RNA–Protein interactions for RNA: ENST00000589305.5

RDH13-213, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-213ENST00000589305 KIAA0586Q9BVV6 1533 aa32.62■■■□□ 2.81
RDH13-213ENST00000589305 ARAP1Q96P48 1450 aa32.61■■■□□ 2.81
RDH13-213ENST00000589305 EEA1Q15075 1411 aa32.6■■■□□ 2.81
RDH13-213ENST00000589305 SHROOM2Q13796 1616 aa32.6■■■□□ 2.81
RDH13-213ENST00000589305 CSRNP3Q8WYN3 585 aa32.58■■■□□ 2.81
RDH13-213ENST00000589305 PRXQ9BXM0 1461 aa32.53■■■□□ 2.8
RDH13-213ENST00000589305 PRG4Q92954 1404 aaPredicted RBP32.51■■■□□ 2.8
RDH13-213ENST00000589305 ERCC6L2Q5T890 1561 aa32.48■■■□□ 2.79
RDH13-213ENST00000589305 FAM9AQ8IZU1 332 aaPredicted RBP32.42■■■□□ 2.78
RDH13-213ENST00000589305 IQGAP2Q13576 1575 aa32.4■■■□□ 2.78
RDH13-213ENST00000589305 CARMIL2Q6F5E8 1435 aa32.3■■■□□ 2.76
RDH13-213ENST00000589305 CTTNBP2Q8WZ74 1663 aa32.25■■■□□ 2.75
RDH13-213ENST00000589305 UGGT2Q9NYU1 1516 aa32.24■■■□□ 2.75
RDH13-213ENST00000589305 KIF21BO75037 1637 aa32.18■■■□□ 2.74
RDH13-213ENST00000589305 TNIKQ9UKE5 1360 aa32.18■■■□□ 2.74
RDH13-213ENST00000589305 DISP1Q96F81 1524 aa32.16■■■□□ 2.74
RDH13-213ENST00000589305 PTPRGP23470 1445 aa32.16■■■□□ 2.74
RDH13-213ENST00000589305 GOLGA3Q08378 1498 aa32.11■■■□□ 2.73
RDH13-213ENST00000589305 KIAA0556O60303 1618 aa32.07■■■□□ 2.72
RDH13-213ENST00000589305 TTBK1Q5TCY1 1321 aaPredicted RBP32.06■■■□□ 2.72
RDH13-213ENST00000589305 NPM1P06748 294 aaKnown RBP eCLIP32.01■■■□□ 2.71
RDH13-213ENST00000589305 UBTFP17480 764 aaKnown RBP32■■■□□ 2.71
RDH13-213ENST00000589305 TRHP20396 242 aaPredicted RBP31.97■■■□□ 2.71
RDH13-213ENST00000589305 EHMT2Q96KQ7 1210 aa31.97■■■□□ 2.71
RDH13-213ENST00000589305 ADCY10Q96PN6 1610 aa31.95■■■□□ 2.71
RDH13-213ENST00000589305 UACAQ9BZF9 1416 aa31.93■■■□□ 2.7
RDH13-213ENST00000589305 UHRF1BP1LA0JNW5 1464 aa31.9■■■□□ 2.7
RDH13-213ENST00000589305 P3H3Q8IVL6 736 aa31.89■■■□□ 2.7
RDH13-213ENST00000589305 RANGAP1P46060 587 aaPredicted RBP31.88■■■□□ 2.69
RDH13-213ENST00000589305 SAMD9Q5K651 1589 aa31.87■■■□□ 2.69
RDH13-213ENST00000589305 ABCC2Q92887 1545 aa31.84■■■□□ 2.69
RDH13-213ENST00000589305 MAPKBP1O60336 1514 aa31.79■■■□□ 2.68
RDH13-213ENST00000589305 EFCAB5A4FU69 1503 aa31.78■■■□□ 2.68
RDH13-213ENST00000589305 PLB1Q6P1J6 1458 aa31.77■■■□□ 2.68
RDH13-213ENST00000589305 ABCA8O94911 1581 aa31.73■■■□□ 2.67
RDH13-213ENST00000589305 KDM5BQ9UGL1 1544 aa31.73■■■□□ 2.67
RDH13-213ENST00000589305 FHOD3Q2V2M9 1422 aa31.7■■■□□ 2.67
RDH13-213ENST00000589305 ABCC10Q5T3U5 1492 aa31.65■■■□□ 2.66
RDH13-213ENST00000589305 ASXL2Q76L83 1435 aa31.63■■■□□ 2.65
RDH13-213ENST00000589305 FAM69CQ0P6D2 419 aa31.62■■■□□ 2.65
RDH13-213ENST00000589305 ZCCHC11Q5TAX3 1644 aaKnown RBP31.61■■■□□ 2.65
RDH13-213ENST00000589305 ARHGAP35Q9NRY4 1499 aa31.6■■■□□ 2.65
RDH13-213ENST00000589305 RAPGEF6Q8TEU7 1601 aa31.57■■■□□ 2.64
RDH13-213ENST00000589305 KIF13AQ9H1H9 1805 aa31.55■■■□□ 2.64
RDH13-213ENST00000589305 DIP2BQ9P265 1576 aa31.55■■■□□ 2.64
RDH13-213ENST00000589305 FMN1Q68DA7 1419 aa31.52■■■□□ 2.64
RDH13-213ENST00000589305 ATP10BO94823 1461 aa31.51■■■□□ 2.63
RDH13-213ENST00000589305 ARID3CA6NKF2 412 aa31.48■■■□□ 2.63
RDH13-213ENST00000589305 NUP153P49790 1475 aaKnown RBP31.46■■■□□ 2.63
RDH13-213ENST00000589305 WDR7Q9Y4E6 1490 aa31.46■■■□□ 2.63
RDH13-213ENST00000589305 CLIP1P30622 1438 aa31.46■■■□□ 2.63
RDH13-213ENST00000589305 EPRSP07814 1512 aaKnown RBP31.44■■■□□ 2.62
RDH13-213ENST00000589305 GLI2P10070 1586 aa31.43■■■□□ 2.62
RDH13-213ENST00000589305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.43■■■□□ 2.62
RDH13-213ENST00000589305 HNRNPUL2Q1KMD3 747 aaKnown RBP31.43■■■□□ 2.62
RDH13-213ENST00000589305 LOC105371045A0A1W2PR82 267 aa31.42■■■□□ 2.62
RDH13-213ENST00000589305 KCNH8Q96L42 1107 aa31.37■■■□□ 2.61
RDH13-213ENST00000589305 ATP1B4Q9UN42 357 aaPredicted RBP31.35■■■□□ 2.61
RDH13-213ENST00000589305 PLEKHD1A6NEE1 506 aa31.31■■■□□ 2.6
RDH13-213ENST00000589305 CEP162Q5TB80 1403 aa31.31■■■□□ 2.6
RDH13-213ENST00000589305 HECW1Q76N89 1606 aa31.31■■■□□ 2.6
RDH13-213ENST00000589305 CASKIN1Q8WXD9 1431 aa31.26■■■□□ 2.6
RDH13-213ENST00000589305 TSPOAP1O95153 1857 aa31.25■■■□□ 2.59
RDH13-213ENST00000589305 MAP3K4Q9Y6R4 1608 aa31.24■■■□□ 2.59
RDH13-213ENST00000589305 CDK11AQ9UQ88 783 aaPredicted RBP31.22■■■□□ 2.59
RDH13-213ENST00000589305 CDK13Q14004 1512 aaKnown RBP31.22■■■□□ 2.59
RDH13-213ENST00000589305 CD109Q6YHK3 1445 aa31.21■■■□□ 2.59
RDH13-213ENST00000589305 CFAP43Q8NDM7 1665 aa31.18■■■□□ 2.58
RDH13-213ENST00000589305 TEX14Q8IWB6 1497 aa31.17■■■□□ 2.58
RDH13-213ENST00000589305 FYCO1Q9BQS8 1478 aa31.17■■■□□ 2.58
RDH13-213ENST00000589305 PCF11O94913 1555 aaKnown RBP31.17■■■□□ 2.58
RDH13-213ENST00000589305 PPRC1Q5VV67 1664 aaKnown RBP31.16■■■□□ 2.58
RDH13-213ENST00000589305 MAGI3Q5TCQ9 1506 aa31.14■■■□□ 2.57
RDH13-213ENST00000589305 CCDC18Q5T9S5 1454 aa31.13■■■□□ 2.57
RDH13-213ENST00000589305 ABCA9Q8IUA7 1624 aa31.12■■■□□ 2.57
RDH13-213ENST00000589305 LRRIQ1Q96JM4 1722 aa31.07■■■□□ 2.56
RDH13-213ENST00000589305 KDM6BO15054 1643 aa31.05■■■□□ 2.56
RDH13-213ENST00000589305 TROQ12816 1431 aaPredicted RBP31.04■■■□□ 2.56
RDH13-213ENST00000589305 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31■■■□□ 2.55
RDH13-213ENST00000589305 PHLDB1Q86UU1 1377 aa30.97■■■□□ 2.55
RDH13-213ENST00000589305 VPS8Q8N3P4 1428 aa30.95■■■□□ 2.54
RDH13-213ENST00000589305 KIF14Q15058 1648 aa30.92■■■□□ 2.54
RDH13-213ENST00000589305 COL17A1Q9UMD9 1497 aaPredicted RBP30.92■■■□□ 2.54
RDH13-213ENST00000589305 TTC37Q6PGP7 1564 aa30.92■■■□□ 2.54
RDH13-213ENST00000589305 NEO1Q92859 1461 aa30.91■■■□□ 2.54
RDH13-213ENST00000589305 PLCH2O75038 1416 aa30.88■■■□□ 2.53
RDH13-213ENST00000589305 ARAP3Q8WWN8 1544 aa30.87■■■□□ 2.53
RDH13-213ENST00000589305 FANCAO15360 1455 aa30.83■■■□□ 2.53
RDH13-213ENST00000589305 MTUS2Q5JR59 1369 aa30.83■■■□□ 2.53
RDH13-213ENST00000589305 CFAP74Q9C0B2 1584 aa30.8■■■□□ 2.52
RDH13-213ENST00000589305 EFCAB2Q5VUJ9 269 aa30.8■■■□□ 2.52
RDH13-213ENST00000589305 AKNAQ7Z591 1439 aa30.8■■■□□ 2.52
RDH13-213ENST00000589305 MYO5CQ9NQX4 1742 aa30.78■■■□□ 2.52
RDH13-213ENST00000589305 EHBP1L1Q8N3D4 1523 aa30.73■■■□□ 2.51
RDH13-213ENST00000589305 TIAM1Q13009 1591 aa30.72■■■□□ 2.51
RDH13-213ENST00000589305 RAPGEF3O95398 923 aa30.71■■■□□ 2.51
RDH13-213ENST00000589305 ARHGAP5Q13017 1502 aa30.7■■■□□ 2.51
RDH13-213ENST00000589305 MAP3K1Q13233 1512 aa30.7■■■□□ 2.51
RDH13-213ENST00000589305 DENND4BO75064 1496 aaPredicted RBP30.7■■■□□ 2.5
RDH13-213ENST00000589305 APLP2Q06481 763 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms