RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 EFCAB5A4FU69 1503 aa19.96■□□□□ 0.79
TMED1-204ENST00000588289 RIMBP3CA6NJZ7 1639 aa19.94■□□□□ 0.78
TMED1-204ENST00000588289 RIMBP3BA6NNM3 1639 aa19.94■□□□□ 0.78
TMED1-204ENST00000588289 RIMBP3Q9UFD9 1639 aa19.94■□□□□ 0.78
TMED1-204ENST00000588289 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
TMED1-204ENST00000588289 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
TMED1-204ENST00000588289 IQGAP2Q13576 1575 aa19.9■□□□□ 0.78
TMED1-204ENST00000588289 VPS8Q8N3P4 1428 aa19.86■□□□□ 0.77
TMED1-204ENST00000588289 AEBP2Q6ZN18 517 aaPredicted RBP19.85■□□□□ 0.77
TMED1-204ENST00000588289 RANGAP1P46060 587 aaPredicted RBP19.84■□□□□ 0.77
TMED1-204ENST00000588289 APLP2Q06481 763 aa19.83■□□□□ 0.77
TMED1-204ENST00000588289 KIAA0586Q9BVV6 1533 aa19.82■□□□□ 0.76
TMED1-204ENST00000588289 CHD1O14646 1710 aa19.82■□□□□ 0.76
TMED1-204ENST00000588289 FBLN2P98095 1184 aa19.8■□□□□ 0.76
TMED1-204ENST00000588289 ARHGAP35Q9NRY4 1499 aa19.79■□□□□ 0.76
TMED1-204ENST00000588289 SAMD9Q5K651 1589 aa19.78■□□□□ 0.76
TMED1-204ENST00000588289 ARAP1Q96P48 1450 aa19.77■□□□□ 0.76
TMED1-204ENST00000588289 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
TMED1-204ENST00000588289 TRHP20396 242 aaPredicted RBP19.76■□□□□ 0.75
TMED1-204ENST00000588289 UGGT2Q9NYU1 1516 aa19.75■□□□□ 0.75
TMED1-204ENST00000588289 NUP160Q12769 1436 aa19.75■□□□□ 0.75
TMED1-204ENST00000588289 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
TMED1-204ENST00000588289 CEP170Q5SW79 1584 aa19.74■□□□□ 0.75
TMED1-204ENST00000588289 CYB5RLQ6IPT4 315 aa19.72■□□□□ 0.75
TMED1-204ENST00000588289 CARMIL2Q6F5E8 1435 aa19.69■□□□□ 0.74
TMED1-204ENST00000588289 FYCO1Q9BQS8 1478 aa19.66■□□□□ 0.74
TMED1-204ENST00000588289 KIAA0556O60303 1618 aa19.65■□□□□ 0.74
TMED1-204ENST00000588289 FHOD3Q2V2M9 1422 aa19.64■□□□□ 0.73
TMED1-204ENST00000588289 MAP3K1Q13233 1512 aa19.62■□□□□ 0.73
TMED1-204ENST00000588289 PCF11O94913 1555 aaKnown RBP19.6■□□□□ 0.73
TMED1-204ENST00000588289 CASKIN1Q8WXD9 1431 aa19.59■□□□□ 0.73
TMED1-204ENST00000588289 HECW1Q76N89 1606 aa19.59■□□□□ 0.73
TMED1-204ENST00000588289 P3H3Q8IVL6 736 aa19.58■□□□□ 0.72
TMED1-204ENST00000588289 CFAP43Q8NDM7 1665 aa19.57■□□□□ 0.72
TMED1-204ENST00000588289 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
TMED1-204ENST00000588289 JPH4Q96JJ6 628 aa19.56■□□□□ 0.72
TMED1-204ENST00000588289 SHROOM2Q13796 1616 aa19.55■□□□□ 0.72
TMED1-204ENST00000588289 DISP1Q96F81 1524 aa19.55■□□□□ 0.72
TMED1-204ENST00000588289 CCDC18Q5T9S5 1454 aa19.54■□□□□ 0.72
TMED1-204ENST00000588289 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
TMED1-204ENST00000588289 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
TMED1-204ENST00000588289 ATP1B4Q9UN42 357 aaPredicted RBP19.5■□□□□ 0.71
TMED1-204ENST00000588289 RAPGEF6Q8TEU7 1601 aa19.48■□□□□ 0.71
TMED1-204ENST00000588289 PRG4Q92954 1404 aaPredicted RBP19.47■□□□□ 0.71
TMED1-204ENST00000588289 CDK11AQ9UQ88 783 aaPredicted RBP19.4■□□□□ 0.7
TMED1-204ENST00000588289 LRRC9Q6ZRR7 1453 aa19.4■□□□□ 0.7
TMED1-204ENST00000588289 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.69
TMED1-204ENST00000588289 EHBP1L1Q8N3D4 1523 aa19.39■□□□□ 0.69
TMED1-204ENST00000588289 PTPRGP23470 1445 aa19.38■□□□□ 0.69
TMED1-204ENST00000588289 MTUS2Q5JR59 1369 aa19.38■□□□□ 0.69
TMED1-204ENST00000588289 PPARGC1BQ86YN6 1023 aaKnown RBP19.38■□□□□ 0.69
TMED1-204ENST00000588289 SUPT6HQ7KZ85 1726 aaKnown RBP19.37■□□□□ 0.69
TMED1-204ENST00000588289 LRRIQ1Q96JM4 1722 aa19.37■□□□□ 0.69
TMED1-204ENST00000588289 EPRSP07814 1512 aaKnown RBP19.36■□□□□ 0.69
TMED1-204ENST00000588289 TTBK1Q5TCY1 1321 aaPredicted RBP19.33■□□□□ 0.69
TMED1-204ENST00000588289 ABCA8O94911 1581 aa19.33■□□□□ 0.69
TMED1-204ENST00000588289 NUP153P49790 1475 aaKnown RBP19.29■□□□□ 0.68
TMED1-204ENST00000588289 ILDR1Q86SU0 546 aaPredicted RBP19.29■□□□□ 0.68
TMED1-204ENST00000588289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.28■□□□□ 0.68
TMED1-204ENST00000588289 HNRNPUL2Q1KMD3 747 aaKnown RBP19.28■□□□□ 0.68
TMED1-204ENST00000588289 PLB1Q6P1J6 1458 aa19.28■□□□□ 0.68
TMED1-204ENST00000588289 UACAQ9BZF9 1416 aa19.27■□□□□ 0.68
TMED1-204ENST00000588289 KANK4Q5T7N3 995 aaPredicted RBP19.27■□□□□ 0.68
TMED1-204ENST00000588289 CDK13Q14004 1512 aaKnown RBP19.25■□□□□ 0.67
TMED1-204ENST00000588289 ABCC2Q92887 1545 aa19.25■□□□□ 0.67
TMED1-204ENST00000588289 UHRF1BP1LA0JNW5 1464 aa19.22■□□□□ 0.67
TMED1-204ENST00000588289 ERCC6L2Q5T890 1561 aa19.2■□□□□ 0.66
TMED1-204ENST00000588289 RRBP1Q9P2E9 1410 aaKnown RBP19.2■□□□□ 0.66
TMED1-204ENST00000588289 ADCY10Q96PN6 1610 aa19.2■□□□□ 0.66
TMED1-204ENST00000588289 ITSN2Q9NZM3 1697 aa19.2■□□□□ 0.66
TMED1-204ENST00000588289 PLEKHD1A6NEE1 506 aa19.19■□□□□ 0.66
TMED1-204ENST00000588289 KIF14Q15058 1648 aa19.18■□□□□ 0.66
TMED1-204ENST00000588289 TROQ12816 1431 aaPredicted RBP19.18■□□□□ 0.66
TMED1-204ENST00000588289 CCNB3Q8WWL7 1395 aa19.18■□□□□ 0.66
TMED1-204ENST00000588289 NCOA2Q15596 1464 aa19.17■□□□□ 0.66
TMED1-204ENST00000588289 MYOM3Q5VTT5 1437 aa19.14■□□□□ 0.65
TMED1-204ENST00000588289 ATP10BO94823 1461 aa19.14■□□□□ 0.65
TMED1-204ENST00000588289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.13■□□□□ 0.65
TMED1-204ENST00000588289 ZCCHC11Q5TAX3 1644 aaKnown RBP19.12■□□□□ 0.65
TMED1-204ENST00000588289 MAGI3Q5TCQ9 1506 aa19.12■□□□□ 0.65
TMED1-204ENST00000588289 ARID3CA6NKF2 412 aa19.11■□□□□ 0.65
TMED1-204ENST00000588289 MIA2Q96PC5 1412 aa19.1■□□□□ 0.65
TMED1-204ENST00000588289 PHLDB1Q86UU1 1377 aa19.1■□□□□ 0.65
TMED1-204ENST00000588289 FGD6Q6ZV73 1430 aa19.09■□□□□ 0.65
TMED1-204ENST00000588289 KDM5BQ9UGL1 1544 aa19.09■□□□□ 0.65
TMED1-204ENST00000588289 NPM1P06748 294 aaKnown RBP eCLIP19.08■□□□□ 0.64
TMED1-204ENST00000588289 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
TMED1-204ENST00000588289 FAM50AQ14320 339 aaKnown RBP19.04■□□□□ 0.64
TMED1-204ENST00000588289 MYO5CQ9NQX4 1742 aa19.02■□□□□ 0.63
TMED1-204ENST00000588289 TCOF1Q13428 1488 aaKnown RBP19■□□□□ 0.63
TMED1-204ENST00000588289 CDC42BPAQ5VT25 1732 aa19■□□□□ 0.63
TMED1-204ENST00000588289 PREX2Q70Z35 1606 aa18.96■□□□□ 0.63
TMED1-204ENST00000588289 WDR7Q9Y4E6 1490 aa18.96■□□□□ 0.63
TMED1-204ENST00000588289 CFDP1Q9UEE9 299 aaPredicted RBP18.95■□□□□ 0.62
TMED1-204ENST00000588289 ABCC10Q5T3U5 1492 aa18.93■□□□□ 0.62
TMED1-204ENST00000588289 GPATCH8Q9UKJ3 1502 aaKnown RBP18.93■□□□□ 0.62
TMED1-204ENST00000588289 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
TMED1-204ENST00000588289 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
TMED1-204ENST00000588289 KDM4FA0A1W2PPD8 638 aa18.9■□□□□ 0.62
TMED1-204ENST00000588289 ITGAEP38570 1179 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms