RNA–Protein interactions for RNA: ENST00000587518.5

GRN-209, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-209ENST00000587518 CEP162Q5TB80 1403 aa24.29■■□□□ 1.48
GRN-209ENST00000587518 FBLN2P98095 1184 aa24.28■■□□□ 1.48
GRN-209ENST00000587518 CHD1O14646 1710 aa24.21■■□□□ 1.47
GRN-209ENST00000587518 RANGAP1P46060 587 aaPredicted RBP24.21■■□□□ 1.47
GRN-209ENST00000587518 CLIP1P30622 1438 aa24.19■■□□□ 1.46
GRN-209ENST00000587518 IQGAP2Q13576 1575 aa24.15■■□□□ 1.46
GRN-209ENST00000587518 CEP170Q5SW79 1584 aa24.15■■□□□ 1.46
GRN-209ENST00000587518 NUP160Q12769 1436 aa24.1■■□□□ 1.45
GRN-209ENST00000587518 KIAA0586Q9BVV6 1533 aa24.1■■□□□ 1.45
GRN-209ENST00000587518 EFCAB5A4FU69 1503 aa24.07■■□□□ 1.44
GRN-209ENST00000587518 ARHGAP35Q9NRY4 1499 aa24.03■■□□□ 1.44
GRN-209ENST00000587518 UGGT2Q9NYU1 1516 aa23.99■■□□□ 1.43
GRN-209ENST00000587518 SAMD9Q5K651 1589 aa23.99■■□□□ 1.43
GRN-209ENST00000587518 ARAP1Q96P48 1450 aa23.98■■□□□ 1.43
GRN-209ENST00000587518 RIMBP3CA6NJZ7 1639 aa23.98■■□□□ 1.43
GRN-209ENST00000587518 RIMBP3BA6NNM3 1639 aa23.98■■□□□ 1.43
GRN-209ENST00000587518 RIMBP3Q9UFD9 1639 aa23.98■■□□□ 1.43
GRN-209ENST00000587518 ARHGEF11O15085 1522 aa23.94■■□□□ 1.42
GRN-209ENST00000587518 VPS8Q8N3P4 1428 aa23.93■■□□□ 1.42
GRN-209ENST00000587518 P3H3Q8IVL6 736 aa23.92■■□□□ 1.42
GRN-209ENST00000587518 FHOD3Q2V2M9 1422 aa23.92■■□□□ 1.42
GRN-209ENST00000587518 CLASP1Q7Z460 1538 aa23.9■■□□□ 1.42
GRN-209ENST00000587518 KIAA0556O60303 1618 aa23.9■■□□□ 1.42
GRN-209ENST00000587518 CARMIL2Q6F5E8 1435 aa23.87■■□□□ 1.41
GRN-209ENST00000587518 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
GRN-209ENST00000587518 DISP1Q96F81 1524 aa23.84■■□□□ 1.41
GRN-209ENST00000587518 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
GRN-209ENST00000587518 FMN1Q68DA7 1419 aa23.82■■□□□ 1.4
GRN-209ENST00000587518 PRG4Q92954 1404 aaPredicted RBP23.81■■□□□ 1.4
GRN-209ENST00000587518 PCF11O94913 1555 aaKnown RBP23.78■■□□□ 1.4
GRN-209ENST00000587518 APLP2Q06481 763 aa23.75■■□□□ 1.39
GRN-209ENST00000587518 CYB5RLQ6IPT4 315 aa23.75■■□□□ 1.39
GRN-209ENST00000587518 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
GRN-209ENST00000587518 FYCO1Q9BQS8 1478 aa23.73■■□□□ 1.39
GRN-209ENST00000587518 CASKIN1Q8WXD9 1431 aa23.7■■□□□ 1.38
GRN-209ENST00000587518 ATP1B4Q9UN42 357 aaPredicted RBP23.7■■□□□ 1.38
GRN-209ENST00000587518 HECW1Q76N89 1606 aa23.67■■□□□ 1.38
GRN-209ENST00000587518 ERCC6L2Q5T890 1561 aa23.66■■□□□ 1.38
GRN-209ENST00000587518 RAPGEF6Q8TEU7 1601 aa23.63■■□□□ 1.37
GRN-209ENST00000587518 PTPRGP23470 1445 aa23.62■■□□□ 1.37
GRN-209ENST00000587518 CFAP43Q8NDM7 1665 aa23.6■■□□□ 1.37
GRN-209ENST00000587518 TIAM1Q13009 1591 aa23.58■■□□□ 1.37
GRN-209ENST00000587518 PPARGC1BQ86YN6 1023 aaKnown RBP23.57■■□□□ 1.36
GRN-209ENST00000587518 CCDC18Q5T9S5 1454 aa23.56■■□□□ 1.36
GRN-209ENST00000587518 PLB1Q6P1J6 1458 aa23.56■■□□□ 1.36
GRN-209ENST00000587518 MAP3K1Q13233 1512 aa23.55■■□□□ 1.36
GRN-209ENST00000587518 ABCA8O94911 1581 aa23.55■■□□□ 1.36
GRN-209ENST00000587518 LRRIQ1Q96JM4 1722 aa23.52■■□□□ 1.36
GRN-209ENST00000587518 EPRSP07814 1512 aaKnown RBP23.5■■□□□ 1.35
GRN-209ENST00000587518 NUP153P49790 1475 aaKnown RBP23.49■■□□□ 1.35
GRN-209ENST00000587518 UACAQ9BZF9 1416 aa23.49■■□□□ 1.35
GRN-209ENST00000587518 CDK13Q14004 1512 aaKnown RBP23.48■■□□□ 1.35
GRN-209ENST00000587518 ARID3CA6NKF2 412 aa23.47■■□□□ 1.35
GRN-209ENST00000587518 ABCC2Q92887 1545 aa23.45■■□□□ 1.34
GRN-209ENST00000587518 LRRC9Q6ZRR7 1453 aa23.44■■□□□ 1.34
GRN-209ENST00000587518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
GRN-209ENST00000587518 TRHP20396 242 aaPredicted RBP23.44■■□□□ 1.34
GRN-209ENST00000587518 HNRNPUL2Q1KMD3 747 aaKnown RBP23.44■■□□□ 1.34
GRN-209ENST00000587518 MTUS2Q5JR59 1369 aa23.42■■□□□ 1.34
GRN-209ENST00000587518 KANK4Q5T7N3 995 aaPredicted RBP23.41■■□□□ 1.34
GRN-209ENST00000587518 EHBP1L1Q8N3D4 1523 aa23.41■■□□□ 1.34
GRN-209ENST00000587518 UHRF1BP1LA0JNW5 1464 aa23.38■■□□□ 1.33
GRN-209ENST00000587518 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
GRN-209ENST00000587518 ATP10BO94823 1461 aa23.34■■□□□ 1.33
GRN-209ENST00000587518 ADCY10Q96PN6 1610 aa23.33■■□□□ 1.33
GRN-209ENST00000587518 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
GRN-209ENST00000587518 MAGI3Q5TCQ9 1506 aa23.31■■□□□ 1.32
GRN-209ENST00000587518 ZCCHC11Q5TAX3 1644 aaKnown RBP23.3■■□□□ 1.32
GRN-209ENST00000587518 TRIM26Q12899 539 aaPredicted RBP23.3■■□□□ 1.32
GRN-209ENST00000587518 TROQ12816 1431 aaPredicted RBP23.27■■□□□ 1.32
GRN-209ENST00000587518 KDM5BQ9UGL1 1544 aa23.27■■□□□ 1.32
GRN-209ENST00000587518 PLEKHD1A6NEE1 506 aa23.25■■□□□ 1.31
GRN-209ENST00000587518 NCOA2Q15596 1464 aa23.24■■□□□ 1.31
GRN-209ENST00000587518 KIF14Q15058 1648 aa23.22■■□□□ 1.31
GRN-209ENST00000587518 NPM1P06748 294 aaKnown RBP eCLIP23.21■■□□□ 1.31
GRN-209ENST00000587518 PHLDB1Q86UU1 1377 aa23.17■■□□□ 1.3
GRN-209ENST00000587518 PCGF6Q9BYE7 350 aa23.17■■□□□ 1.3
GRN-209ENST00000587518 MYOM3Q5VTT5 1437 aa23.12■■□□□ 1.29
GRN-209ENST00000587518 CCNB3Q8WWL7 1395 aa23.12■■□□□ 1.29
GRN-209ENST00000587518 WDR7Q9Y4E6 1490 aa23.11■■□□□ 1.29
GRN-209ENST00000587518 RRBP1Q9P2E9 1410 aaKnown RBP23.11■■□□□ 1.29
GRN-209ENST00000587518 ITSN2Q9NZM3 1697 aa23.11■■□□□ 1.29
GRN-209ENST00000587518 FGD6Q6ZV73 1430 aa23.08■■□□□ 1.29
GRN-209ENST00000587518 ASXL2Q76L83 1435 aa23.08■■□□□ 1.28
GRN-209ENST00000587518 KCNH8Q96L42 1107 aa23.05■■□□□ 1.28
GRN-209ENST00000587518 ABCC10Q5T3U5 1492 aa23.05■■□□□ 1.28
GRN-209ENST00000587518 FAM50AQ14320 339 aaKnown RBP23.03■■□□□ 1.28
GRN-209ENST00000587518 PTPN23Q9H3S7 1636 aa23.03■■□□□ 1.28
GRN-209ENST00000587518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.03■■□□□ 1.28
GRN-209ENST00000587518 TTC37Q6PGP7 1564 aa23.02■■□□□ 1.28
GRN-209ENST00000587518 MIA2Q96PC5 1412 aa23.01■■□□□ 1.27
GRN-209ENST00000587518 MAPKBP1O60336 1514 aa23.01■■□□□ 1.27
GRN-209ENST00000587518 CDC42BPAQ5VT25 1732 aa23■■□□□ 1.27
GRN-209ENST00000587518 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
GRN-209ENST00000587518 GPATCH8Q9UKJ3 1502 aaKnown RBP22.99■■□□□ 1.27
GRN-209ENST00000587518 PREX2Q70Z35 1606 aa22.98■■□□□ 1.27
GRN-209ENST00000587518 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
GRN-209ENST00000587518 CFDP1Q9UEE9 299 aaPredicted RBP22.96■■□□□ 1.27
GRN-209ENST00000587518 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
GRN-209ENST00000587518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.95■■□□□ 1.264e-11■■■■■ 30.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms