RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 JPH4Q96JJ6 628 aa23.89■■□□□ 1.41
CNN1-208ENST00000588935 KIF21BO75037 1637 aa23.88■■□□□ 1.41
CNN1-208ENST00000588935 KIAA0586Q9BVV6 1533 aa23.88■■□□□ 1.41
CNN1-208ENST00000588935 RANGAP1P46060 587 aaPredicted RBP23.87■■□□□ 1.41
CNN1-208ENST00000588935 GOLGA3Q08378 1498 aa23.82■■□□□ 1.4
CNN1-208ENST00000588935 CTTNBP2Q8WZ74 1663 aa23.81■■□□□ 1.4
CNN1-208ENST00000588935 LOC105371045A0A1W2PR82 267 aa23.8■■□□□ 1.4
CNN1-208ENST00000588935 IQGAP2Q13576 1575 aa23.8■■□□□ 1.4
CNN1-208ENST00000588935 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
CNN1-208ENST00000588935 ARHGEF11O15085 1522 aa23.78■■□□□ 1.4
CNN1-208ENST00000588935 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
CNN1-208ENST00000588935 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
CNN1-208ENST00000588935 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
CNN1-208ENST00000588935 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
CNN1-208ENST00000588935 TTBK1Q5TCY1 1321 aaPredicted RBP23.76■■□□□ 1.39
CNN1-208ENST00000588935 SHROOM2Q13796 1616 aa23.75■■□□□ 1.39
CNN1-208ENST00000588935 P3H3Q8IVL6 736 aa23.71■■□□□ 1.39
CNN1-208ENST00000588935 CYB5RLQ6IPT4 315 aa23.7■■□□□ 1.38
CNN1-208ENST00000588935 CARMIL2Q6F5E8 1435 aa23.65■■□□□ 1.38
CNN1-208ENST00000588935 UGGT2Q9NYU1 1516 aa23.64■■□□□ 1.38
CNN1-208ENST00000588935 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
CNN1-208ENST00000588935 DISP1Q96F81 1524 aa23.61■■□□□ 1.37
CNN1-208ENST00000588935 TNIKQ9UKE5 1360 aa23.59■■□□□ 1.37
CNN1-208ENST00000588935 KIAA0556O60303 1618 aa23.56■■□□□ 1.36
CNN1-208ENST00000588935 PTPRGP23470 1445 aa23.55■■□□□ 1.36
CNN1-208ENST00000588935 FHOD3Q2V2M9 1422 aa23.49■■□□□ 1.35
CNN1-208ENST00000588935 SAMD9Q5K651 1589 aa23.48■■□□□ 1.35
CNN1-208ENST00000588935 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
CNN1-208ENST00000588935 CLIP1P30622 1438 aa23.44■■□□□ 1.34
CNN1-208ENST00000588935 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
CNN1-208ENST00000588935 CEP162Q5TB80 1403 aa23.41■■□□□ 1.34
CNN1-208ENST00000588935 ARID3CA6NKF2 412 aa23.38■■□□□ 1.33
CNN1-208ENST00000588935 ATP1B4Q9UN42 357 aaPredicted RBP23.37■■□□□ 1.33
CNN1-208ENST00000588935 PLB1Q6P1J6 1458 aa23.36■■□□□ 1.33
CNN1-208ENST00000588935 UACAQ9BZF9 1416 aa23.36■■□□□ 1.33
CNN1-208ENST00000588935 NPM1P06748 294 aaKnown RBP eCLIP23.34■■□□□ 1.33
CNN1-208ENST00000588935 ADCY10Q96PN6 1610 aa23.32■■□□□ 1.32
CNN1-208ENST00000588935 ABCA8O94911 1581 aa23.28■■□□□ 1.32
CNN1-208ENST00000588935 ABCC2Q92887 1545 aa23.27■■□□□ 1.32
CNN1-208ENST00000588935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.26■■□□□ 1.31
CNN1-208ENST00000588935 HNRNPUL2Q1KMD3 747 aaKnown RBP23.26■■□□□ 1.31
CNN1-208ENST00000588935 FMN1Q68DA7 1419 aa23.25■■□□□ 1.31
CNN1-208ENST00000588935 RAPGEF6Q8TEU7 1601 aa23.25■■□□□ 1.31
CNN1-208ENST00000588935 UHRF1BP1LA0JNW5 1464 aa23.24■■□□□ 1.31
CNN1-208ENST00000588935 TRHP20396 242 aaPredicted RBP23.16■■□□□ 1.3
CNN1-208ENST00000588935 NUP153P49790 1475 aaKnown RBP23.16■■□□□ 1.3
CNN1-208ENST00000588935 ZCCHC11Q5TAX3 1644 aaKnown RBP23.15■■□□□ 1.3
CNN1-208ENST00000588935 KDM5BQ9UGL1 1544 aa23.15■■□□□ 1.3
CNN1-208ENST00000588935 ATP10BO94823 1461 aa23.15■■□□□ 1.3
CNN1-208ENST00000588935 PCF11O94913 1555 aaKnown RBP23.14■■□□□ 1.29
CNN1-208ENST00000588935 CASKIN1Q8WXD9 1431 aa23.12■■□□□ 1.29
CNN1-208ENST00000588935 KCNH8Q96L42 1107 aa23.11■■□□□ 1.29
CNN1-208ENST00000588935 HECW1Q76N89 1606 aa23.11■■□□□ 1.29
CNN1-208ENST00000588935 CDK13Q14004 1512 aaKnown RBP23.09■■□□□ 1.29
CNN1-208ENST00000588935 ASXL2Q76L83 1435 aa23.08■■□□□ 1.29
CNN1-208ENST00000588935 VPS8Q8N3P4 1428 aa23.08■■□□□ 1.28
CNN1-208ENST00000588935 LRRIQ1Q96JM4 1722 aa23.06■■□□□ 1.28
CNN1-208ENST00000588935 EPRSP07814 1512 aaKnown RBP23.06■■□□□ 1.28
CNN1-208ENST00000588935 FYCO1Q9BQS8 1478 aa23.05■■□□□ 1.28
CNN1-208ENST00000588935 PLEKHD1A6NEE1 506 aa23.05■■□□□ 1.28
CNN1-208ENST00000588935 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
CNN1-208ENST00000588935 FAM69CQ0P6D2 419 aa23.03■■□□□ 1.28
CNN1-208ENST00000588935 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
CNN1-208ENST00000588935 WDR7Q9Y4E6 1490 aa22.98■■□□□ 1.27
CNN1-208ENST00000588935 APLP2Q06481 763 aa22.96■■□□□ 1.27
CNN1-208ENST00000588935 CCDC18Q5T9S5 1454 aa22.96■■□□□ 1.27
CNN1-208ENST00000588935 ABCC10Q5T3U5 1492 aa22.95■■□□□ 1.26
CNN1-208ENST00000588935 KIF13AQ9H1H9 1805 aa22.92■■□□□ 1.26
CNN1-208ENST00000588935 DIP2BQ9P265 1576 aa22.91■■□□□ 1.26
CNN1-208ENST00000588935 TSPOAP1O95153 1857 aa22.88■■□□□ 1.25
CNN1-208ENST00000588935 MAGI3Q5TCQ9 1506 aa22.87■■□□□ 1.25
CNN1-208ENST00000588935 MTUS2Q5JR59 1369 aa22.87■■□□□ 1.25
CNN1-208ENST00000588935 TROQ12816 1431 aaPredicted RBP22.86■■□□□ 1.25
CNN1-208ENST00000588935 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
CNN1-208ENST00000588935 TIAM1Q13009 1591 aa22.84■■□□□ 1.25
CNN1-208ENST00000588935 PPARGC1BQ86YN6 1023 aaKnown RBP22.84■■□□□ 1.25
CNN1-208ENST00000588935 CFAP43Q8NDM7 1665 aa22.82■■□□□ 1.24
CNN1-208ENST00000588935 GLI2P10070 1586 aa22.81■■□□□ 1.24
CNN1-208ENST00000588935 KIF14Q15058 1648 aa22.81■■□□□ 1.24
CNN1-208ENST00000588935 CD109Q6YHK3 1445 aa22.8■■□□□ 1.24
CNN1-208ENST00000588935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.77■■□□□ 1.24
CNN1-208ENST00000588935 MAP3K4Q9Y6R4 1608 aa22.75■■□□□ 1.23
CNN1-208ENST00000588935 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
CNN1-208ENST00000588935 MAP3K1Q13233 1512 aa22.75■■□□□ 1.23
CNN1-208ENST00000588935 TTC37Q6PGP7 1564 aa22.75■■□□□ 1.23
CNN1-208ENST00000588935 ABCA9Q8IUA7 1624 aa22.75■■□□□ 1.23
CNN1-208ENST00000588935 EHBP1L1Q8N3D4 1523 aa22.73■■□□□ 1.23
CNN1-208ENST00000588935 PPRC1Q5VV67 1664 aaKnown RBP22.68■■□□□ 1.22
CNN1-208ENST00000588935 SUPT6HQ7KZ85 1726 aaKnown RBP22.68■■□□□ 1.22
CNN1-208ENST00000588935 CCNB3Q8WWL7 1395 aa22.67■■□□□ 1.22
CNN1-208ENST00000588935 ZNF777Q9ULD5 760 aaPredicted RBP22.67■■□□□ 1.22
CNN1-208ENST00000588935 NCOA2Q15596 1464 aa22.66■■□□□ 1.22
CNN1-208ENST00000588935 MYO5CQ9NQX4 1742 aa22.65■■□□□ 1.22
CNN1-208ENST00000588935 PLCH2O75038 1416 aa22.65■■□□□ 1.22
CNN1-208ENST00000588935 TEX14Q8IWB6 1497 aa22.63■■□□□ 1.21
CNN1-208ENST00000588935 EFCAB2Q5VUJ9 269 aa22.63■■□□□ 1.21
CNN1-208ENST00000588935 CFDP1Q9UEE9 299 aaPredicted RBP22.62■■□□□ 1.21
CNN1-208ENST00000588935 CDC42BPAQ5VT25 1732 aa22.62■■□□□ 1.21
CNN1-208ENST00000588935 ARHGAP5Q13017 1502 aa22.62■■□□□ 1.21
CNN1-208ENST00000588935 GPATCH8Q9UKJ3 1502 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms