RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
PTPN2-208ENST00000589216 CARMIL1Q5VZK9 1371 aa16.9■□□□□ 0.3
PTPN2-208ENST00000589216 KIAA0586Q9BVV6 1533 aa16.87■□□□□ 0.29
PTPN2-208ENST00000589216 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
PTPN2-208ENST00000589216 IQGAP2Q13576 1575 aa16.83■□□□□ 0.28
PTPN2-208ENST00000589216 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
PTPN2-208ENST00000589216 CTTNBP2Q8WZ74 1663 aa16.81■□□□□ 0.28
PTPN2-208ENST00000589216 JPH4Q96JJ6 628 aa16.79■□□□□ 0.28
PTPN2-208ENST00000589216 PRXQ9BXM0 1461 aa16.79■□□□□ 0.28
PTPN2-208ENST00000589216 ADCY10Q96PN6 1610 aa16.73■□□□□ 0.27
PTPN2-208ENST00000589216 DISP1Q96F81 1524 aa16.72■□□□□ 0.27
PTPN2-208ENST00000589216 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.27
PTPN2-208ENST00000589216 KIAA0556O60303 1618 aa16.7■□□□□ 0.26
PTPN2-208ENST00000589216 EEA1Q15075 1411 aa16.68■□□□□ 0.26
PTPN2-208ENST00000589216 SENP3Q9H4L4 574 aaPredicted RBP16.64■□□□□ 0.25
PTPN2-208ENST00000589216 KIF21BO75037 1637 aa16.63■□□□□ 0.25
PTPN2-208ENST00000589216 CARMIL2Q6F5E8 1435 aa16.63■□□□□ 0.25
PTPN2-208ENST00000589216 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
PTPN2-208ENST00000589216 KIF13AQ9H1H9 1805 aa16.62■□□□□ 0.25
PTPN2-208ENST00000589216 FAM9AQ8IZU1 332 aaPredicted RBP16.61■□□□□ 0.25
PTPN2-208ENST00000589216 TNIKQ9UKE5 1360 aa16.61■□□□□ 0.25
PTPN2-208ENST00000589216 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
PTPN2-208ENST00000589216 PTPRGP23470 1445 aa16.6■□□□□ 0.25
PTPN2-208ENST00000589216 SAMD9Q5K651 1589 aa16.57■□□□□ 0.24
PTPN2-208ENST00000589216 MAPKBP1O60336 1514 aa16.57■□□□□ 0.24
PTPN2-208ENST00000589216 TTBK1Q5TCY1 1321 aaPredicted RBP16.57■□□□□ 0.24
PTPN2-208ENST00000589216 ABCC2Q92887 1545 aa16.56■□□□□ 0.24
PTPN2-208ENST00000589216 DIP2BQ9P265 1576 aa16.54■□□□□ 0.24
PTPN2-208ENST00000589216 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
PTPN2-208ENST00000589216 UHRF1BP1LA0JNW5 1464 aa16.53■□□□□ 0.24
PTPN2-208ENST00000589216 UACAQ9BZF9 1416 aa16.52■□□□□ 0.23
PTPN2-208ENST00000589216 PLB1Q6P1J6 1458 aa16.51■□□□□ 0.23
PTPN2-208ENST00000589216 ZCCHC11Q5TAX3 1644 aaKnown RBP16.51■□□□□ 0.23
PTPN2-208ENST00000589216 ABCA8O94911 1581 aa16.51■□□□□ 0.23
PTPN2-208ENST00000589216 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
PTPN2-208ENST00000589216 KDM5BQ9UGL1 1544 aa16.47■□□□□ 0.23
PTPN2-208ENST00000589216 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
PTPN2-208ENST00000589216 ASXL2Q76L83 1435 aa16.43■□□□□ 0.22
PTPN2-208ENST00000589216 NPM1P06748 294 aaKnown RBP eCLIP16.42■□□□□ 0.22
PTPN2-208ENST00000589216 FHOD3Q2V2M9 1422 aa16.42■□□□□ 0.22
PTPN2-208ENST00000589216 EFCAB5A4FU69 1503 aa16.41■□□□□ 0.22
PTPN2-208ENST00000589216 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
PTPN2-208ENST00000589216 TSPOAP1O95153 1857 aa16.4■□□□□ 0.22
PTPN2-208ENST00000589216 RAPGEF6Q8TEU7 1601 aa16.4■□□□□ 0.22
PTPN2-208ENST00000589216 RANGAP1P46060 587 aaPredicted RBP16.39■□□□□ 0.21
PTPN2-208ENST00000589216 PPRC1Q5VV67 1664 aaKnown RBP16.39■□□□□ 0.21
PTPN2-208ENST00000589216 GLI2P10070 1586 aa16.36■□□□□ 0.21
PTPN2-208ENST00000589216 FAM69CQ0P6D2 419 aa16.36■□□□□ 0.21
PTPN2-208ENST00000589216 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
PTPN2-208ENST00000589216 PHF23Q9BUL5 403 aaPredicted RBP16.35■□□□□ 0.21
PTPN2-208ENST00000589216 WDR7Q9Y4E6 1490 aa16.35■□□□□ 0.21
PTPN2-208ENST00000589216 MAP3K4Q9Y6R4 1608 aa16.34■□□□□ 0.21
PTPN2-208ENST00000589216 NUP153P49790 1475 aaKnown RBP16.33■□□□□ 0.2
PTPN2-208ENST00000589216 ARHGAP35Q9NRY4 1499 aa16.33■□□□□ 0.2
PTPN2-208ENST00000589216 ATP10BO94823 1461 aa16.31■□□□□ 0.2
PTPN2-208ENST00000589216 UBTFP17480 764 aaKnown RBP16.31■□□□□ 0.2
PTPN2-208ENST00000589216 ARID3CA6NKF2 412 aa16.3■□□□□ 0.2
PTPN2-208ENST00000589216 CFAP43Q8NDM7 1665 aa16.27■□□□□ 0.19
PTPN2-208ENST00000589216 KDM6BO15054 1643 aa16.27■□□□□ 0.19
PTPN2-208ENST00000589216 LRRIQ1Q96JM4 1722 aa16.26■□□□□ 0.19
PTPN2-208ENST00000589216 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
PTPN2-208ENST00000589216 HECW1Q76N89 1606 aa16.23■□□□□ 0.19
PTPN2-208ENST00000589216 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
PTPN2-208ENST00000589216 ABCA9Q8IUA7 1624 aa16.21■□□□□ 0.19
PTPN2-208ENST00000589216 FMN1Q68DA7 1419 aa16.19■□□□□ 0.18
PTPN2-208ENST00000589216 COL17A1Q9UMD9 1497 aaPredicted RBP16.16■□□□□ 0.18
PTPN2-208ENST00000589216 MAGI3Q5TCQ9 1506 aa16.16■□□□□ 0.18
PTPN2-208ENST00000589216 CLIP1P30622 1438 aa16.16■□□□□ 0.18
PTPN2-208ENST00000589216 TTC37Q6PGP7 1564 aa16.16■□□□□ 0.18
PTPN2-208ENST00000589216 TEX14Q8IWB6 1497 aa16.16■□□□□ 0.18
PTPN2-208ENST00000589216 KCNH8Q96L42 1107 aa16.15■□□□□ 0.18
PTPN2-208ENST00000589216 CD109Q6YHK3 1445 aa16.14■□□□□ 0.17
PTPN2-208ENST00000589216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.11■□□□□ 0.17
PTPN2-208ENST00000589216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
PTPN2-208ENST00000589216 HNRNPUL2Q1KMD3 747 aaKnown RBP16.11■□□□□ 0.17
PTPN2-208ENST00000589216 KIF14Q15058 1648 aa16.11■□□□□ 0.17
PTPN2-208ENST00000589216 CEP162Q5TB80 1403 aa16.09■□□□□ 0.17
PTPN2-208ENST00000589216 CASKIN1Q8WXD9 1431 aa16.09■□□□□ 0.17
PTPN2-208ENST00000589216 FYCO1Q9BQS8 1478 aa16.09■□□□□ 0.17
PTPN2-208ENST00000589216 FRMPD1Q5SYB0 1578 aa16.05■□□□□ 0.16
PTPN2-208ENST00000589216 ATP1B4Q9UN42 357 aaPredicted RBP16.05■□□□□ 0.16
PTPN2-208ENST00000589216 MYO5CQ9NQX4 1742 aa16.04■□□□□ 0.16
PTPN2-208ENST00000589216 CCDC18Q5T9S5 1454 aa16.03■□□□□ 0.16
PTPN2-208ENST00000589216 PLEKHD1A6NEE1 506 aa16.02■□□□□ 0.16
PTPN2-208ENST00000589216 ARAP3Q8WWN8 1544 aa16.02■□□□□ 0.15
PTPN2-208ENST00000589216 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.15
PTPN2-208ENST00000589216 CFAP74Q9C0B2 1584 aa16.01■□□□□ 0.15
PTPN2-208ENST00000589216 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
PTPN2-208ENST00000589216 NEO1Q92859 1461 aa16.01■□□□□ 0.15
PTPN2-208ENST00000589216 RICTORQ6R327 1708 aa15.99■□□□□ 0.15
PTPN2-208ENST00000589216 FANCAO15360 1455 aa15.98■□□□□ 0.15
PTPN2-208ENST00000589216 PREX2Q70Z35 1606 aa15.96■□□□□ 0.15
PTPN2-208ENST00000589216 CDC42BPBQ9Y5S2 1711 aa15.96■□□□□ 0.15
PTPN2-208ENST00000589216 CDC42BPAQ5VT25 1732 aa15.95■□□□□ 0.14
PTPN2-208ENST00000589216 PLCH2O75038 1416 aa15.94■□□□□ 0.14
PTPN2-208ENST00000589216 AKNAQ7Z591 1439 aa15.92■□□□□ 0.14
PTPN2-208ENST00000589216 PHLDB1Q86UU1 1377 aa15.91■□□□□ 0.14
PTPN2-208ENST00000589216 ARHGEF40Q8TER5 1519 aa15.91■□□□□ 0.14
PTPN2-208ENST00000589216 ARHGAP5Q13017 1502 aa15.9■□□□□ 0.14
PTPN2-208ENST00000589216 CDK11AQ9UQ88 783 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms