RNA–Protein interactions for RNA: ENST00000588143.5

GRN-211, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-211ENST00000588143 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
GRN-211ENST00000588143 KIAA0586Q9BVV6 1533 aa25.02■■□□□ 1.6
GRN-211ENST00000588143 EEA1Q15075 1411 aa25■■□□□ 1.59
GRN-211ENST00000588143 PRXQ9BXM0 1461 aa24.96■■□□□ 1.59
GRN-211ENST00000588143 ARAP1Q96P48 1450 aa24.96■■□□□ 1.59
GRN-211ENST00000588143 SHROOM2Q13796 1616 aa24.95■■□□□ 1.58
GRN-211ENST00000588143 PRG4Q92954 1404 aaPredicted RBP24.92■■□□□ 1.58
GRN-211ENST00000588143 FAM9AQ8IZU1 332 aaPredicted RBP24.88■■□□□ 1.57
GRN-211ENST00000588143 ERCC6L2Q5T890 1561 aa24.87■■□□□ 1.57
GRN-211ENST00000588143 IQGAP2Q13576 1575 aa24.78■■□□□ 1.56
GRN-211ENST00000588143 CARMIL2Q6F5E8 1435 aa24.74■■□□□ 1.55
GRN-211ENST00000588143 UGGT2Q9NYU1 1516 aa24.71■■□□□ 1.55
GRN-211ENST00000588143 TNIKQ9UKE5 1360 aa24.67■■□□□ 1.54
GRN-211ENST00000588143 DISP1Q96F81 1524 aa24.66■■□□□ 1.54
GRN-211ENST00000588143 PTPRGP23470 1445 aa24.66■■□□□ 1.54
GRN-211ENST00000588143 KIF21BO75037 1637 aa24.64■■□□□ 1.53
GRN-211ENST00000588143 CTTNBP2Q8WZ74 1663 aa24.62■■□□□ 1.53
GRN-211ENST00000588143 GOLGA3Q08378 1498 aa24.59■■□□□ 1.53
GRN-211ENST00000588143 UBTFP17480 764 aaKnown RBP24.56■■□□□ 1.52
GRN-211ENST00000588143 TTBK1Q5TCY1 1321 aaPredicted RBP24.54■■□□□ 1.52
GRN-211ENST00000588143 NPM1P06748 294 aaKnown RBP eCLIP24.53■■□□□ 1.52
GRN-211ENST00000588143 KIAA0556O60303 1618 aa24.53■■□□□ 1.52
GRN-211ENST00000588143 EHMT2Q96KQ7 1210 aa24.49■■□□□ 1.51
GRN-211ENST00000588143 TRHP20396 242 aaPredicted RBP24.48■■□□□ 1.51
GRN-211ENST00000588143 UACAQ9BZF9 1416 aa24.47■■□□□ 1.51
GRN-211ENST00000588143 P3H3Q8IVL6 736 aa24.46■■□□□ 1.51
GRN-211ENST00000588143 UHRF1BP1LA0JNW5 1464 aa24.45■■□□□ 1.51
GRN-211ENST00000588143 ADCY10Q96PN6 1610 aa24.45■■□□□ 1.5
GRN-211ENST00000588143 RANGAP1P46060 587 aaPredicted RBP24.43■■□□□ 1.5
GRN-211ENST00000588143 SAMD9Q5K651 1589 aa24.4■■□□□ 1.5
GRN-211ENST00000588143 ABCC2Q92887 1545 aa24.38■■□□□ 1.49
GRN-211ENST00000588143 PLB1Q6P1J6 1458 aa24.34■■□□□ 1.49
GRN-211ENST00000588143 MAPKBP1O60336 1514 aa24.33■■□□□ 1.49
GRN-211ENST00000588143 EFCAB5A4FU69 1503 aa24.32■■□□□ 1.48
GRN-211ENST00000588143 KDM5BQ9UGL1 1544 aa24.32■■□□□ 1.48
GRN-211ENST00000588143 ABCA8O94911 1581 aa24.3■■□□□ 1.48
GRN-211ENST00000588143 FHOD3Q2V2M9 1422 aa24.27■■□□□ 1.48
GRN-211ENST00000588143 FAM69CQ0P6D2 419 aa24.25■■□□□ 1.47
GRN-211ENST00000588143 ABCC10Q5T3U5 1492 aa24.25■■□□□ 1.47
GRN-211ENST00000588143 ARHGAP35Q9NRY4 1499 aa24.24■■□□□ 1.47
GRN-211ENST00000588143 ASXL2Q76L83 1435 aa24.23■■□□□ 1.47
GRN-211ENST00000588143 LOC105371045A0A1W2PR82 267 aa24.18■■□□□ 1.46
GRN-211ENST00000588143 ATP10BO94823 1461 aa24.18■■□□□ 1.46
GRN-211ENST00000588143 ZCCHC11Q5TAX3 1644 aaKnown RBP24.17■■□□□ 1.46
GRN-211ENST00000588143 FMN1Q68DA7 1419 aa24.16■■□□□ 1.46
GRN-211ENST00000588143 RAPGEF6Q8TEU7 1601 aa24.13■■□□□ 1.45
GRN-211ENST00000588143 CLIP1P30622 1438 aa24.12■■□□□ 1.45
GRN-211ENST00000588143 ARID3CA6NKF2 412 aa24.12■■□□□ 1.45
GRN-211ENST00000588143 NUP153P49790 1475 aaKnown RBP24.12■■□□□ 1.45
GRN-211ENST00000588143 DIP2BQ9P265 1576 aa24.12■■□□□ 1.45
GRN-211ENST00000588143 KIF13AQ9H1H9 1805 aa24.11■■□□□ 1.45
GRN-211ENST00000588143 WDR7Q9Y4E6 1490 aa24.09■■□□□ 1.45
GRN-211ENST00000588143 EPRSP07814 1512 aaKnown RBP24.08■■□□□ 1.45
GRN-211ENST00000588143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.07■■□□□ 1.44
GRN-211ENST00000588143 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
GRN-211ENST00000588143 KCNH8Q96L42 1107 aa24.07■■□□□ 1.44
GRN-211ENST00000588143 GLI2P10070 1586 aa24.07■■□□□ 1.44
GRN-211ENST00000588143 PLEKHD1A6NEE1 506 aa24.04■■□□□ 1.44
GRN-211ENST00000588143 ATP1B4Q9UN42 357 aaPredicted RBP24.02■■□□□ 1.44
GRN-211ENST00000588143 CEP162Q5TB80 1403 aa24■■□□□ 1.43
GRN-211ENST00000588143 CASKIN1Q8WXD9 1431 aa23.97■■□□□ 1.43
GRN-211ENST00000588143 CDK11AQ9UQ88 783 aaPredicted RBP23.95■■□□□ 1.42
GRN-211ENST00000588143 HECW1Q76N89 1606 aa23.92■■□□□ 1.42
GRN-211ENST00000588143 CD109Q6YHK3 1445 aa23.92■■□□□ 1.42
GRN-211ENST00000588143 MAP3K4Q9Y6R4 1608 aa23.9■■□□□ 1.42
GRN-211ENST00000588143 CDK13Q14004 1512 aaKnown RBP23.89■■□□□ 1.42
GRN-211ENST00000588143 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
GRN-211ENST00000588143 TSPOAP1O95153 1857 aa23.86■■□□□ 1.41
GRN-211ENST00000588143 MAGI3Q5TCQ9 1506 aa23.85■■□□□ 1.41
GRN-211ENST00000588143 TEX14Q8IWB6 1497 aa23.84■■□□□ 1.41
GRN-211ENST00000588143 CFAP43Q8NDM7 1665 aa23.83■■□□□ 1.41
GRN-211ENST00000588143 PPRC1Q5VV67 1664 aaKnown RBP23.83■■□□□ 1.4
GRN-211ENST00000588143 PCF11O94913 1555 aaKnown RBP23.82■■□□□ 1.4
GRN-211ENST00000588143 CCDC18Q5T9S5 1454 aa23.82■■□□□ 1.4
GRN-211ENST00000588143 ABCA9Q8IUA7 1624 aa23.81■■□□□ 1.4
GRN-211ENST00000588143 TROQ12816 1431 aaPredicted RBP23.78■■□□□ 1.4
GRN-211ENST00000588143 PHLDB1Q86UU1 1377 aa23.77■■□□□ 1.4
GRN-211ENST00000588143 LRRIQ1Q96JM4 1722 aa23.76■■□□□ 1.39
GRN-211ENST00000588143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.74■■□□□ 1.39
GRN-211ENST00000588143 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
GRN-211ENST00000588143 COL17A1Q9UMD9 1497 aaPredicted RBP23.73■■□□□ 1.39
GRN-211ENST00000588143 KDM6BO15054 1643 aa23.71■■□□□ 1.39
GRN-211ENST00000588143 PLCH2O75038 1416 aa23.68■■□□□ 1.38
GRN-211ENST00000588143 NEO1Q92859 1461 aa23.68■■□□□ 1.38
GRN-211ENST00000588143 ARAP3Q8WWN8 1544 aa23.66■■□□□ 1.38
GRN-211ENST00000588143 TTC37Q6PGP7 1564 aa23.65■■□□□ 1.38
GRN-211ENST00000588143 EFCAB2Q5VUJ9 269 aa23.64■■□□□ 1.37
GRN-211ENST00000588143 MTUS2Q5JR59 1369 aa23.63■■□□□ 1.37
GRN-211ENST00000588143 KIF14Q15058 1648 aa23.62■■□□□ 1.37
GRN-211ENST00000588143 FANCAO15360 1455 aa23.61■■□□□ 1.37
GRN-211ENST00000588143 AKNAQ7Z591 1439 aa23.6■■□□□ 1.37
GRN-211ENST00000588143 RAPGEF3O95398 923 aa23.57■■□□□ 1.36
GRN-211ENST00000588143 MAP3K1Q13233 1512 aa23.56■■□□□ 1.36
GRN-211ENST00000588143 CFAP74Q9C0B2 1584 aa23.52■■□□□ 1.36
GRN-211ENST00000588143 MYO5CQ9NQX4 1742 aa23.51■■□□□ 1.35
GRN-211ENST00000588143 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
GRN-211ENST00000588143 APLP2Q06481 763 aa23.51■■□□□ 1.35
GRN-211ENST00000588143 TIAM1Q13009 1591 aa23.51■■□□□ 1.35
GRN-211ENST00000588143 DENND4BO75064 1496 aaPredicted RBP23.5■■□□□ 1.35
GRN-211ENST00000588143 CCNB3Q8WWL7 1395 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms