RNA–Protein interactions for RNA: ENST00000587998.5

LINC00906-202, long intergenic non-protein coding RNA 906, humanhuman

TSL 3 BASIC

Gene LINC00906, Length 648 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00906-202ENST00000587998 ERCC6L2Q5T890 1561 aa13.97□□□□□ -0.17
LINC00906-202ENST00000587998 SNAPC4Q5SXM2 1469 aa13.97□□□□□ -0.17
LINC00906-202ENST00000587998 KIF13AQ9H1H9 1805 aa13.96□□□□□ -0.17
LINC00906-202ENST00000587998 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.18
LINC00906-202ENST00000587998 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
LINC00906-202ENST00000587998 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
LINC00906-202ENST00000587998 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
LINC00906-202ENST00000587998 MAGI1Q96QZ7 1491 aaPredicted RBP13.92□□□□□ -0.18
LINC00906-202ENST00000587998 LMTK3Q96Q04 1460 aa13.9□□□□□ -0.18
LINC00906-202ENST00000587998 HECW2Q9P2P5 1572 aa13.9□□□□□ -0.18
LINC00906-202ENST00000587998 SYNJ2O15056 1496 aa13.89□□□□□ -0.19
LINC00906-202ENST00000587998 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
LINC00906-202ENST00000587998 ABCB7O75027 752 aa13.89□□□□□ -0.19
LINC00906-202ENST00000587998 FAM69CQ0P6D2 419 aa13.89□□□□□ -0.19
LINC00906-202ENST00000587998 SOCS7O14512 581 aa13.88□□□□□ -0.19
LINC00906-202ENST00000587998 SOGA1O94964 1423 aa13.86□□□□□ -0.19
LINC00906-202ENST00000587998 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
LINC00906-202ENST00000587998 ABCC10Q5T3U5 1492 aa13.85□□□□□ -0.19
LINC00906-202ENST00000587998 WDR97A6NE52 1622 aa13.83□□□□□ -0.2
LINC00906-202ENST00000587998 GRIN2BQ13224 1484 aa13.83□□□□□ -0.2
LINC00906-202ENST00000587998 KDM6BO15054 1643 aa13.82□□□□□ -0.2
LINC00906-202ENST00000587998 ADGRL1O94910 1474 aa13.8□□□□□ -0.2
LINC00906-202ENST00000587998 ZNF219Q9P2Y4 722 aaPredicted RBP13.8□□□□□ -0.2
LINC00906-202ENST00000587998 POTEHQ6S545 545 aa13.79□□□□□ -0.2
LINC00906-202ENST00000587998 ILDR2Q71H61 639 aa13.79□□□□□ -0.2
LINC00906-202ENST00000587998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.77□□□□□ -0.21
LINC00906-202ENST00000587998 APLP2Q06481 763 aa13.77□□□□□ -0.21
LINC00906-202ENST00000587998 HNRNPUL2Q1KMD3 747 aaKnown RBP13.77□□□□□ -0.21
LINC00906-202ENST00000587998 CCDC88BA6NC98 1476 aa13.75□□□□□ -0.21
LINC00906-202ENST00000587998 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
LINC00906-202ENST00000587998 DIP2BQ9P265 1576 aa13.73□□□□□ -0.21
LINC00906-202ENST00000587998 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
LINC00906-202ENST00000587998 MAPKBP1O60336 1514 aa13.71□□□□□ -0.21
LINC00906-202ENST00000587998 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC00906-202ENST00000587998 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
LINC00906-202ENST00000587998 NUP160Q12769 1436 aa13.67□□□□□ -0.22
LINC00906-202ENST00000587998 SHROOM2Q13796 1616 aa13.66□□□□□ -0.22
LINC00906-202ENST00000587998 GRIN2AQ12879 1464 aa13.63□□□□□ -0.23
LINC00906-202ENST00000587998 DISP3Q9P2K9 1392 aa13.63□□□□□ -0.23
LINC00906-202ENST00000587998 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
LINC00906-202ENST00000587998 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
LINC00906-202ENST00000587998 PRG4Q92954 1404 aaPredicted RBP13.59□□□□□ -0.23
LINC00906-202ENST00000587998 MYCNP04198 464 aaPredicted RBP13.59□□□□□ -0.23
LINC00906-202ENST00000587998 JPH4Q96JJ6 628 aa13.56□□□□□ -0.24
LINC00906-202ENST00000587998 POLA2Q14181 598 aa13.55□□□□□ -0.24
LINC00906-202ENST00000587998 COL17A1Q9UMD9 1497 aaPredicted RBP13.55□□□□□ -0.24
LINC00906-202ENST00000587998 CUX1P39880 1505 aa13.52□□□□□ -0.25
LINC00906-202ENST00000587998 ADCY10Q96PN6 1610 aa13.52□□□□□ -0.25
LINC00906-202ENST00000587998 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
LINC00906-202ENST00000587998 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
LINC00906-202ENST00000587998 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
LINC00906-202ENST00000587998 TOP2BQ02880 1626 aa13.48□□□□□ -0.25
LINC00906-202ENST00000587998 PPRC1Q5VV67 1664 aaKnown RBP13.47□□□□□ -0.25
LINC00906-202ENST00000587998 ADAMTS12P58397 1594 aa13.47□□□□□ -0.25
LINC00906-202ENST00000587998 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
LINC00906-202ENST00000587998 FHAD1B1AJZ9 1412 aa13.46□□□□□ -0.26
LINC00906-202ENST00000587998 GLI2P10070 1586 aa13.43□□□□□ -0.26
LINC00906-202ENST00000587998 CERKQ8TCT0 537 aa13.43□□□□□ -0.26
LINC00906-202ENST00000587998 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
LINC00906-202ENST00000587998 FOXD4L1Q9NU39 408 aa13.38□□□□□ -0.27
LINC00906-202ENST00000587998 PLB1Q6P1J6 1458 aa13.36□□□□□ -0.27
LINC00906-202ENST00000587998 ASXL2Q76L83 1435 aa13.36□□□□□ -0.27
LINC00906-202ENST00000587998 SPATA31D1Q6ZQQ2 1576 aa13.36□□□□□ -0.27
LINC00906-202ENST00000587998 TEX14Q8IWB6 1497 aa13.33□□□□□ -0.28
LINC00906-202ENST00000587998 PTPRMP28827 1452 aa13.32□□□□□ -0.28
LINC00906-202ENST00000587998 PCF11O94913 1555 aaKnown RBP13.31□□□□□ -0.28
LINC00906-202ENST00000587998 ABCC2Q92887 1545 aa13.3□□□□□ -0.28
LINC00906-202ENST00000587998 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
LINC00906-202ENST00000587998 RUSC2Q8N2Y8 1516 aa13.29□□□□□ -0.28
LINC00906-202ENST00000587998 ZBTB22O15209 634 aa13.28□□□□□ -0.28
LINC00906-202ENST00000587998 EPRSP07814 1512 aaKnown RBP13.28□□□□□ -0.28
LINC00906-202ENST00000587998 MAP3K4Q9Y6R4 1608 aa13.28□□□□□ -0.28
LINC00906-202ENST00000587998 PTPRGP23470 1445 aa13.27□□□□□ -0.29
LINC00906-202ENST00000587998 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
LINC00906-202ENST00000587998 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
LINC00906-202ENST00000587998 ADAMTSL3P82987 1691 aa13.22□□□□□ -0.29
LINC00906-202ENST00000587998 HSPA2P54652 639 aa13.22□□□□□ -0.29
LINC00906-202ENST00000587998 KIAA0586Q9BVV6 1533 aa13.21□□□□□ -0.29
LINC00906-202ENST00000587998 KIF21BO75037 1637 aa13.21□□□□□ -0.3
LINC00906-202ENST00000587998 UHRF1BP1LA0JNW5 1464 aa13.19□□□□□ -0.3
LINC00906-202ENST00000587998 TNIKQ9UKE5 1360 aa13.17□□□□□ -0.3
LINC00906-202ENST00000587998 TTBK1Q5TCY1 1321 aaPredicted RBP13.14□□□□□ -0.31
LINC00906-202ENST00000587998 MAGI3Q5TCQ9 1506 aa13.14□□□□□ -0.31
LINC00906-202ENST00000587998 CUL7Q14999 1698 aa13.14□□□□□ -0.31
LINC00906-202ENST00000587998 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
LINC00906-202ENST00000587998 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
LINC00906-202ENST00000587998 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
LINC00906-202ENST00000587998 CD109Q6YHK3 1445 aa13.1□□□□□ -0.31
LINC00906-202ENST00000587998 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
LINC00906-202ENST00000587998 CARMIL2Q6F5E8 1435 aa13.08□□□□□ -0.32
LINC00906-202ENST00000587998 MADDQ8WXG6 1647 aa13.07□□□□□ -0.32
LINC00906-202ENST00000587998 BCORL1Q5H9F3 1711 aa13.07□□□□□ -0.32
LINC00906-202ENST00000587998 ARAP3Q8WWN8 1544 aa13.07□□□□□ -0.32
LINC00906-202ENST00000587998 WDR7Q9Y4E6 1490 aa13.05□□□□□ -0.32
LINC00906-202ENST00000587998 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
LINC00906-202ENST00000587998 ZCCHC11Q5TAX3 1644 aaKnown RBP13.02□□□□□ -0.32
LINC00906-202ENST00000587998 ARID4BQ4LE39 1312 aaPredicted RBP13.02□□□□□ -0.33
LINC00906-202ENST00000587998 YEATS2Q9ULM3 1422 aa13.01□□□□□ -0.33
LINC00906-202ENST00000587998 BIVM-ERCC5R4GMW8 1640 aa13.01□□□□□ -0.33
LINC00906-202ENST00000587998 CFAP43Q8NDM7 1665 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms