RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 JPH4Q96JJ6 628 aa19.8■□□□□ 0.76
DNMT1-218ENST00000589294 CLASP1Q7Z460 1538 aa19.8■□□□□ 0.76
DNMT1-218ENST00000589294 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
DNMT1-218ENST00000589294 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
DNMT1-218ENST00000589294 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
DNMT1-218ENST00000589294 IQGAP2Q13576 1575 aa19.72■□□□□ 0.75
DNMT1-218ENST00000589294 TNIKQ9UKE5 1360 aa19.71■□□□□ 0.75
DNMT1-218ENST00000589294 CTTNBP2Q8WZ74 1663 aa19.69■□□□□ 0.74
DNMT1-218ENST00000589294 SHROOM2Q13796 1616 aa19.67■□□□□ 0.74
DNMT1-218ENST00000589294 PRG4Q92954 1404 aaPredicted RBP19.66■□□□□ 0.74
DNMT1-218ENST00000589294 UGGT2Q9NYU1 1516 aa19.66■□□□□ 0.74
DNMT1-218ENST00000589294 CARMIL2Q6F5E8 1435 aa19.63■□□□□ 0.73
DNMT1-218ENST00000589294 RANGAP1P46060 587 aaPredicted RBP19.59■□□□□ 0.73
DNMT1-218ENST00000589294 DISP1Q96F81 1524 aa19.58■□□□□ 0.73
DNMT1-218ENST00000589294 ARHGEF11O15085 1522 aa19.57■□□□□ 0.72
DNMT1-218ENST00000589294 ERCC6L2Q5T890 1561 aa19.53■□□□□ 0.72
DNMT1-218ENST00000589294 EFCAB5A4FU69 1503 aa19.53■□□□□ 0.72
DNMT1-218ENST00000589294 P3H3Q8IVL6 736 aa19.52■□□□□ 0.72
DNMT1-218ENST00000589294 CLIP1P30622 1438 aa19.51■□□□□ 0.71
DNMT1-218ENST00000589294 RIMBP3CA6NJZ7 1639 aa19.51■□□□□ 0.71
DNMT1-218ENST00000589294 RIMBP3BA6NNM3 1639 aa19.51■□□□□ 0.71
DNMT1-218ENST00000589294 RIMBP3Q9UFD9 1639 aa19.51■□□□□ 0.71
DNMT1-218ENST00000589294 SAMD9Q5K651 1589 aa19.51■□□□□ 0.71
DNMT1-218ENST00000589294 KIAA0556O60303 1618 aa19.51■□□□□ 0.71
DNMT1-218ENST00000589294 PTPRGP23470 1445 aa19.51■□□□□ 0.71
DNMT1-218ENST00000589294 CEP162Q5TB80 1403 aa19.5■□□□□ 0.71
DNMT1-218ENST00000589294 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
DNMT1-218ENST00000589294 CYB5RLQ6IPT4 315 aa19.46■□□□□ 0.71
DNMT1-218ENST00000589294 ARAP1Q96P48 1450 aa19.44■□□□□ 0.7
DNMT1-218ENST00000589294 TTBK1Q5TCY1 1321 aaPredicted RBP19.43■□□□□ 0.7
DNMT1-218ENST00000589294 FHOD3Q2V2M9 1422 aa19.42■□□□□ 0.7
DNMT1-218ENST00000589294 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
DNMT1-218ENST00000589294 UACAQ9BZF9 1416 aa19.36■□□□□ 0.69
DNMT1-218ENST00000589294 UHRF1BP1LA0JNW5 1464 aa19.33■□□□□ 0.68
DNMT1-218ENST00000589294 PLB1Q6P1J6 1458 aa19.31■□□□□ 0.68
DNMT1-218ENST00000589294 NPM1P06748 294 aaKnown RBP eCLIP19.3■□□□□ 0.68
DNMT1-218ENST00000589294 ABCA8O94911 1581 aa19.3■□□□□ 0.68
DNMT1-218ENST00000589294 ABCC2Q92887 1545 aa19.27■□□□□ 0.68
DNMT1-218ENST00000589294 CASKIN1Q8WXD9 1431 aa19.26■□□□□ 0.67
DNMT1-218ENST00000589294 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
DNMT1-218ENST00000589294 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
DNMT1-218ENST00000589294 RAPGEF6Q8TEU7 1601 aa19.25■□□□□ 0.67
DNMT1-218ENST00000589294 ADCY10Q96PN6 1610 aa19.24■□□□□ 0.67
DNMT1-218ENST00000589294 KDM5BQ9UGL1 1544 aa19.21■□□□□ 0.67
DNMT1-218ENST00000589294 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
DNMT1-218ENST00000589294 FYCO1Q9BQS8 1478 aa19.21■□□□□ 0.67
DNMT1-218ENST00000589294 ATP10BO94823 1461 aa19.19■□□□□ 0.66
DNMT1-218ENST00000589294 HECW1Q76N89 1606 aa19.18■□□□□ 0.66
DNMT1-218ENST00000589294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
DNMT1-218ENST00000589294 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
DNMT1-218ENST00000589294 ARID3CA6NKF2 412 aa19.16■□□□□ 0.66
DNMT1-218ENST00000589294 CDK11AQ9UQ88 783 aaPredicted RBP19.16■□□□□ 0.66
DNMT1-218ENST00000589294 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
DNMT1-218ENST00000589294 PCF11O94913 1555 aaKnown RBP19.15■□□□□ 0.66
DNMT1-218ENST00000589294 PLEKHD1A6NEE1 506 aa19.13■□□□□ 0.65
DNMT1-218ENST00000589294 CCDC18Q5T9S5 1454 aa19.13■□□□□ 0.65
DNMT1-218ENST00000589294 APLP2Q06481 763 aa19.12■□□□□ 0.65
DNMT1-218ENST00000589294 ZCCHC11Q5TAX3 1644 aaKnown RBP19.11■□□□□ 0.65
DNMT1-218ENST00000589294 MAPKBP1O60336 1514 aa19.09■□□□□ 0.65
DNMT1-218ENST00000589294 ASXL2Q76L83 1435 aa19.08■□□□□ 0.65
DNMT1-218ENST00000589294 MAP3K1Q13233 1512 aa19.07■□□□□ 0.64
DNMT1-218ENST00000589294 CDK13Q14004 1512 aaKnown RBP19.07■□□□□ 0.64
DNMT1-218ENST00000589294 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
DNMT1-218ENST00000589294 LRRIQ1Q96JM4 1722 aa19.03■□□□□ 0.64
DNMT1-218ENST00000589294 KCNH8Q96L42 1107 aa19.02■□□□□ 0.64
DNMT1-218ENST00000589294 TROQ12816 1431 aaPredicted RBP19■□□□□ 0.63
DNMT1-218ENST00000589294 TIAM1Q13009 1591 aa19■□□□□ 0.63
DNMT1-218ENST00000589294 MTUS2Q5JR59 1369 aa18.99■□□□□ 0.63
DNMT1-218ENST00000589294 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
DNMT1-218ENST00000589294 FAM69CQ0P6D2 419 aa18.97■□□□□ 0.63
DNMT1-218ENST00000589294 KANK4Q5T7N3 995 aaPredicted RBP18.97■□□□□ 0.63
DNMT1-218ENST00000589294 LRRC9Q6ZRR7 1453 aa18.96■□□□□ 0.63
DNMT1-218ENST00000589294 CFAP43Q8NDM7 1665 aa18.95■□□□□ 0.62
DNMT1-218ENST00000589294 MAGI3Q5TCQ9 1506 aa18.94■□□□□ 0.62
DNMT1-218ENST00000589294 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
DNMT1-218ENST00000589294 GLI2P10070 1586 aa18.92■□□□□ 0.62
DNMT1-218ENST00000589294 EHBP1L1Q8N3D4 1523 aa18.9■□□□□ 0.62
DNMT1-218ENST00000589294 DIP2BQ9P265 1576 aa18.89■□□□□ 0.61
DNMT1-218ENST00000589294 KIF14Q15058 1648 aa18.87■□□□□ 0.61
DNMT1-218ENST00000589294 CD109Q6YHK3 1445 aa18.86■□□□□ 0.61
DNMT1-218ENST00000589294 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.85■□□□□ 0.61
DNMT1-218ENST00000589294 ABCA9Q8IUA7 1624 aa18.85■□□□□ 0.61
DNMT1-218ENST00000589294 NCOA2Q15596 1464 aa18.83■□□□□ 0.6
DNMT1-218ENST00000589294 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
DNMT1-218ENST00000589294 KIF13AQ9H1H9 1805 aa18.82■□□□□ 0.6
DNMT1-218ENST00000589294 SUPT6HQ7KZ85 1726 aaKnown RBP18.82■□□□□ 0.6
DNMT1-218ENST00000589294 PLCH2O75038 1416 aa18.82■□□□□ 0.6
DNMT1-218ENST00000589294 PPARGC1BQ86YN6 1023 aaKnown RBP18.81■□□□□ 0.6
DNMT1-218ENST00000589294 MAP3K4Q9Y6R4 1608 aa18.79■□□□□ 0.6
DNMT1-218ENST00000589294 EFCAB2Q5VUJ9 269 aa18.79■□□□□ 0.6
DNMT1-218ENST00000589294 GPATCH8Q9UKJ3 1502 aaKnown RBP18.79■□□□□ 0.6
DNMT1-218ENST00000589294 TTC37Q6PGP7 1564 aa18.78■□□□□ 0.6
DNMT1-218ENST00000589294 CFDP1Q9UEE9 299 aaPredicted RBP18.78■□□□□ 0.6
DNMT1-218ENST00000589294 ARAP3Q8WWN8 1544 aa18.76■□□□□ 0.59
DNMT1-218ENST00000589294 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
DNMT1-218ENST00000589294 TEX14Q8IWB6 1497 aa18.75■□□□□ 0.59
DNMT1-218ENST00000589294 MYOM3Q5VTT5 1437 aa18.73■□□□□ 0.59
DNMT1-218ENST00000589294 MYO5CQ9NQX4 1742 aa18.72■□□□□ 0.59
DNMT1-218ENST00000589294 MIA2Q96PC5 1412 aa18.72■□□□□ 0.59
DNMT1-218ENST00000589294 FANCAO15360 1455 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms