RNA–Protein interactions for RNA: ENST00000588841.1

C19orf53-203, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 2

Gene C19orf53, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-203ENST00000588841 ARHGEF11O15085 1522 aa13.89□□□□□ -0.19
C19orf53-203ENST00000588841 SHROOM2Q13796 1616 aa13.88□□□□□ -0.19
C19orf53-203ENST00000588841 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
C19orf53-203ENST00000588841 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
C19orf53-203ENST00000588841 KIF21BO75037 1637 aa13.86□□□□□ -0.19
C19orf53-203ENST00000588841 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
C19orf53-203ENST00000588841 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
C19orf53-203ENST00000588841 IQGAP2Q13576 1575 aa13.83□□□□□ -0.2
C19orf53-203ENST00000588841 PRG4Q92954 1404 aaPredicted RBP13.82□□□□□ -0.2
C19orf53-203ENST00000588841 ARAP1Q96P48 1450 aa13.8□□□□□ -0.2
C19orf53-203ENST00000588841 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
C19orf53-203ENST00000588841 GOLGA3Q08378 1498 aa13.79□□□□□ -0.2
C19orf53-203ENST00000588841 UGGT2Q9NYU1 1516 aa13.79□□□□□ -0.2
C19orf53-203ENST00000588841 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
C19orf53-203ENST00000588841 DISP1Q96F81 1524 aa13.78□□□□□ -0.2
C19orf53-203ENST00000588841 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.21
C19orf53-203ENST00000588841 UBTFP17480 764 aaKnown RBP13.74□□□□□ -0.21
C19orf53-203ENST00000588841 CARMIL2Q6F5E8 1435 aa13.72□□□□□ -0.21
C19orf53-203ENST00000588841 KIAA0556O60303 1618 aa13.71□□□□□ -0.22
C19orf53-203ENST00000588841 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.22
C19orf53-203ENST00000588841 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
C19orf53-203ENST00000588841 PTPRGP23470 1445 aa13.68□□□□□ -0.22
C19orf53-203ENST00000588841 SAMD9Q5K651 1589 aa13.67□□□□□ -0.22
C19orf53-203ENST00000588841 RANGAP1P46060 587 aaPredicted RBP13.67□□□□□ -0.22
C19orf53-203ENST00000588841 P3H3Q8IVL6 736 aa13.66□□□□□ -0.22
C19orf53-203ENST00000588841 TTBK1Q5TCY1 1321 aaPredicted RBP13.64□□□□□ -0.23
C19orf53-203ENST00000588841 ARHGAP35Q9NRY4 1499 aa13.62□□□□□ -0.23
C19orf53-203ENST00000588841 EFCAB5A4FU69 1503 aa13.61□□□□□ -0.23
C19orf53-203ENST00000588841 FHOD3Q2V2M9 1422 aa13.61□□□□□ -0.23
C19orf53-203ENST00000588841 ADCY10Q96PN6 1610 aa13.6□□□□□ -0.23
C19orf53-203ENST00000588841 UACAQ9BZF9 1416 aa13.59□□□□□ -0.23
C19orf53-203ENST00000588841 PLB1Q6P1J6 1458 aa13.59□□□□□ -0.23
C19orf53-203ENST00000588841 UHRF1BP1LA0JNW5 1464 aa13.58□□□□□ -0.24
C19orf53-203ENST00000588841 ABCA8O94911 1581 aa13.57□□□□□ -0.24
C19orf53-203ENST00000588841 CLIP1P30622 1438 aa13.56□□□□□ -0.24
C19orf53-203ENST00000588841 ABCC2Q92887 1545 aa13.55□□□□□ -0.24
C19orf53-203ENST00000588841 CEP162Q5TB80 1403 aa13.54□□□□□ -0.24
C19orf53-203ENST00000588841 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.25
C19orf53-203ENST00000588841 NPM1P06748 294 aaKnown RBP eCLIP13.5□□□□□ -0.25
C19orf53-203ENST00000588841 RAPGEF6Q8TEU7 1601 aa13.5□□□□□ -0.25
C19orf53-203ENST00000588841 FMN1Q68DA7 1419 aa13.49□□□□□ -0.25
C19orf53-203ENST00000588841 ATP10BO94823 1461 aa13.48□□□□□ -0.25
C19orf53-203ENST00000588841 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
C19orf53-203ENST00000588841 MAPKBP1O60336 1514 aa13.47□□□□□ -0.25
C19orf53-203ENST00000588841 ZCCHC11Q5TAX3 1644 aaKnown RBP13.46□□□□□ -0.25
C19orf53-203ENST00000588841 ARID3CA6NKF2 412 aa13.45□□□□□ -0.26
C19orf53-203ENST00000588841 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
C19orf53-203ENST00000588841 ASXL2Q76L83 1435 aa13.44□□□□□ -0.26
C19orf53-203ENST00000588841 CASKIN1Q8WXD9 1431 aa13.43□□□□□ -0.26
C19orf53-203ENST00000588841 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
C19orf53-203ENST00000588841 ABCC10Q5T3U5 1492 aa13.41□□□□□ -0.26
C19orf53-203ENST00000588841 EPRSP07814 1512 aaKnown RBP13.4□□□□□ -0.26
C19orf53-203ENST00000588841 CDK13Q14004 1512 aaKnown RBP13.39□□□□□ -0.27
C19orf53-203ENST00000588841 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
C19orf53-203ENST00000588841 ATP1B4Q9UN42 357 aaPredicted RBP13.39□□□□□ -0.27
C19orf53-203ENST00000588841 FYCO1Q9BQS8 1478 aa13.38□□□□□ -0.27
C19orf53-203ENST00000588841 WDR7Q9Y4E6 1490 aa13.38□□□□□ -0.27
C19orf53-203ENST00000588841 LRRIQ1Q96JM4 1722 aa13.38□□□□□ -0.27
C19orf53-203ENST00000588841 DIP2BQ9P265 1576 aa13.37□□□□□ -0.27
C19orf53-203ENST00000588841 FAM69CQ0P6D2 419 aa13.37□□□□□ -0.27
C19orf53-203ENST00000588841 VPS8Q8N3P4 1428 aa13.37□□□□□ -0.27
C19orf53-203ENST00000588841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
C19orf53-203ENST00000588841 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
C19orf53-203ENST00000588841 KIF13AQ9H1H9 1805 aa13.34□□□□□ -0.27
C19orf53-203ENST00000588841 GLI2P10070 1586 aa13.34□□□□□ -0.27
C19orf53-203ENST00000588841 PLEKHD1A6NEE1 506 aa13.34□□□□□ -0.27
C19orf53-203ENST00000588841 KCNH8Q96L42 1107 aa13.34□□□□□ -0.27
C19orf53-203ENST00000588841 CCDC18Q5T9S5 1454 aa13.32□□□□□ -0.28
C19orf53-203ENST00000588841 MAGI3Q5TCQ9 1506 aa13.31□□□□□ -0.28
C19orf53-203ENST00000588841 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
C19orf53-203ENST00000588841 TROQ12816 1431 aaPredicted RBP13.29□□□□□ -0.28
C19orf53-203ENST00000588841 MAP3K4Q9Y6R4 1608 aa13.28□□□□□ -0.28
C19orf53-203ENST00000588841 ABCA9Q8IUA7 1624 aa13.26□□□□□ -0.29
C19orf53-203ENST00000588841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.26□□□□□ -0.29
C19orf53-203ENST00000588841 CD109Q6YHK3 1445 aa13.25□□□□□ -0.29
C19orf53-203ENST00000588841 PPRC1Q5VV67 1664 aaKnown RBP13.24□□□□□ -0.29
C19orf53-203ENST00000588841 KIF14Q15058 1648 aa13.24□□□□□ -0.29
C19orf53-203ENST00000588841 TIAM1Q13009 1591 aa13.24□□□□□ -0.29
C19orf53-203ENST00000588841 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
C19orf53-203ENST00000588841 KANK4Q5T7N3 995 aaPredicted RBP13.23□□□□□ -0.29
C19orf53-203ENST00000588841 CFAP43Q8NDM7 1665 aa13.23□□□□□ -0.29
C19orf53-203ENST00000588841 TTC37Q6PGP7 1564 aa13.22□□□□□ -0.29
C19orf53-203ENST00000588841 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
C19orf53-203ENST00000588841 LRRC9Q6ZRR7 1453 aa13.2□□□□□ -0.3
C19orf53-203ENST00000588841 TSPOAP1O95153 1857 aa13.2□□□□□ -0.3
C19orf53-203ENST00000588841 PLCH2O75038 1416 aa13.19□□□□□ -0.3
C19orf53-203ENST00000588841 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
C19orf53-203ENST00000588841 TEX14Q8IWB6 1497 aa13.17□□□□□ -0.3
C19orf53-203ENST00000588841 COL17A1Q9UMD9 1497 aaPredicted RBP13.16□□□□□ -0.3
C19orf53-203ENST00000588841 GPATCH8Q9UKJ3 1502 aaKnown RBP13.15□□□□□ -0.3
C19orf53-203ENST00000588841 APLP2Q06481 763 aa13.14□□□□□ -0.31
C19orf53-203ENST00000588841 ARAP3Q8WWN8 1544 aa13.13□□□□□ -0.31
C19orf53-203ENST00000588841 FANCAO15360 1455 aa13.13□□□□□ -0.31
C19orf53-203ENST00000588841 NCOA2Q15596 1464 aa13.13□□□□□ -0.31
C19orf53-203ENST00000588841 NEO1Q92859 1461 aa13.13□□□□□ -0.31
C19orf53-203ENST00000588841 AKNAQ7Z591 1439 aa13.12□□□□□ -0.31
C19orf53-203ENST00000588841 MYO5CQ9NQX4 1742 aa13.11□□□□□ -0.31
C19orf53-203ENST00000588841 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
C19orf53-203ENST00000588841 PHLDB1Q86UU1 1377 aa13.11□□□□□ -0.31
C19orf53-203ENST00000588841 CCNB3Q8WWL7 1395 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms