RNA–Protein interactions for RNA: ENST00000589727.5

ATP6V0A1-222, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 5

Gene ATP6V0A1, Length 664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-222	ENST00000589727	MRC2	Q9UBG0	1479 aa		14.3	□□□□□ -0.12
ATP6V0A1-222	ENST00000589727	WDR62	O43379	1518 aa		14.25	□□□□□ -0.13
ATP6V0A1-222	ENST00000589727	SPDYE1	Q8NFV5	336 aa	Predicted RBP	14.22	□□□□□ -0.13
ATP6V0A1-222	ENST00000589727	CLEC11A	Q9Y240	323 aa		14.21	□□□□□ -0.13
ATP6V0A1-222	ENST00000589727	BAZ1B	Q9UIG0	1483 aa	Known RBP	14.2	□□□□□ -0.14
ATP6V0A1-222	ENST00000589727	PIP4P2	Q8N4L2	257 aa		14.19	□□□□□ -0.14
ATP6V0A1-222	ENST00000589727	FXR2	P51116	673 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
ATP6V0A1-222	ENST00000589727	CADPS	Q9ULU8	1353 aa		14.12	□□□□□ -0.15
ATP6V0A1-222	ENST00000589727	SPDYE4	A6NLX3	237 aa		14.12	□□□□□ -0.15
ATP6V0A1-222	ENST00000589727	ARAP1	Q96P48	1450 aa		14.1	□□□□□ -0.15
ATP6V0A1-222	ENST00000589727	SMARCA4	P51532	1647 aa		14.06	□□□□□ -0.16
ATP6V0A1-222	ENST00000589727	CEP164	Q9UPV0	1460 aa		14.04	□□□□□ -0.16
ATP6V0A1-222	ENST00000589727	PRR29	P0C7W0	189 aa		14	□□□□□ -0.17
ATP6V0A1-222	ENST00000589727	PRKAR2A	P13861	404 aa	Known RBP	13.99	□□□□□ -0.17
ATP6V0A1-222	ENST00000589727	FANCD2	Q9BXW9	1451 aa		13.93	□□□□□ -0.18
ATP6V0A1-222	ENST00000589727	RSF1	Q96T23	1441 aa	Predicted RBP	13.93	□□□□□ -0.18
ATP6V0A1-222	ENST00000589727	PEG3	Q9GZU2	1588 aa		13.92	□□□□□ -0.18
ATP6V0A1-222	ENST00000589727	HAX1	O00165	279 aa		13.89	□□□□□ -0.19
ATP6V0A1-222	ENST00000589727	STAG3	Q9UJ98	1225 aa		13.89	□□□□□ -0.19
ATP6V0A1-222	ENST00000589727	CHADL	Q6NUI6	762 aa		13.88	□□□□□ -0.19
ATP6V0A1-222	ENST00000589727	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.87	□□□□□ -0.19
ATP6V0A1-222	ENST00000589727	URB2	Q14146	1524 aa	Known RBP	13.86	□□□□□ -0.19
ATP6V0A1-222	ENST00000589727	IFT140	Q96RY7	1462 aa		13.8	□□□□□ -0.2
ATP6V0A1-222	ENST00000589727	KDM4F	A0A1W2PPD8	638 aa		13.77	□□□□□ -0.21
ATP6V0A1-222	ENST00000589727	PROM2	Q8N271	834 aa		13.77	□□□□□ -0.21
ATP6V0A1-222	ENST00000589727	SP7	Q8TDD2	431 aa	Predicted RBP	13.76	□□□□□ -0.21
ATP6V0A1-222	ENST00000589727	CHD1	O14646	1710 aa		13.72	□□□□□ -0.21
ATP6V0A1-222	ENST00000589727	EVX2	Q03828	476 aa		13.71	□□□□□ -0.21
ATP6V0A1-222	ENST00000589727	FKBP8	Q14318	412 aa		13.71	□□□□□ -0.21
ATP6V0A1-222	ENST00000589727	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.71	□□□□□ -0.21
ATP6V0A1-222	ENST00000589727	CFTR	P13569	1480 aa		13.71	□□□□□ -0.21
ATP6V0A1-222	ENST00000589727	MROH2B	Q7Z745	1585 aa		13.71	□□□□□ -0.22
ATP6V0A1-222	ENST00000589727	C19orf67	A6NJJ6	358 aa		13.69	□□□□□ -0.22
ATP6V0A1-222	ENST00000589727	CREBZF	Q9NS37	354 aa		13.69	□□□□□ -0.22
ATP6V0A1-222	ENST00000589727	EIF4G3	O43432	1585 aa	Known RBP	13.68	□□□□□ -0.22
ATP6V0A1-222	ENST00000589727	FBXO41	Q8TF61	875 aa		13.68	□□□□□ -0.22
ATP6V0A1-222	ENST00000589727	AQR	O60306	1485 aa	Known RBP eCLIP	13.65	□□□□□ -0.22	2e-9	■■■■■ 39.7
ATP6V0A1-222	ENST00000589727	GAPVD1	Q14C86	1478 aa		13.61	□□□□□ -0.23
ATP6V0A1-222	ENST00000589727	LMTK3	Q96Q04	1460 aa		13.61	□□□□□ -0.23
ATP6V0A1-222	ENST00000589727	CLASP1	Q7Z460	1538 aa		13.6	□□□□□ -0.23
ATP6V0A1-222	ENST00000589727	ERCC6L2	Q5T890	1561 aa		13.58	□□□□□ -0.24
ATP6V0A1-222	ENST00000589727	SOCS7	O14512	581 aa		13.56	□□□□□ -0.24
ATP6V0A1-222	ENST00000589727	CD44	P16070	742 aa	Known RBP	13.55	□□□□□ -0.24
ATP6V0A1-222	ENST00000589727	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.55	□□□□□ -0.24
ATP6V0A1-222	ENST00000589727	TOPBP1	Q92547	1522 aa		13.54	□□□□□ -0.24
ATP6V0A1-222	ENST00000589727	SYNJ1	O43426	1573 aa		13.53	□□□□□ -0.24
ATP6V0A1-222	ENST00000589727	HECW2	Q9P2P5	1572 aa		13.49	□□□□□ -0.25
ATP6V0A1-222	ENST00000589727	NPM1	P06748	294 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
ATP6V0A1-222	ENST00000589727	MNX1	P50219	401 aa	Predicted RBP	13.48	□□□□□ -0.25
ATP6V0A1-222	ENST00000589727	ABCC8	Q09428	1581 aa		13.46	□□□□□ -0.25
ATP6V0A1-222	ENST00000589727	MIER1	Q8N108	512 aa		13.46	□□□□□ -0.25
ATP6V0A1-222	ENST00000589727	SNAPC4	Q5SXM2	1469 aa		13.46	□□□□□ -0.25
ATP6V0A1-222	ENST00000589727	FAM69C	Q0P6D2	419 aa		13.45	□□□□□ -0.26
ATP6V0A1-222	ENST00000589727	TARBP1	Q13395	1621 aa	Known RBP	13.44	□□□□□ -0.26
ATP6V0A1-222	ENST00000589727	WIZ	O95785	1651 aa		13.44	□□□□□ -0.26
ATP6V0A1-222	ENST00000589727	PLEKHG5	O94827	1062 aa		13.43	□□□□□ -0.26
ATP6V0A1-222	ENST00000589727	ILDR2	Q71H61	639 aa		13.43	□□□□□ -0.26
ATP6V0A1-222	ENST00000589727	TDRD9	Q8NDG6	1382 aa	Known RBP	13.43	□□□□□ -0.26
ATP6V0A1-222	ENST00000589727	GABBR2	O75899	941 aa		13.42	□□□□□ -0.26
ATP6V0A1-222	ENST00000589727	KIF13A	Q9H1H9	1805 aa		13.41	□□□□□ -0.26
ATP6V0A1-222	ENST00000589727	ZRANB1	Q9UGI0	708 aa		13.41	□□□□□ -0.26
ATP6V0A1-222	ENST00000589727	SYNJ2	O15056	1496 aa		13.4	□□□□□ -0.26
ATP6V0A1-222	ENST00000589727	PLCD3	Q8N3E9	789 aa		13.39	□□□□□ -0.27
ATP6V0A1-222	ENST00000589727	ADGRL1	O94910	1474 aa		13.39	□□□□□ -0.27
ATP6V0A1-222	ENST00000589727	KDM6B	O15054	1643 aa		13.39	□□□□□ -0.27
ATP6V0A1-222	ENST00000589727	PAK3	O75914	559 aa	Predicted RBP	13.38	□□□□□ -0.27
ATP6V0A1-222	ENST00000589727	DNMBP	Q6XZF7	1577 aa		13.37	□□□□□ -0.27
ATP6V0A1-222	ENST00000589727	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.37	□□□□□ -0.27
ATP6V0A1-222	ENST00000589727	DISP3	Q9P2K9	1392 aa		13.35	□□□□□ -0.27
ATP6V0A1-222	ENST00000589727	FBXO3	Q9UK99	471 aa		13.35	□□□□□ -0.27
ATP6V0A1-222	ENST00000589727	POLA1	P09884	1462 aa	Predicted RBP	13.35	□□□□□ -0.27
ATP6V0A1-222	ENST00000589727	ZNF579	Q8NAF0	562 aa	Known RBP	13.34	□□□□□ -0.27
ATP6V0A1-222	ENST00000589727	ABCC10	Q5T3U5	1492 aa		13.34	□□□□□ -0.27
ATP6V0A1-222	ENST00000589727	RAD54L2	Q9Y4B4	1467 aa		13.33	□□□□□ -0.28
ATP6V0A1-222	ENST00000589727	CLCN6	P51797	869 aa		13.31	□□□□□ -0.28
ATP6V0A1-222	ENST00000589727	SOGA1	O94964	1423 aa		13.3	□□□□□ -0.28
ATP6V0A1-222	ENST00000589727	PRDM2	Q13029	1718 aa		13.3	□□□□□ -0.28
ATP6V0A1-222	ENST00000589727	GRIN2B	Q13224	1484 aa		13.29	□□□□□ -0.28
ATP6V0A1-222	ENST00000589727	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.25	□□□□□ -0.29
ATP6V0A1-222	ENST00000589727	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.25	□□□□□ -0.29
ATP6V0A1-222	ENST00000589727	PHF12	Q96QT6	1004 aa		13.24	□□□□□ -0.29
ATP6V0A1-222	ENST00000589727	WDR97	A6NE52	1622 aa		13.24	□□□□□ -0.29
ATP6V0A1-222	ENST00000589727	TOP2A	P11388	1531 aa	Known RBP	13.23	□□□□□ -0.29
ATP6V0A1-222	ENST00000589727	DIP2B	Q9P265	1576 aa		13.22	□□□□□ -0.29
ATP6V0A1-222	ENST00000589727	CEP170	Q5SW79	1584 aa		13.21	□□□□□ -0.29
ATP6V0A1-222	ENST00000589727	RASEF	Q8IZ41	740 aa		13.19	□□□□□ -0.3
ATP6V0A1-222	ENST00000589727	MAPKBP1	O60336	1514 aa		13.18	□□□□□ -0.3
ATP6V0A1-222	ENST00000589727	GALR2	O43603	387 aa	Predicted RBP	13.16	□□□□□ -0.3
ATP6V0A1-222	ENST00000589727	VASP	P50552	380 aa	Predicted RBP	13.16	□□□□□ -0.3
ATP6V0A1-222	ENST00000589727	DCBLD2	Q96PD2	775 aa		13.15	□□□□□ -0.3
ATP6V0A1-222	ENST00000589727	CCDC61	Q9Y6R9	512 aa		13.14	□□□□□ -0.31
ATP6V0A1-222	ENST00000589727	CCDC88B	A6NC98	1476 aa		13.14	□□□□□ -0.31
ATP6V0A1-222	ENST00000589727	NUBP1	P53384	320 aa		13.13	□□□□□ -0.31
ATP6V0A1-222	ENST00000589727	TSPOAP1	O95153	1857 aa		13.12	□□□□□ -0.31
ATP6V0A1-222	ENST00000589727	FGD5	Q6ZNL6	1462 aa		13.12	□□□□□ -0.31
ATP6V0A1-222	ENST00000589727	POTEI	P0CG38	1075 aa		13.12	□□□□□ -0.31
ATP6V0A1-222	ENST00000589727	GRIN2A	Q12879	1464 aa		13.1	□□□□□ -0.31
ATP6V0A1-222	ENST00000589727	NUP160	Q12769	1436 aa		13.1	□□□□□ -0.31
ATP6V0A1-222	ENST00000589727	PRG4	Q92954	1404 aa	Predicted RBP	13.09	□□□□□ -0.31
ATP6V0A1-222	ENST00000589727	KLHL34	Q8N239	644 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms