RNA–Protein interactions for RNA: ENST00000589296.5

CYTH1-209, Transcript of cytohesin 1, humanhuman

TSL 5 BASIC

Gene CYTH1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-209ENST00000589296 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.139e-7■■■■■ 31.4
CYTH1-209ENST00000589296 PBRM1Q86U86 1689 aa28.32■■■□□ 2.12
CYTH1-209ENST00000589296 GRIN2BQ13224 1484 aa28.3■■■□□ 2.12
CYTH1-209ENST00000589296 ACIN1Q9UKV3 1341 aaKnown RBP28.3■■■□□ 2.12
CYTH1-209ENST00000589296 ZNF608Q9ULD9 1512 aaPredicted RBP28.27■■■□□ 2.12
CYTH1-209ENST00000589296 APLP2Q06481 763 aa28.26■■■□□ 2.11
CYTH1-209ENST00000589296 CENPBP07199 599 aaPredicted RBP28.24■■■□□ 2.11
CYTH1-209ENST00000589296 FHAD1B1AJZ9 1412 aa28.23■■■□□ 2.11
CYTH1-209ENST00000589296 ZNF316A6NFI3 1004 aaPredicted RBP28.23■■■□□ 2.11
CYTH1-209ENST00000589296 EIF4G3O43432 1585 aaKnown RBP28.2■■■□□ 2.1
CYTH1-209ENST00000589296 ARAP1Q96P48 1450 aa28.19■■■□□ 2.1
CYTH1-209ENST00000589296 ADAMTS12P58397 1594 aa28.19■■■□□ 2.1
CYTH1-209ENST00000589296 ARHGAP35Q9NRY4 1499 aa28.17■■■□□ 2.1
CYTH1-209ENST00000589296 CTTNBP2Q8WZ74 1663 aa28.17■■■□□ 2.1
CYTH1-209ENST00000589296 NEUROD1Q13562 356 aa28.13■■■□□ 2.09
CYTH1-209ENST00000589296 HNRNPUL2Q1KMD3 747 aaKnown RBP28.12■■■□□ 2.09
CYTH1-209ENST00000589296 SNAPC4Q5SXM2 1469 aa28.09■■■□□ 2.09
CYTH1-209ENST00000589296 MAGI1Q96QZ7 1491 aaPredicted RBP28.06■■■□□ 2.08
CYTH1-209ENST00000589296 EFCAB5A4FU69 1503 aa28.05■■■□□ 2.08
CYTH1-209ENST00000589296 GRIN2AQ12879 1464 aa27.95■■■□□ 2.06
CYTH1-209ENST00000589296 SYNJ2O15056 1496 aa27.94■■■□□ 2.06
CYTH1-209ENST00000589296 CLSPNQ9HAW4 1339 aa27.93■■■□□ 2.06
CYTH1-209ENST00000589296 IQGAP2Q13576 1575 aa27.91■■■□□ 2.06
CYTH1-209ENST00000589296 CHMP7Q8WUX9 453 aaPredicted RBP27.9■■■□□ 2.06
CYTH1-209ENST00000589296 P3H3Q8IVL6 736 aa27.89■■■□□ 2.06
CYTH1-209ENST00000589296 GTF3C3Q9Y5Q9 886 aa27.89■■■□□ 2.06
CYTH1-209ENST00000589296 SAMD9Q5K651 1589 aa27.88■■■□□ 2.05
CYTH1-209ENST00000589296 FHOD3Q2V2M9 1422 aa27.88■■■□□ 2.05
CYTH1-209ENST00000589296 KIAA0586Q9BVV6 1533 aa27.84■■■□□ 2.05
CYTH1-209ENST00000589296 FMN1Q68DA7 1419 aa27.82■■■□□ 2.04
CYTH1-209ENST00000589296 FBLN2P98095 1184 aa27.8■■■□□ 2.04
CYTH1-209ENST00000589296 UGGT2Q9NYU1 1516 aa27.77■■■□□ 2.04
CYTH1-209ENST00000589296 MAP3K1Q13233 1512 aa27.77■■■□□ 2.04
CYTH1-209ENST00000589296 RRBP1Q9P2E9 1410 aaKnown RBP27.76■■■□□ 2.03
CYTH1-209ENST00000589296 FYCO1Q9BQS8 1478 aa27.75■■■□□ 2.03
CYTH1-209ENST00000589296 PCF11O94913 1555 aaKnown RBP27.75■■■□□ 2.03
CYTH1-209ENST00000589296 CASKIN1Q8WXD9 1431 aa27.75■■■□□ 2.03
CYTH1-209ENST00000589296 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
CYTH1-209ENST00000589296 NUP160Q12769 1436 aa27.73■■■□□ 2.03
CYTH1-209ENST00000589296 DHX57Q6P158 1386 aaKnown RBP27.73■■■□□ 2.03
CYTH1-209ENST00000589296 MIER1Q8N108 512 aa27.71■■■□□ 2.03
CYTH1-209ENST00000589296 KANK4Q5T7N3 995 aaPredicted RBP27.7■■■□□ 2.03
CYTH1-209ENST00000589296 TIAM1Q13009 1591 aa27.7■■■□□ 2.02
CYTH1-209ENST00000589296 ATP1B4Q9UN42 357 aaPredicted RBP27.66■■■□□ 2.02
CYTH1-209ENST00000589296 CFAP43Q8NDM7 1665 aa27.63■■■□□ 2.01
CYTH1-209ENST00000589296 KIAA0556O60303 1618 aa27.61■■■□□ 2.01
CYTH1-209ENST00000589296 DISP1Q96F81 1524 aa27.6■■■□□ 2.01
CYTH1-209ENST00000589296 CCNB3Q8WWL7 1395 aa27.6■■■□□ 2.01
CYTH1-209ENST00000589296 YTHDC1Q96MU7 727 aaKnown RBP27.59■■■□□ 2.01
CYTH1-209ENST00000589296 LRRC9Q6ZRR7 1453 aa27.58■■■□□ 2.01
CYTH1-209ENST00000589296 JPH4Q96JJ6 628 aa27.55■■■□□ 2
CYTH1-209ENST00000589296 CHD1O14646 1710 aa27.54■■■□□ 2
CYTH1-209ENST00000589296 CARMIL2Q6F5E8 1435 aa27.53■■■□□ 2
CYTH1-209ENST00000589296 HECW1Q76N89 1606 aa27.5■■□□□ 1.99
CYTH1-209ENST00000589296 CCDC18Q5T9S5 1454 aa27.48■■□□□ 1.99
CYTH1-209ENST00000589296 LRRIQ1Q96JM4 1722 aa27.41■■□□□ 1.98
CYTH1-209ENST00000589296 MTUS2Q5JR59 1369 aa27.4■■□□□ 1.98
CYTH1-209ENST00000589296 EPRSP07814 1512 aaKnown RBP27.37■■□□□ 1.97
CYTH1-209ENST00000589296 RAPGEF6Q8TEU7 1601 aa27.36■■□□□ 1.97
CYTH1-209ENST00000589296 PRG4Q92954 1404 aaPredicted RBP27.35■■□□□ 1.97
CYTH1-209ENST00000589296 EHBP1L1Q8N3D4 1523 aa27.34■■□□□ 1.97
CYTH1-209ENST00000589296 PHLDB1Q86UU1 1377 aa27.31■■□□□ 1.96
CYTH1-209ENST00000589296 SHROOM2Q13796 1616 aa27.31■■□□□ 1.96
CYTH1-209ENST00000589296 RAB3GAP2Q9H2M9 1393 aa27.31■■□□□ 1.96
CYTH1-209ENST00000589296 NUP153P49790 1475 aaKnown RBP27.29■■□□□ 1.96
CYTH1-209ENST00000589296 ITGAEP38570 1179 aa27.28■■□□□ 1.96
CYTH1-209ENST00000589296 CDK13Q14004 1512 aaKnown RBP27.27■■□□□ 1.96
CYTH1-209ENST00000589296 SETD5Q9C0A6 1442 aa27.27■■□□□ 1.96
CYTH1-209ENST00000589296 CLASP1Q7Z460 1538 aa27.25■■□□□ 1.95
CYTH1-209ENST00000589296 SUPT6HQ7KZ85 1726 aaKnown RBP27.25■■□□□ 1.95
CYTH1-209ENST00000589296 PLB1Q6P1J6 1458 aa27.25■■□□□ 1.95
CYTH1-209ENST00000589296 MAGI3Q5TCQ9 1506 aa27.22■■□□□ 1.95
CYTH1-209ENST00000589296 NCOA2Q15596 1464 aa27.22■■□□□ 1.95
CYTH1-209ENST00000589296 MAPKBP1O60336 1514 aa27.22■■□□□ 1.95
CYTH1-209ENST00000589296 PTPRGP23470 1445 aa27.21■■□□□ 1.95
CYTH1-209ENST00000589296 CDK11AQ9UQ88 783 aaPredicted RBP27.21■■□□□ 1.95
CYTH1-209ENST00000589296 ARID3CA6NKF2 412 aa27.2■■□□□ 1.94
CYTH1-209ENST00000589296 ABCA8O94911 1581 aa27.2■■□□□ 1.94
CYTH1-209ENST00000589296 ARHGEF11O15085 1522 aa27.15■■□□□ 1.94
CYTH1-209ENST00000589296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.15■■□□□ 1.943e-6■■■□□ 15.1
CYTH1-209ENST00000589296 FGD6Q6ZV73 1430 aa27.14■■□□□ 1.94
CYTH1-209ENST00000589296 MYOM3Q5VTT5 1437 aa27.14■■□□□ 1.93
CYTH1-209ENST00000589296 FAM50AQ14320 339 aaKnown RBP27.13■■□□□ 1.93
CYTH1-209ENST00000589296 TIMELESSQ9UNS1 1208 aa27.11■■□□□ 1.93
CYTH1-209ENST00000589296 MYT1Q01538 1121 aa27.08■■□□□ 1.93
CYTH1-209ENST00000589296 ERCC6L2Q5T890 1561 aa27.07■■□□□ 1.92
CYTH1-209ENST00000589296 TROQ12816 1431 aaPredicted RBP27.06■■□□□ 1.92
CYTH1-209ENST00000589296 UACAQ9BZF9 1416 aa27.05■■□□□ 1.92
CYTH1-209ENST00000589296 ATP10BO94823 1461 aa27.03■■□□□ 1.92
CYTH1-209ENST00000589296 OSCARQ8IYS5 282 aa27■■□□□ 1.91
CYTH1-209ENST00000589296 MIA2Q96PC5 1412 aa27■■□□□ 1.91
CYTH1-209ENST00000589296 PLEKHD1A6NEE1 506 aa26.98■■□□□ 1.91
CYTH1-209ENST00000589296 PTPN23Q9H3S7 1636 aa26.98■■□□□ 1.91
CYTH1-209ENST00000589296 ABCC2Q92887 1545 aa26.96■■□□□ 1.91
CYTH1-209ENST00000589296 ADCY10Q96PN6 1610 aa26.96■■□□□ 1.91
CYTH1-209ENST00000589296 TCOF1Q13428 1488 aaKnown RBP26.95■■□□□ 1.9
CYTH1-209ENST00000589296 SIN3AQ96ST3 1273 aa26.9■■□□□ 1.9
CYTH1-209ENST00000589296 UHRF1BP1LA0JNW5 1464 aa26.89■■□□□ 1.9
CYTH1-209ENST00000589296 SUPT16HQ9Y5B9 1047 aaKnown RBP26.89■■□□□ 1.9
CYTH1-209ENST00000589296 KIF14Q15058 1648 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms