RNA–Protein interactions for RNA: ENST00000588087.5

TMC6-209, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 2,384 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-209ENST00000588087 TOPBP1Q92547 1522 aa31.58■■■□□ 2.65
TMC6-209ENST00000588087 ATP1B4Q9UN42 357 aaPredicted RBP31.57■■■□□ 2.64
TMC6-209ENST00000588087 LRRC9Q6ZRR7 1453 aa31.56■■■□□ 2.64
TMC6-209ENST00000588087 MAP3K1Q13233 1512 aa31.54■■■□□ 2.64
TMC6-209ENST00000588087 ABCA10Q8WWZ4 1543 aa31.54■■■□□ 2.64
TMC6-209ENST00000588087 PHLDB1Q86UU1 1377 aa31.54■■■□□ 2.64
TMC6-209ENST00000588087 FHOD3Q2V2M9 1422 aa31.51■■■□□ 2.64
TMC6-209ENST00000588087 RAB3GAP2Q9H2M9 1393 aa31.51■■■□□ 2.63
TMC6-209ENST00000588087 FHAD1B1AJZ9 1412 aa31.5■■■□□ 2.63
TMC6-209ENST00000588087 PCF11O94913 1555 aaKnown RBP31.49■■■□□ 2.63
TMC6-209ENST00000588087 FAM50AQ14320 339 aaKnown RBP31.45■■■□□ 2.63
TMC6-209ENST00000588087 PELP1Q8IZL8 1130 aaKnown RBP31.43■■■□□ 2.62
TMC6-209ENST00000588087 DNAJC5BQ9UF47 199 aa31.39■■■□□ 2.62
TMC6-209ENST00000588087 URB2Q14146 1524 aaKnown RBP31.36■■■□□ 2.61
TMC6-209ENST00000588087 CFAP43Q8NDM7 1665 aa31.36■■■□□ 2.61
TMC6-209ENST00000588087 SETD5Q9C0A6 1442 aa31.35■■■□□ 2.61
TMC6-209ENST00000588087 MAPKBP1O60336 1514 aa31.35■■■□□ 2.61
TMC6-209ENST00000588087 TDRD9Q8NDG6 1382 aaKnown RBP31.32■■■□□ 2.6
TMC6-209ENST00000588087 CUL7Q14999 1698 aa31.3■■■□□ 2.6
TMC6-209ENST00000588087 EFCAB5A4FU69 1503 aa31.3■■■□□ 2.6
TMC6-209ENST00000588087 FYCO1Q9BQS8 1478 aa31.3■■■□□ 2.6
TMC6-209ENST00000588087 CASKIN1Q8WXD9 1431 aa31.28■■■□□ 2.6
TMC6-209ENST00000588087 LAMC3Q9Y6N6 1575 aa31.24■■■□□ 2.59
TMC6-209ENST00000588087 CTTNBP2Q8WZ74 1663 aa31.2■■■□□ 2.59
TMC6-209ENST00000588087 SIN3AQ96ST3 1273 aa31.2■■■□□ 2.58
TMC6-209ENST00000588087 AQRO60306 1485 aaKnown RBP eCLIP31.19■■■□□ 2.581e-9■■■■■ 33.7
TMC6-209ENST00000588087 WDR97A6NE52 1622 aa31.18■■■□□ 2.58
TMC6-209ENST00000588087 FMN1Q68DA7 1419 aa31.15■■■□□ 2.58
TMC6-209ENST00000588087 GAPVD1Q14C86 1478 aa31.15■■■□□ 2.58
TMC6-209ENST00000588087 SNAPC4Q5SXM2 1469 aa31.13■■■□□ 2.57
TMC6-209ENST00000588087 ABCA5Q8WWZ7 1642 aa31.13■■■□□ 2.57
TMC6-209ENST00000588087 PDS5BQ9NTI5 1447 aa31.11■■■□□ 2.57
TMC6-209ENST00000588087 MTUS2Q5JR59 1369 aa31.08■■■□□ 2.57
TMC6-209ENST00000588087 FGD6Q6ZV73 1430 aa31.06■■■□□ 2.56
TMC6-209ENST00000588087 SAMD9Q5K651 1589 aa31.02■■■□□ 2.56
TMC6-209ENST00000588087 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.01■■■□□ 2.551e-7■■□□□ 13.2
TMC6-209ENST00000588087 KIF21AQ7Z4S6 1674 aa30.98■■■□□ 2.55
TMC6-209ENST00000588087 PTPRKQ15262 1439 aa30.95■■■□□ 2.55
TMC6-209ENST00000588087 GRIN2BQ13224 1484 aa30.95■■■□□ 2.54
TMC6-209ENST00000588087 NCOA2Q15596 1464 aa30.92■■■□□ 2.54
TMC6-209ENST00000588087 LRRIQ1Q96JM4 1722 aa30.91■■■□□ 2.54
TMC6-209ENST00000588087 KCNH8Q96L42 1107 aa30.9■■■□□ 2.54
TMC6-209ENST00000588087 TARBP1Q13395 1621 aaKnown RBP30.89■■■□□ 2.54
TMC6-209ENST00000588087 CCDC18Q5T9S5 1454 aa30.87■■■□□ 2.53
TMC6-209ENST00000588087 HIRIP3Q9BW71 556 aaPredicted RBP30.86■■■□□ 2.53
TMC6-209ENST00000588087 MYOM3Q5VTT5 1437 aa30.86■■■□□ 2.53
TMC6-209ENST00000588087 DDX10Q13206 875 aaKnown RBP30.85■■■□□ 2.53
TMC6-209ENST00000588087 HFM1A2PYH4 1435 aa30.82■■■□□ 2.52
TMC6-209ENST00000588087 PPP1R15AO75807 674 aaPredicted RBP30.81■■■□□ 2.52
TMC6-209ENST00000588087 TIMELESSQ9UNS1 1208 aa30.8■■■□□ 2.52
TMC6-209ENST00000588087 MAGI3Q5TCQ9 1506 aa30.79■■■□□ 2.52
TMC6-209ENST00000588087 EHBP1L1Q8N3D4 1523 aa30.79■■■□□ 2.52
TMC6-209ENST00000588087 THOC2Q8NI27 1593 aaKnown RBP30.78■■■□□ 2.52
TMC6-209ENST00000588087 PTPN23Q9H3S7 1636 aa30.77■■■□□ 2.52
TMC6-209ENST00000588087 ARID3CA6NKF2 412 aa30.76■■■□□ 2.51
TMC6-209ENST00000588087 NAIPQ13075 1403 aa30.76■■■□□ 2.51
TMC6-209ENST00000588087 SUPT6HQ7KZ85 1726 aaKnown RBP30.75■■■□□ 2.51
TMC6-209ENST00000588087 UACAQ9BZF9 1416 aa30.74■■■□□ 2.51
TMC6-209ENST00000588087 TONSLQ96HA7 1378 aa30.73■■■□□ 2.51
TMC6-209ENST00000588087 UGGT2Q9NYU1 1516 aa30.72■■■□□ 2.51
TMC6-209ENST00000588087 PBRM1Q86U86 1689 aa30.7■■■□□ 2.5
TMC6-209ENST00000588087 CHIC2Q9UKJ5 165 aa30.7■■■□□ 2.5
TMC6-209ENST00000588087 RRP7BPQ9NSQ0 103 aa30.69■■■□□ 2.5
TMC6-209ENST00000588087 IQGAP2Q13576 1575 aa30.67■■■□□ 2.5
TMC6-209ENST00000588087 ADAMTS12P58397 1594 aa30.67■■■□□ 2.5
TMC6-209ENST00000588087 ARHGEF11O15085 1522 aa30.66■■■□□ 2.5
TMC6-209ENST00000588087 MRC2Q9UBG0 1479 aa30.66■■■□□ 2.5
TMC6-209ENST00000588087 SUPT16HQ9Y5B9 1047 aaKnown RBP30.65■■■□□ 2.5
TMC6-209ENST00000588087 CDK13Q14004 1512 aaKnown RBP30.64■■■□□ 2.5
TMC6-209ENST00000588087 EPRSP07814 1512 aaKnown RBP30.63■■■□□ 2.49
TMC6-209ENST00000588087 HECW1Q76N89 1606 aa30.62■■■□□ 2.49
TMC6-209ENST00000588087 ZNF608Q9ULD9 1512 aaPredicted RBP30.59■■■□□ 2.49
TMC6-209ENST00000588087 TCOF1Q13428 1488 aaKnown RBP30.55■■■□□ 2.48
TMC6-209ENST00000588087 WDR62O43379 1518 aa30.53■■■□□ 2.48
TMC6-209ENST00000588087 TRIM52Q96A61 297 aa30.52■■■□□ 2.48
TMC6-209ENST00000588087 KDM5BQ9UGL1 1544 aa30.47■■■□□ 2.47
TMC6-209ENST00000588087 KDM6BO15054 1643 aa30.46■■■□□ 2.47
TMC6-209ENST00000588087 DENND4BO75064 1496 aaPredicted RBP30.46■■■□□ 2.47
TMC6-209ENST00000588087 IFT140Q96RY7 1462 aa30.46■■■□□ 2.47
TMC6-209ENST00000588087 ANP32CO43423 234 aa30.45■■■□□ 2.47
TMC6-209ENST00000588087 MIA2Q96PC5 1412 aa30.41■■■□□ 2.46
TMC6-209ENST00000588087 FOXD1Q16676 465 aa30.39■■■□□ 2.46
TMC6-209ENST00000588087 GCC2Q8IWJ2 1684 aa30.39■■■□□ 2.46
TMC6-209ENST00000588087 DISP1Q96F81 1524 aa30.39■■■□□ 2.46
TMC6-209ENST00000588087 KIAA0586Q9BVV6 1533 aa30.37■■■□□ 2.45
TMC6-209ENST00000588087 AKNAQ7Z591 1439 aa30.37■■■□□ 2.45
TMC6-209ENST00000588087 CCER2I3L3R5 266 aa30.36■■■□□ 2.45
TMC6-209ENST00000588087 MPHOSPH9Q99550 1183 aa30.36■■■□□ 2.45
TMC6-209ENST00000588087 ZNF644Q9H582 1327 aaPredicted RBP30.35■■■□□ 2.45
TMC6-209ENST00000588087 KIAA0556O60303 1618 aa30.35■■■□□ 2.45
TMC6-209ENST00000588087 NUP153P49790 1475 aaKnown RBP30.33■■■□□ 2.45
TMC6-209ENST00000588087 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
TMC6-209ENST00000588087 DAPK1P53355 1430 aa30.29■■■□□ 2.44
TMC6-209ENST00000588087 HSPA5P11021 654 aaKnown RBP30.28■■■□□ 2.44
TMC6-209ENST00000588087 EIF4G3O43432 1585 aaKnown RBP30.27■■■□□ 2.44
TMC6-209ENST00000588087 BCANQ96GW7 911 aa30.27■■■□□ 2.44
TMC6-209ENST00000588087 ABCC5O15440 1437 aa30.26■■■□□ 2.43
TMC6-209ENST00000588087 L3MBTL2Q969R5 705 aa30.23■■■□□ 2.43
TMC6-209ENST00000588087 RAPGEF6Q8TEU7 1601 aa30.22■■■□□ 2.43
TMC6-209ENST00000588087 WASHC2AQ641Q2 1341 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms