RNA–Protein interactions for RNA: ENST00000588118.5

DNMT1-214, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-214ENST00000588118 EFCAB5A4FU69 1503 aa21.56■■□□□ 1.04
DNMT1-214ENST00000588118 KIAA0586Q9BVV6 1533 aa21.56■■□□□ 1.04
DNMT1-214ENST00000588118 RANGAP1P46060 587 aaPredicted RBP21.56■■□□□ 1.04
DNMT1-214ENST00000588118 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
DNMT1-214ENST00000588118 IQGAP2Q13576 1575 aa21.54■■□□□ 1.04
DNMT1-214ENST00000588118 FBLN2P98095 1184 aa21.54■■□□□ 1.04
DNMT1-214ENST00000588118 NUP160Q12769 1436 aa21.54■■□□□ 1.04
DNMT1-214ENST00000588118 VPS8Q8N3P4 1428 aa21.53■■□□□ 1.04
DNMT1-214ENST00000588118 ARAP1Q96P48 1450 aa21.51■■□□□ 1.03
DNMT1-214ENST00000588118 CEP170Q5SW79 1584 aa21.49■■□□□ 1.03
DNMT1-214ENST00000588118 CHD1O14646 1710 aa21.46■■□□□ 1.03
DNMT1-214ENST00000588118 UGGT2Q9NYU1 1516 aa21.46■■□□□ 1.03
DNMT1-214ENST00000588118 SAMD9Q5K651 1589 aa21.45■■□□□ 1.02
DNMT1-214ENST00000588118 FHOD3Q2V2M9 1422 aa21.37■■□□□ 1.01
DNMT1-214ENST00000588118 FMN1Q68DA7 1419 aa21.37■■□□□ 1.01
DNMT1-214ENST00000588118 P3H3Q8IVL6 736 aa21.35■■□□□ 1.01
DNMT1-214ENST00000588118 JPH4Q96JJ6 628 aa21.34■■□□□ 1.01
DNMT1-214ENST00000588118 APLP2Q06481 763 aa21.33■■□□□ 1.01
DNMT1-214ENST00000588118 CARMIL2Q6F5E8 1435 aa21.32■■□□□ 1
DNMT1-214ENST00000588118 KIAA0556O60303 1618 aa21.32■■□□□ 1
DNMT1-214ENST00000588118 DISP1Q96F81 1524 aa21.31■■□□□ 1
DNMT1-214ENST00000588118 CLASP1Q7Z460 1538 aa21.27■■□□□ 1
DNMT1-214ENST00000588118 FYCO1Q9BQS8 1478 aa21.26■□□□□ 0.99
DNMT1-214ENST00000588118 CASKIN1Q8WXD9 1431 aa21.26■□□□□ 0.99
DNMT1-214ENST00000588118 SHROOM2Q13796 1616 aa21.26■□□□□ 0.99
DNMT1-214ENST00000588118 MAP3K1Q13233 1512 aa21.24■□□□□ 0.99
DNMT1-214ENST00000588118 PCF11O94913 1555 aaKnown RBP21.23■□□□□ 0.99
DNMT1-214ENST00000588118 PRG4Q92954 1404 aaPredicted RBP21.21■□□□□ 0.99
DNMT1-214ENST00000588118 OSCARQ8IYS5 282 aa21.18■□□□□ 0.98
DNMT1-214ENST00000588118 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
DNMT1-214ENST00000588118 TIAM1Q13009 1591 aa21.14■□□□□ 0.98
DNMT1-214ENST00000588118 TRIM26Q12899 539 aaPredicted RBP21.13■□□□□ 0.97
DNMT1-214ENST00000588118 ATP1B4Q9UN42 357 aaPredicted RBP21.12■□□□□ 0.97
DNMT1-214ENST00000588118 CFAP43Q8NDM7 1665 aa21.12■□□□□ 0.97
DNMT1-214ENST00000588118 CCDC18Q5T9S5 1454 aa21.11■□□□□ 0.97
DNMT1-214ENST00000588118 PPARGC1BQ86YN6 1023 aaKnown RBP21.1■□□□□ 0.97
DNMT1-214ENST00000588118 PTPRGP23470 1445 aa21.09■□□□□ 0.97
DNMT1-214ENST00000588118 RAPGEF6Q8TEU7 1601 aa21.08■□□□□ 0.97
DNMT1-214ENST00000588118 LRRC9Q6ZRR7 1453 aa21.05■□□□□ 0.96
DNMT1-214ENST00000588118 ABCA8O94911 1581 aa21.03■□□□□ 0.96
DNMT1-214ENST00000588118 KANK4Q5T7N3 995 aaPredicted RBP21.03■□□□□ 0.96
DNMT1-214ENST00000588118 EPRSP07814 1512 aaKnown RBP21.03■□□□□ 0.96
DNMT1-214ENST00000588118 TTBK1Q5TCY1 1321 aaPredicted RBP21.03■□□□□ 0.96
DNMT1-214ENST00000588118 ERCC6L2Q5T890 1561 aa21.02■□□□□ 0.95
DNMT1-214ENST00000588118 PLB1Q6P1J6 1458 aa21.01■□□□□ 0.95
DNMT1-214ENST00000588118 NUP153P49790 1475 aaKnown RBP21.01■□□□□ 0.95
DNMT1-214ENST00000588118 LRRIQ1Q96JM4 1722 aa20.99■□□□□ 0.95
DNMT1-214ENST00000588118 UACAQ9BZF9 1416 aa20.97■□□□□ 0.95
DNMT1-214ENST00000588118 MTUS2Q5JR59 1369 aa20.97■□□□□ 0.95
DNMT1-214ENST00000588118 EHBP1L1Q8N3D4 1523 aa20.96■□□□□ 0.95
DNMT1-214ENST00000588118 PCGF6Q9BYE7 350 aa20.96■□□□□ 0.95
DNMT1-214ENST00000588118 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
DNMT1-214ENST00000588118 CDK13Q14004 1512 aaKnown RBP20.94■□□□□ 0.94
DNMT1-214ENST00000588118 UHRF1BP1LA0JNW5 1464 aa20.91■□□□□ 0.94
DNMT1-214ENST00000588118 ABCC2Q92887 1545 aa20.91■□□□□ 0.94
DNMT1-214ENST00000588118 SUPT6HQ7KZ85 1726 aaKnown RBP20.87■□□□□ 0.93
DNMT1-214ENST00000588118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.87■□□□□ 0.93
DNMT1-214ENST00000588118 HNRNPUL2Q1KMD3 747 aaKnown RBP20.87■□□□□ 0.93
DNMT1-214ENST00000588118 ATP10BO94823 1461 aa20.87■□□□□ 0.93
DNMT1-214ENST00000588118 MAGI3Q5TCQ9 1506 aa20.85■□□□□ 0.93
DNMT1-214ENST00000588118 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
DNMT1-214ENST00000588118 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
DNMT1-214ENST00000588118 RRBP1Q9P2E9 1410 aaKnown RBP20.84■□□□□ 0.93
DNMT1-214ENST00000588118 PLEKHD1A6NEE1 506 aa20.82■□□□□ 0.92
DNMT1-214ENST00000588118 NCOA2Q15596 1464 aa20.81■□□□□ 0.92
DNMT1-214ENST00000588118 ARHGEF11O15085 1522 aa20.81■□□□□ 0.92
DNMT1-214ENST00000588118 PHLDB1Q86UU1 1377 aa20.8■□□□□ 0.92
DNMT1-214ENST00000588118 KDM5BQ9UGL1 1544 aa20.78■□□□□ 0.92
DNMT1-214ENST00000588118 CCNB3Q8WWL7 1395 aa20.78■□□□□ 0.92
DNMT1-214ENST00000588118 ADCY10Q96PN6 1610 aa20.76■□□□□ 0.91
DNMT1-214ENST00000588118 MYOM3Q5VTT5 1437 aa20.75■□□□□ 0.91
DNMT1-214ENST00000588118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.73■□□□□ 0.91
DNMT1-214ENST00000588118 ZCCHC11Q5TAX3 1644 aaKnown RBP20.72■□□□□ 0.91
DNMT1-214ENST00000588118 KIF14Q15058 1648 aa20.71■□□□□ 0.91
DNMT1-214ENST00000588118 FGD6Q6ZV73 1430 aa20.71■□□□□ 0.91
DNMT1-214ENST00000588118 MIA2Q96PC5 1412 aa20.7■□□□□ 0.9
DNMT1-214ENST00000588118 RIMBP3CA6NJZ7 1639 aa20.68■□□□□ 0.9
DNMT1-214ENST00000588118 RIMBP3BA6NNM3 1639 aa20.68■□□□□ 0.9
DNMT1-214ENST00000588118 RIMBP3Q9UFD9 1639 aa20.68■□□□□ 0.9
DNMT1-214ENST00000588118 NPM1P06748 294 aaKnown RBP eCLIP20.66■□□□□ 0.9
DNMT1-214ENST00000588118 ITSN2Q9NZM3 1697 aa20.64■□□□□ 0.9
DNMT1-214ENST00000588118 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
DNMT1-214ENST00000588118 ABCC10Q5T3U5 1492 aa20.62■□□□□ 0.89
DNMT1-214ENST00000588118 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
DNMT1-214ENST00000588118 PTPN23Q9H3S7 1636 aa20.62■□□□□ 0.89
DNMT1-214ENST00000588118 GPATCH8Q9UKJ3 1502 aaKnown RBP20.61■□□□□ 0.89
DNMT1-214ENST00000588118 WDR7Q9Y4E6 1490 aa20.6■□□□□ 0.89
DNMT1-214ENST00000588118 CFDP1Q9UEE9 299 aaPredicted RBP20.57■□□□□ 0.88
DNMT1-214ENST00000588118 CYB5RLQ6IPT4 315 aa20.56■□□□□ 0.88
DNMT1-214ENST00000588118 ASXL2Q76L83 1435 aa20.55■□□□□ 0.88
DNMT1-214ENST00000588118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.54■□□□□ 0.882e-6■□□□□ 8.3
DNMT1-214ENST00000588118 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
DNMT1-214ENST00000588118 KCNH8Q96L42 1107 aa20.52■□□□□ 0.88
DNMT1-214ENST00000588118 PREX2Q70Z35 1606 aa20.51■□□□□ 0.87
DNMT1-214ENST00000588118 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
DNMT1-214ENST00000588118 ITGAEP38570 1179 aa20.49■□□□□ 0.87
DNMT1-214ENST00000588118 CAMSAP2Q08AD1 1489 aa20.49■□□□□ 0.87
DNMT1-214ENST00000588118 MAPKBP1O60336 1514 aa20.48■□□□□ 0.87
DNMT1-214ENST00000588118 MYO5CQ9NQX4 1742 aa20.48■□□□□ 0.87
DNMT1-214ENST00000588118 ARAP3Q8WWN8 1544 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms