RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 KIAA0586Q9BVV6 1533 aa32.78■■■□□ 2.84
DNMT1-216ENST00000588952 CTTNBP2Q8WZ74 1663 aa32.78■■■□□ 2.84
DNMT1-216ENST00000588952 LOC105371045A0A1W2PR82 267 aa32.74■■■□□ 2.83
DNMT1-216ENST00000588952 IQGAP2Q13576 1575 aa32.71■■■□□ 2.83
DNMT1-216ENST00000588952 UBTFP17480 764 aaKnown RBP32.71■■■□□ 2.83
DNMT1-216ENST00000588952 SHROOM2Q13796 1616 aa32.66■■■□□ 2.82
DNMT1-216ENST00000588952 JPH4Q96JJ6 628 aa32.59■■■□□ 2.81
DNMT1-216ENST00000588952 TNIKQ9UKE5 1360 aa32.58■■■□□ 2.81
DNMT1-216ENST00000588952 UGGT2Q9NYU1 1516 aa32.56■■■□□ 2.8
DNMT1-216ENST00000588952 ERCC6L2Q5T890 1561 aa32.53■■■□□ 2.8
DNMT1-216ENST00000588952 PRG4Q92954 1404 aaPredicted RBP32.51■■■□□ 2.79
DNMT1-216ENST00000588952 RANGAP1P46060 587 aaPredicted RBP32.48■■■□□ 2.79
DNMT1-216ENST00000588952 DISP1Q96F81 1524 aa32.47■■■□□ 2.79
DNMT1-216ENST00000588952 ARHGEF11O15085 1522 aa32.45■■■□□ 2.78
DNMT1-216ENST00000588952 SAMD9Q5K651 1589 aa32.43■■■□□ 2.78
DNMT1-216ENST00000588952 KIAA0556O60303 1618 aa32.41■■■□□ 2.78
DNMT1-216ENST00000588952 DNAJC5Q9H3Z4 198 aa32.41■■■□□ 2.78
DNMT1-216ENST00000588952 RIMBP3CA6NJZ7 1639 aa32.4■■■□□ 2.78
DNMT1-216ENST00000588952 RIMBP3BA6NNM3 1639 aa32.4■■■□□ 2.78
DNMT1-216ENST00000588952 RIMBP3Q9UFD9 1639 aa32.4■■■□□ 2.78
DNMT1-216ENST00000588952 ARHGAP35Q9NRY4 1499 aa32.35■■■□□ 2.77
DNMT1-216ENST00000588952 CEP162Q5TB80 1403 aa32.35■■■□□ 2.77
DNMT1-216ENST00000588952 CARMIL2Q6F5E8 1435 aa32.35■■■□□ 2.77
DNMT1-216ENST00000588952 EFCAB5A4FU69 1503 aa32.34■■■□□ 2.77
DNMT1-216ENST00000588952 CLIP1P30622 1438 aa32.33■■■□□ 2.77
DNMT1-216ENST00000588952 P3H3Q8IVL6 736 aa32.32■■■□□ 2.76
DNMT1-216ENST00000588952 FHOD3Q2V2M9 1422 aa32.28■■■□□ 2.76
DNMT1-216ENST00000588952 ARAP1Q96P48 1450 aa32.26■■■□□ 2.75
DNMT1-216ENST00000588952 TTBK1Q5TCY1 1321 aaPredicted RBP32.19■■■□□ 2.74
DNMT1-216ENST00000588952 PTPRGP23470 1445 aa32.17■■■□□ 2.74
DNMT1-216ENST00000588952 CYB5RLQ6IPT4 315 aa32.07■■■□□ 2.72
DNMT1-216ENST00000588952 PLB1Q6P1J6 1458 aa32.05■■■□□ 2.72
DNMT1-216ENST00000588952 ABCA8O94911 1581 aa32.03■■■□□ 2.72
DNMT1-216ENST00000588952 FMN1Q68DA7 1419 aa32■■■□□ 2.71
DNMT1-216ENST00000588952 UACAQ9BZF9 1416 aa32■■■□□ 2.71
DNMT1-216ENST00000588952 ADCY10Q96PN6 1610 aa31.98■■■□□ 2.71
DNMT1-216ENST00000588952 RAPGEF6Q8TEU7 1601 aa31.97■■■□□ 2.71
DNMT1-216ENST00000588952 ABCC2Q92887 1545 aa31.95■■■□□ 2.7
DNMT1-216ENST00000588952 PCF11O94913 1555 aaKnown RBP31.94■■■□□ 2.7
DNMT1-216ENST00000588952 UHRF1BP1LA0JNW5 1464 aa31.93■■■□□ 2.7
DNMT1-216ENST00000588952 VPS8Q8N3P4 1428 aa31.9■■■□□ 2.7
DNMT1-216ENST00000588952 CASKIN1Q8WXD9 1431 aa31.88■■■□□ 2.69
DNMT1-216ENST00000588952 NUP153P49790 1475 aaKnown RBP31.88■■■□□ 2.69
DNMT1-216ENST00000588952 FYCO1Q9BQS8 1478 aa31.84■■■□□ 2.69
DNMT1-216ENST00000588952 HECW1Q76N89 1606 aa31.82■■■□□ 2.69
DNMT1-216ENST00000588952 LRRIQ1Q96JM4 1722 aa31.8■■■□□ 2.68
DNMT1-216ENST00000588952 ARID3CA6NKF2 412 aa31.8■■■□□ 2.68
DNMT1-216ENST00000588952 KDM5BQ9UGL1 1544 aa31.79■■■□□ 2.68
DNMT1-216ENST00000588952 ATP1B4Q9UN42 357 aaPredicted RBP31.78■■■□□ 2.68
DNMT1-216ENST00000588952 ZCCHC11Q5TAX3 1644 aaKnown RBP31.76■■■□□ 2.67
DNMT1-216ENST00000588952 ATP10BO94823 1461 aa31.76■■■□□ 2.67
DNMT1-216ENST00000588952 CDK13Q14004 1512 aaKnown RBP31.75■■■□□ 2.67
DNMT1-216ENST00000588952 EPRSP07814 1512 aaKnown RBP31.74■■■□□ 2.67
DNMT1-216ENST00000588952 CCDC18Q5T9S5 1454 aa31.65■■■□□ 2.66
DNMT1-216ENST00000588952 NPM1P06748 294 aaKnown RBP eCLIP31.63■■■□□ 2.65
DNMT1-216ENST00000588952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.59■■■□□ 2.65
DNMT1-216ENST00000588952 HNRNPUL2Q1KMD3 747 aaKnown RBP31.59■■■□□ 2.65
DNMT1-216ENST00000588952 CFAP43Q8NDM7 1665 aa31.59■■■□□ 2.65
DNMT1-216ENST00000588952 MAPKBP1O60336 1514 aa31.59■■■□□ 2.65
DNMT1-216ENST00000588952 ASXL2Q76L83 1435 aa31.58■■■□□ 2.65
DNMT1-216ENST00000588952 TIAM1Q13009 1591 aa31.56■■■□□ 2.64
DNMT1-216ENST00000588952 MAGI3Q5TCQ9 1506 aa31.55■■■□□ 2.64
DNMT1-216ENST00000588952 MAP3K1Q13233 1512 aa31.51■■■□□ 2.63
DNMT1-216ENST00000588952 WDR7Q9Y4E6 1490 aa31.51■■■□□ 2.63
DNMT1-216ENST00000588952 PLEKHD1A6NEE1 506 aa31.45■■■□□ 2.63
DNMT1-216ENST00000588952 TROQ12816 1431 aaPredicted RBP31.44■■■□□ 2.62
DNMT1-216ENST00000588952 KANK4Q5T7N3 995 aaPredicted RBP31.43■■■□□ 2.62
DNMT1-216ENST00000588952 CDK11AQ9UQ88 783 aaPredicted RBP31.42■■■□□ 2.62
DNMT1-216ENST00000588952 LRRC9Q6ZRR7 1453 aa31.41■■■□□ 2.62
DNMT1-216ENST00000588952 APLP2Q06481 763 aa31.41■■■□□ 2.62
DNMT1-216ENST00000588952 EHBP1L1Q8N3D4 1523 aa31.39■■■□□ 2.61
DNMT1-216ENST00000588952 MTUS2Q5JR59 1369 aa31.38■■■□□ 2.61
DNMT1-216ENST00000588952 DIP2BQ9P265 1576 aa31.38■■■□□ 2.61
DNMT1-216ENST00000588952 KIF14Q15058 1648 aa31.38■■■□□ 2.61
DNMT1-216ENST00000588952 KCNH8Q96L42 1107 aa31.37■■■□□ 2.61
DNMT1-216ENST00000588952 ABCC10Q5T3U5 1492 aa31.37■■■□□ 2.61
DNMT1-216ENST00000588952 KIF13AQ9H1H9 1805 aa31.3■■■□□ 2.6
DNMT1-216ENST00000588952 GLI2P10070 1586 aa31.29■■■□□ 2.6
DNMT1-216ENST00000588952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.29■■■□□ 2.62e-6■□□□□ 8.3
DNMT1-216ENST00000588952 PPARGC1BQ86YN6 1023 aaKnown RBP31.28■■■□□ 2.6
DNMT1-216ENST00000588952 TTC37Q6PGP7 1564 aa31.27■■■□□ 2.6
DNMT1-216ENST00000588952 FAM69CQ0P6D2 419 aa31.26■■■□□ 2.59
DNMT1-216ENST00000588952 ABCA9Q8IUA7 1624 aa31.25■■■□□ 2.59
DNMT1-216ENST00000588952 SUPT6HQ7KZ85 1726 aaKnown RBP31.24■■■□□ 2.59
DNMT1-216ENST00000588952 NCOA2Q15596 1464 aa31.22■■■□□ 2.59
DNMT1-216ENST00000588952 MAP3K4Q9Y6R4 1608 aa31.2■■■□□ 2.58
DNMT1-216ENST00000588952 TRHP20396 242 aaPredicted RBP31.16■■■□□ 2.58
DNMT1-216ENST00000588952 CD109Q6YHK3 1445 aa31.13■■■□□ 2.57
DNMT1-216ENST00000588952 CDC42BPAQ5VT25 1732 aa31.12■■■□□ 2.57
DNMT1-216ENST00000588952 GPATCH8Q9UKJ3 1502 aaKnown RBP31.1■■■□□ 2.57
DNMT1-216ENST00000588952 MYO5CQ9NQX4 1742 aa31.1■■■□□ 2.57
DNMT1-216ENST00000588952 PPRC1Q5VV67 1664 aaKnown RBP31.09■■■□□ 2.57
DNMT1-216ENST00000588952 PHLDB1Q86UU1 1377 aa31.09■■■□□ 2.57
DNMT1-216ENST00000588952 CCNB3Q8WWL7 1395 aa31.08■■■□□ 2.57
DNMT1-216ENST00000588952 PREX2Q70Z35 1606 aa31.08■■■□□ 2.57
DNMT1-216ENST00000588952 TSPOAP1O95153 1857 aa31.07■■■□□ 2.56
DNMT1-216ENST00000588952 PLCH2O75038 1416 aa31.07■■■□□ 2.56
DNMT1-216ENST00000588952 CDC42BPBQ9Y5S2 1711 aa31.06■■■□□ 2.56
DNMT1-216ENST00000588952 ITSN2Q9NZM3 1697 aa31.02■■■□□ 2.56
DNMT1-216ENST00000588952 ARAP3Q8WWN8 1544 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms