RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 FBLN2P98095 1184 aa16.74■□□□□ 0.27
NEDD4L-224ENST00000588712 KIAA0586Q9BVV6 1533 aa16.71■□□□□ 0.27
NEDD4L-224ENST00000588712 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
NEDD4L-224ENST00000588712 EFCAB5A4FU69 1503 aa16.68■□□□□ 0.26
NEDD4L-224ENST00000588712 NUP160Q12769 1436 aa16.68■□□□□ 0.26
NEDD4L-224ENST00000588712 IQGAP2Q13576 1575 aa16.67■□□□□ 0.26
NEDD4L-224ENST00000588712 ARHGAP35Q9NRY4 1499 aa16.64■□□□□ 0.25
NEDD4L-224ENST00000588712 CEP170Q5SW79 1584 aa16.63■□□□□ 0.25
NEDD4L-224ENST00000588712 CHD1O14646 1710 aa16.63■□□□□ 0.25
NEDD4L-224ENST00000588712 VPS8Q8N3P4 1428 aa16.61■□□□□ 0.25
NEDD4L-224ENST00000588712 UGGT2Q9NYU1 1516 aa16.61■□□□□ 0.25
NEDD4L-224ENST00000588712 SAMD9Q5K651 1589 aa16.58■□□□□ 0.25
NEDD4L-224ENST00000588712 ARAP1Q96P48 1450 aa16.58■□□□□ 0.25
NEDD4L-224ENST00000588712 JPH4Q96JJ6 628 aa16.57■□□□□ 0.24
NEDD4L-224ENST00000588712 FMN1Q68DA7 1419 aa16.55■□□□□ 0.24
NEDD4L-224ENST00000588712 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
NEDD4L-224ENST00000588712 APLP2Q06481 763 aa16.54■□□□□ 0.24
NEDD4L-224ENST00000588712 P3H3Q8IVL6 736 aa16.52■□□□□ 0.24
NEDD4L-224ENST00000588712 FHOD3Q2V2M9 1422 aa16.5■□□□□ 0.23
NEDD4L-224ENST00000588712 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
NEDD4L-224ENST00000588712 KIAA0556O60303 1618 aa16.49■□□□□ 0.23
NEDD4L-224ENST00000588712 DISP1Q96F81 1524 aa16.49■□□□□ 0.23
NEDD4L-224ENST00000588712 CLASP1Q7Z460 1538 aa16.48■□□□□ 0.23
NEDD4L-224ENST00000588712 SHROOM2Q13796 1616 aa16.46■□□□□ 0.23
NEDD4L-224ENST00000588712 CASKIN1Q8WXD9 1431 aa16.45■□□□□ 0.22
NEDD4L-224ENST00000588712 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
NEDD4L-224ENST00000588712 FYCO1Q9BQS8 1478 aa16.44■□□□□ 0.22
NEDD4L-224ENST00000588712 MAP3K1Q13233 1512 aa16.42■□□□□ 0.22
NEDD4L-224ENST00000588712 ATP1B4Q9UN42 357 aaPredicted RBP16.38■□□□□ 0.21
NEDD4L-224ENST00000588712 PCF11O94913 1555 aaKnown RBP16.37■□□□□ 0.21
NEDD4L-224ENST00000588712 PTPRGP23470 1445 aa16.36■□□□□ 0.21
NEDD4L-224ENST00000588712 HECW1Q76N89 1606 aa16.35■□□□□ 0.21
NEDD4L-224ENST00000588712 CCDC18Q5T9S5 1454 aa16.34■□□□□ 0.21
NEDD4L-224ENST00000588712 TIAM1Q13009 1591 aa16.33■□□□□ 0.2
NEDD4L-224ENST00000588712 RAPGEF6Q8TEU7 1601 aa16.31■□□□□ 0.2
NEDD4L-224ENST00000588712 TRIM26Q12899 539 aaPredicted RBP16.3■□□□□ 0.2
NEDD4L-224ENST00000588712 TTBK1Q5TCY1 1321 aaPredicted RBP16.3■□□□□ 0.2
NEDD4L-224ENST00000588712 CFAP43Q8NDM7 1665 aa16.29■□□□□ 0.2
NEDD4L-224ENST00000588712 CDK11AQ9UQ88 783 aaPredicted RBP16.28■□□□□ 0.2
NEDD4L-224ENST00000588712 PPARGC1BQ86YN6 1023 aaKnown RBP16.28■□□□□ 0.2
NEDD4L-224ENST00000588712 EPRSP07814 1512 aaKnown RBP16.27■□□□□ 0.2
NEDD4L-224ENST00000588712 ABCA8O94911 1581 aa16.27■□□□□ 0.2
NEDD4L-224ENST00000588712 LRRC9Q6ZRR7 1453 aa16.26■□□□□ 0.19
NEDD4L-224ENST00000588712 UACAQ9BZF9 1416 aa16.26■□□□□ 0.19
NEDD4L-224ENST00000588712 PLB1Q6P1J6 1458 aa16.26■□□□□ 0.19
NEDD4L-224ENST00000588712 KANK4Q5T7N3 995 aaPredicted RBP16.25■□□□□ 0.19
NEDD4L-224ENST00000588712 ERCC6L2Q5T890 1561 aa16.25■□□□□ 0.19
NEDD4L-224ENST00000588712 NUP153P49790 1475 aaKnown RBP16.25■□□□□ 0.19
NEDD4L-224ENST00000588712 MTUS2Q5JR59 1369 aa16.23■□□□□ 0.19
NEDD4L-224ENST00000588712 UHRF1BP1LA0JNW5 1464 aa16.21■□□□□ 0.19
NEDD4L-224ENST00000588712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.21■□□□□ 0.19
NEDD4L-224ENST00000588712 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.19
NEDD4L-224ENST00000588712 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
NEDD4L-224ENST00000588712 ABCC2Q92887 1545 aa16.19■□□□□ 0.18
NEDD4L-224ENST00000588712 EHBP1L1Q8N3D4 1523 aa16.19■□□□□ 0.18
NEDD4L-224ENST00000588712 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
NEDD4L-224ENST00000588712 CDK13Q14004 1512 aaKnown RBP16.17■□□□□ 0.18
NEDD4L-224ENST00000588712 ATP10BO94823 1461 aa16.16■□□□□ 0.18
NEDD4L-224ENST00000588712 PCGF6Q9BYE7 350 aa16.15■□□□□ 0.18
NEDD4L-224ENST00000588712 ARHGEF11O15085 1522 aa16.14■□□□□ 0.17
NEDD4L-224ENST00000588712 SUPT6HQ7KZ85 1726 aaKnown RBP16.14■□□□□ 0.17
NEDD4L-224ENST00000588712 ARID3CA6NKF2 412 aa16.14■□□□□ 0.17
NEDD4L-224ENST00000588712 TROQ12816 1431 aaPredicted RBP16.12■□□□□ 0.17
NEDD4L-224ENST00000588712 KDM5BQ9UGL1 1544 aa16.11■□□□□ 0.17
NEDD4L-224ENST00000588712 NPM1P06748 294 aaKnown RBP eCLIP16.1■□□□□ 0.17
NEDD4L-224ENST00000588712 MAGI3Q5TCQ9 1506 aa16.09■□□□□ 0.17
NEDD4L-224ENST00000588712 NCOA2Q15596 1464 aa16.09■□□□□ 0.17
NEDD4L-224ENST00000588712 RRBP1Q9P2E9 1410 aaKnown RBP16.08■□□□□ 0.16
NEDD4L-224ENST00000588712 ADCY10Q96PN6 1610 aa16.06■□□□□ 0.16
NEDD4L-224ENST00000588712 PHLDB1Q86UU1 1377 aa16.06■□□□□ 0.16
NEDD4L-224ENST00000588712 RIMBP3CA6NJZ7 1639 aa16.05■□□□□ 0.16
NEDD4L-224ENST00000588712 RIMBP3BA6NNM3 1639 aa16.05■□□□□ 0.16
NEDD4L-224ENST00000588712 RIMBP3Q9UFD9 1639 aa16.05■□□□□ 0.16
NEDD4L-224ENST00000588712 CCNB3Q8WWL7 1395 aa16.05■□□□□ 0.16
NEDD4L-224ENST00000588712 ZCCHC11Q5TAX3 1644 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-224ENST00000588712 MYOM3Q5VTT5 1437 aa16.04■□□□□ 0.16
NEDD4L-224ENST00000588712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.04■□□□□ 0.16
NEDD4L-224ENST00000588712 KIF14Q15058 1648 aa16.03■□□□□ 0.16
NEDD4L-224ENST00000588712 MIA2Q96PC5 1412 aa16.02■□□□□ 0.16
NEDD4L-224ENST00000588712 FGD6Q6ZV73 1430 aa16■□□□□ 0.15
NEDD4L-224ENST00000588712 CYB5RLQ6IPT4 315 aa16■□□□□ 0.15
NEDD4L-224ENST00000588712 ITSN2Q9NZM3 1697 aa15.97■□□□□ 0.15
NEDD4L-224ENST00000588712 WDR7Q9Y4E6 1490 aa15.96■□□□□ 0.15
NEDD4L-224ENST00000588712 FAM50AQ14320 339 aaKnown RBP15.96■□□□□ 0.15
NEDD4L-224ENST00000588712 ABCC10Q5T3U5 1492 aa15.95■□□□□ 0.14
NEDD4L-224ENST00000588712 CFDP1Q9UEE9 299 aaPredicted RBP15.95■□□□□ 0.14
NEDD4L-224ENST00000588712 GPATCH8Q9UKJ3 1502 aaKnown RBP15.94■□□□□ 0.14
NEDD4L-224ENST00000588712 KCNH8Q96L42 1107 aa15.94■□□□□ 0.14
NEDD4L-224ENST00000588712 ASXL2Q76L83 1435 aa15.94■□□□□ 0.14
NEDD4L-224ENST00000588712 TCOF1Q13428 1488 aaKnown RBP15.93■□□□□ 0.14
NEDD4L-224ENST00000588712 PTPN23Q9H3S7 1636 aa15.92■□□□□ 0.14
NEDD4L-224ENST00000588712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.9■□□□□ 0.14
NEDD4L-224ENST00000588712 MAPKBP1O60336 1514 aa15.89■□□□□ 0.14
NEDD4L-224ENST00000588712 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
NEDD4L-224ENST00000588712 PLCH2O75038 1416 aa15.87■□□□□ 0.13
NEDD4L-224ENST00000588712 RSPH4AQ5TD94 716 aa15.87■□□□□ 0.13
NEDD4L-224ENST00000588712 MYO5CQ9NQX4 1742 aa15.86■□□□□ 0.13
NEDD4L-224ENST00000588712 ARAP3Q8WWN8 1544 aa15.86■□□□□ 0.13
NEDD4L-224ENST00000588712 PREX2Q70Z35 1606 aa15.86■□□□□ 0.13
NEDD4L-224ENST00000588712 TTC37Q6PGP7 1564 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms