RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 JPH4Q96JJ6 628 aa33.12■■■□□ 2.89
CCDC130-209ENST00000588809 KIAA0586Q9BVV6 1533 aa33.12■■■□□ 2.89
CCDC130-209ENST00000588809 CARMIL1Q5VZK9 1371 aa33.09■■■□□ 2.89
CCDC130-209ENST00000588809 TRHP20396 242 aaPredicted RBP33.04■■■□□ 2.88
CCDC130-209ENST00000588809 IQGAP2Q13576 1575 aa32.91■■■□□ 2.86
CCDC130-209ENST00000588809 RAPGEF2Q9Y4G8 1499 aa32.88■■■□□ 2.85
CCDC130-209ENST00000588809 ADCY10Q96PN6 1610 aa32.83■■■□□ 2.85
CCDC130-209ENST00000588809 KIF13AQ9H1H9 1805 aa32.79■■■□□ 2.84
CCDC130-209ENST00000588809 CTTNBP2Q8WZ74 1663 aa32.77■■■□□ 2.84
CCDC130-209ENST00000588809 CARMIL2Q6F5E8 1435 aa32.73■■■□□ 2.83
CCDC130-209ENST00000588809 UGGT2Q9NYU1 1516 aa32.72■■■□□ 2.83
CCDC130-209ENST00000588809 MAPKBP1O60336 1514 aa32.71■■■□□ 2.83
CCDC130-209ENST00000588809 DISP1Q96F81 1524 aa32.69■■■□□ 2.82
CCDC130-209ENST00000588809 PRXQ9BXM0 1461 aa32.68■■■□□ 2.82
CCDC130-209ENST00000588809 TNIKQ9UKE5 1360 aa32.66■■■□□ 2.82
CCDC130-209ENST00000588809 PTPRGP23470 1445 aa32.66■■■□□ 2.82
CCDC130-209ENST00000588809 KIAA0556O60303 1618 aa32.61■■■□□ 2.81
CCDC130-209ENST00000588809 NPM1P06748 294 aaKnown RBP eCLIP32.57■■■□□ 2.8
CCDC130-209ENST00000588809 ABCC10Q5T3U5 1492 aa32.56■■■□□ 2.8
CCDC130-209ENST00000588809 DIP2BQ9P265 1576 aa32.56■■■□□ 2.8
CCDC130-209ENST00000588809 UHRF1BP1LA0JNW5 1464 aa32.53■■■□□ 2.8
CCDC130-209ENST00000588809 ABCC2Q92887 1545 aa32.51■■■□□ 2.79
CCDC130-209ENST00000588809 EEA1Q15075 1411 aa32.46■■■□□ 2.79
CCDC130-209ENST00000588809 UACAQ9BZF9 1416 aa32.46■■■□□ 2.79
CCDC130-209ENST00000588809 GOLGA3Q08378 1498 aa32.44■■■□□ 2.78
CCDC130-209ENST00000588809 TTBK1Q5TCY1 1321 aaPredicted RBP32.43■■■□□ 2.78
CCDC130-209ENST00000588809 CSRNP3Q8WYN3 585 aa32.41■■■□□ 2.78
CCDC130-209ENST00000588809 FAM69CQ0P6D2 419 aa32.38■■■□□ 2.77
CCDC130-209ENST00000588809 KDM5BQ9UGL1 1544 aa32.37■■■□□ 2.77
CCDC130-209ENST00000588809 ZCCHC11Q5TAX3 1644 aaKnown RBP32.35■■■□□ 2.77
CCDC130-209ENST00000588809 TSPOAP1O95153 1857 aa32.33■■■□□ 2.77
CCDC130-209ENST00000588809 PLB1Q6P1J6 1458 aa32.32■■■□□ 2.76
CCDC130-209ENST00000588809 ASXL2Q76L83 1435 aa32.32■■■□□ 2.76
CCDC130-209ENST00000588809 ABCA8O94911 1581 aa32.28■■■□□ 2.76
CCDC130-209ENST00000588809 GLI2P10070 1586 aa32.28■■■□□ 2.76
CCDC130-209ENST00000588809 SAMD9Q5K651 1589 aa32.27■■■□□ 2.76
CCDC130-209ENST00000588809 KIF21BO75037 1637 aa32.26■■■□□ 2.75
CCDC130-209ENST00000588809 PPRC1Q5VV67 1664 aaKnown RBP32.21■■■□□ 2.75
CCDC130-209ENST00000588809 CHIC1Q5VXU3 224 aa32.16■■■□□ 2.74
CCDC130-209ENST00000588809 EPRSP07814 1512 aaKnown RBP32.16■■■□□ 2.74
CCDC130-209ENST00000588809 MAP3K4Q9Y6R4 1608 aa32.15■■■□□ 2.74
CCDC130-209ENST00000588809 KDM6BO15054 1643 aa32.14■■■□□ 2.74
CCDC130-209ENST00000588809 WDR7Q9Y4E6 1490 aa32.1■■■□□ 2.73
CCDC130-209ENST00000588809 FAM9AQ8IZU1 332 aaPredicted RBP32.09■■■□□ 2.73
CCDC130-209ENST00000588809 RAPGEF6Q8TEU7 1601 aa32.02■■■□□ 2.72
CCDC130-209ENST00000588809 P3H3Q8IVL6 736 aa32.01■■■□□ 2.71
CCDC130-209ENST00000588809 CFAP43Q8NDM7 1665 aa32■■■□□ 2.71
CCDC130-209ENST00000588809 EFCAB5A4FU69 1503 aa31.99■■■□□ 2.71
CCDC130-209ENST00000588809 ATP10BO94823 1461 aa31.94■■■□□ 2.7
CCDC130-209ENST00000588809 TEX14Q8IWB6 1497 aa31.94■■■□□ 2.7
CCDC130-209ENST00000588809 FHOD3Q2V2M9 1422 aa31.91■■■□□ 2.7
CCDC130-209ENST00000588809 NUP153P49790 1475 aaKnown RBP31.85■■■□□ 2.69
CCDC130-209ENST00000588809 MAGI3Q5TCQ9 1506 aa31.85■■■□□ 2.69
CCDC130-209ENST00000588809 RANGAP1P46060 587 aaPredicted RBP31.81■■■□□ 2.68
CCDC130-209ENST00000588809 CD109Q6YHK3 1445 aa31.81■■■□□ 2.68
CCDC130-209ENST00000588809 COL17A1Q9UMD9 1497 aaPredicted RBP31.8■■■□□ 2.68
CCDC130-209ENST00000588809 ABCA9Q8IUA7 1624 aa31.8■■■□□ 2.68
CCDC130-209ENST00000588809 KCNH8Q96L42 1107 aa31.78■■■□□ 2.68
CCDC130-209ENST00000588809 ARID3CA6NKF2 412 aa31.76■■■□□ 2.67
CCDC130-209ENST00000588809 UBTFP17480 764 aaKnown RBP31.75■■■□□ 2.67
CCDC130-209ENST00000588809 AEBP2Q6ZN18 517 aaPredicted RBP31.73■■■□□ 2.67
CCDC130-209ENST00000588809 ARHGAP35Q9NRY4 1499 aa31.7■■■□□ 2.66
CCDC130-209ENST00000588809 EHMT2Q96KQ7 1210 aa31.66■■■□□ 2.66
CCDC130-209ENST00000588809 FMN1Q68DA7 1419 aa31.63■■■□□ 2.65
CCDC130-209ENST00000588809 HECW1Q76N89 1606 aa31.6■■■□□ 2.65
CCDC130-209ENST00000588809 ARAP3Q8WWN8 1544 aa31.6■■■□□ 2.65
CCDC130-209ENST00000588809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.6■■■□□ 2.65
CCDC130-209ENST00000588809 HNRNPUL2Q1KMD3 747 aaKnown RBP31.6■■■□□ 2.65
CCDC130-209ENST00000588809 CDK13Q14004 1512 aaKnown RBP31.56■■■□□ 2.64
CCDC130-209ENST00000588809 PHLDB1Q86UU1 1377 aa31.54■■■□□ 2.64
CCDC130-209ENST00000588809 LRRIQ1Q96JM4 1722 aa31.53■■■□□ 2.64
CCDC130-209ENST00000588809 NEO1Q92859 1461 aa31.52■■■□□ 2.64
CCDC130-209ENST00000588809 PLEKHD1A6NEE1 506 aa31.52■■■□□ 2.64
CCDC130-209ENST00000588809 KDM4FA0A1W2PPD8 638 aa31.51■■■□□ 2.63
CCDC130-209ENST00000588809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.5■■■□□ 2.63
CCDC130-209ENST00000588809 TTC37Q6PGP7 1564 aa31.49■■■□□ 2.63
CCDC130-209ENST00000588809 CFAP74Q9C0B2 1584 aa31.46■■■□□ 2.63
CCDC130-209ENST00000588809 ADGRL1O94910 1474 aa31.43■■■□□ 2.62
CCDC130-209ENST00000588809 FRMPD1Q5SYB0 1578 aa31.4■■■□□ 2.62
CCDC130-209ENST00000588809 PCF11O94913 1555 aaKnown RBP31.39■■■□□ 2.62
CCDC130-209ENST00000588809 RICTORQ6R327 1708 aa31.38■■■□□ 2.61
CCDC130-209ENST00000588809 MYO5CQ9NQX4 1742 aa31.36■■■□□ 2.61
CCDC130-209ENST00000588809 FANCAO15360 1455 aa31.34■■■□□ 2.61
CCDC130-209ENST00000588809 CASKIN1Q8WXD9 1431 aa31.34■■■□□ 2.61
CCDC130-209ENST00000588809 KIF14Q15058 1648 aa31.33■■■□□ 2.61
CCDC130-209ENST00000588809 ATP1B4Q9UN42 357 aaPredicted RBP31.31■■■□□ 2.6
CCDC130-209ENST00000588809 CDK11AQ9UQ88 783 aaPredicted RBP31.3■■■□□ 2.6
CCDC130-209ENST00000588809 CLIP1P30622 1438 aa31.3■■■□□ 2.6
CCDC130-209ENST00000588809 AKNAQ7Z591 1439 aa31.3■■■□□ 2.6
CCDC130-209ENST00000588809 CCDC18Q5T9S5 1454 aa31.29■■■□□ 2.6
CCDC130-209ENST00000588809 TROQ12816 1431 aaPredicted RBP31.29■■■□□ 2.6
CCDC130-209ENST00000588809 FYCO1Q9BQS8 1478 aa31.27■■■□□ 2.6
CCDC130-209ENST00000588809 PLCH2O75038 1416 aa31.27■■■□□ 2.6
CCDC130-209ENST00000588809 RAPGEF3O95398 923 aa31.26■■■□□ 2.59
CCDC130-209ENST00000588809 DENND4BO75064 1496 aaPredicted RBP31.25■■■□□ 2.59
CCDC130-209ENST00000588809 ZMYM4Q5VZL5 1548 aa31.22■■■□□ 2.59
CCDC130-209ENST00000588809 ARHGEF40Q8TER5 1519 aa31.21■■■□□ 2.59
CCDC130-209ENST00000588809 CDC42BPBQ9Y5S2 1711 aa31.18■■■□□ 2.58
CCDC130-209ENST00000588809 PREX2Q70Z35 1606 aa31.13■■■□□ 2.57
CCDC130-209ENST00000588809 ADAMTSL3P82987 1691 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms