaKnown RBP26.43■■□□□ 1.82
CXXC1-212ENST00000589940 GPATCH8Q9UKJ3 1502 aaKnown RBP26.42■■□□□ 1.82
CXXC1-212ENST00000589940 WDR7Q9Y4E6 1490 aa26.41■■□□□ 1.82
CXXC1-212ENST00000589940 PTPN23Q9H3S7 1636 aa26.41■■□□□ 1.82
CXXC1-212ENST00000589940 ITSN2Q9NZM3 1697 aa26.4■■□□□ 1.82
CXXC1-212ENST00000589940 TCOF1Q13428 1488 aaKnown RBP26.39■■□□□ 1.82
CXXC1-212ENST00000589940 ASXL2Q76L83 1435 aa26.38■■□□□ 1.81
CXXC1-212ENST00000589940 KCNH8Q96L42 1107 aa26.37■■□□□ 1.81
CXXC1-212ENST00000589940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.36■■□□□ 1.81
CXXC1-212ENST00000589940 CDC42BPAQ5VT25 1732 aa26.34■■□□□ 1.81
CXXC1-212ENST00000589940 CFDP1Q9UEE9 299 aaPredicted RBP26.34■■□□□ 1.81
CXXC1-212ENST00000589940 TTC37Q6PGP7 1564 aa26.34■■□□□ 1.81
CXXC1-212ENST00000589940 ITGAEP38570 1179 aa26.32■■□□□ 1.8
CXXC1-212ENST00000589940 PREX2Q70Z35 1606 aa26.28■■□□□ 1.8
CXXC1-212ENST00000589940 MAPKBP1O60336 1514 aa26.26■■□□□ 1.79
CXXC1-212ENST00000589940 CAMSAP2Q08AD1 1489 aa26.26■■□□□ 1.79
CXXC1-212ENST00000589940 ZNF644Q9H582 1327 aaPredicted RBP26.25■■□□□ 1.79
CXXC1-212ENST00000589940 MYO5CQ9NQX4 1742 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms