RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
GHDC-207ENST00000587427 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
GHDC-207ENST00000587427 UBTFP17480 764 aaKnown RBP23.85■■□□□ 1.41
GHDC-207ENST00000587427 FBLN2P98095 1184 aa23.84■■□□□ 1.41
GHDC-207ENST00000587427 IGF1RP08069 1367 aa23.84■■□□□ 1.41
GHDC-207ENST00000587427 MIER1Q8N108 512 aa23.8■■□□□ 1.4
GHDC-207ENST00000587427 ERICH3Q5RHP9 1530 aa23.76■■□□□ 1.39
GHDC-207ENST00000587427 CHMP7Q8WUX9 453 aaPredicted RBP23.72■■□□□ 1.39
GHDC-207ENST00000587427 MAGI1Q96QZ7 1491 aaPredicted RBP23.72■■□□□ 1.39
GHDC-207ENST00000587427 ADAMTS12P58397 1594 aa23.7■■□□□ 1.38
GHDC-207ENST00000587427 CARMIL1Q5VZK9 1371 aa23.7■■□□□ 1.38
GHDC-207ENST00000587427 KIF21BO75037 1637 aa23.68■■□□□ 1.38
GHDC-207ENST00000587427 CHD1O14646 1710 aa23.67■■□□□ 1.38
GHDC-207ENST00000587427 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
GHDC-207ENST00000587427 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
GHDC-207ENST00000587427 HNRNPUL2Q1KMD3 747 aaKnown RBP23.65■■□□□ 1.38
GHDC-207ENST00000587427 CLIP1P30622 1438 aa23.62■■□□□ 1.37
GHDC-207ENST00000587427 CUL7Q14999 1698 aa23.61■■□□□ 1.37
GHDC-207ENST00000587427 VPS8Q8N3P4 1428 aa23.61■■□□□ 1.37
GHDC-207ENST00000587427 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
GHDC-207ENST00000587427 PRXQ9BXM0 1461 aa23.59■■□□□ 1.37
GHDC-207ENST00000587427 RAPGEF2Q9Y4G8 1499 aa23.58■■□□□ 1.37
GHDC-207ENST00000587427 OSCARQ8IYS5 282 aa23.54■■□□□ 1.36
GHDC-207ENST00000587427 CEP170Q5SW79 1584 aa23.51■■□□□ 1.35
GHDC-207ENST00000587427 CLSPNQ9HAW4 1339 aa23.47■■□□□ 1.35
GHDC-207ENST00000587427 APLP2Q06481 763 aa23.46■■□□□ 1.35
GHDC-207ENST00000587427 NUP160Q12769 1436 aa23.44■■□□□ 1.34
GHDC-207ENST00000587427 RANGAP1P46060 587 aaPredicted RBP23.43■■□□□ 1.34
GHDC-207ENST00000587427 CLASP1Q7Z460 1538 aa23.36■■□□□ 1.33
GHDC-207ENST00000587427 DHX57Q6P158 1386 aaKnown RBP23.33■■□□□ 1.33
GHDC-207ENST00000587427 KIAA0586Q9BVV6 1533 aa23.31■■□□□ 1.32
GHDC-207ENST00000587427 JPH4Q96JJ6 628 aa23.3■■□□□ 1.32
GHDC-207ENST00000587427 SUPT16HQ9Y5B9 1047 aaKnown RBP23.29■■□□□ 1.32
GHDC-207ENST00000587427 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
GHDC-207ENST00000587427 IQGAP2Q13576 1575 aa23.27■■□□□ 1.32
GHDC-207ENST00000587427 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
GHDC-207ENST00000587427 P3H3Q8IVL6 736 aa23.22■■□□□ 1.31
GHDC-207ENST00000587427 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
GHDC-207ENST00000587427 PRG4Q92954 1404 aaPredicted RBP23.21■■□□□ 1.31
GHDC-207ENST00000587427 ARAP1Q96P48 1450 aa23.19■■□□□ 1.3
GHDC-207ENST00000587427 SHROOM2Q13796 1616 aa23.18■■□□□ 1.3
GHDC-207ENST00000587427 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
GHDC-207ENST00000587427 ARHGEF11O15085 1522 aa23.16■■□□□ 1.3
GHDC-207ENST00000587427 DISP1Q96F81 1524 aa23.13■■□□□ 1.29
GHDC-207ENST00000587427 UGGT2Q9NYU1 1516 aa23.12■■□□□ 1.29
GHDC-207ENST00000587427 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
GHDC-207ENST00000587427 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
GHDC-207ENST00000587427 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
GHDC-207ENST00000587427 TSHZ2Q9NRE2 1034 aa23.11■■□□□ 1.29
GHDC-207ENST00000587427 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
GHDC-207ENST00000587427 KIAA0556O60303 1618 aa23.06■■□□□ 1.28
GHDC-207ENST00000587427 CYB5RLQ6IPT4 315 aa23.05■■□□□ 1.28
GHDC-207ENST00000587427 FHOD3Q2V2M9 1422 aa23.05■■□□□ 1.28
GHDC-207ENST00000587427 ARHGAP35Q9NRY4 1499 aa23.04■■□□□ 1.28
GHDC-207ENST00000587427 CARMIL2Q6F5E8 1435 aa23.03■■□□□ 1.28
GHDC-207ENST00000587427 SAMD9Q5K651 1589 aa23.02■■□□□ 1.27
GHDC-207ENST00000587427 CCNB3Q8WWL7 1395 aa23■■□□□ 1.27
GHDC-207ENST00000587427 KCNH8Q96L42 1107 aa22.97■■□□□ 1.27
GHDC-207ENST00000587427 ANP32EQ9BTT0 268 aa22.96■■□□□ 1.27
GHDC-207ENST00000587427 PTPRGP23470 1445 aa22.96■■□□□ 1.27
GHDC-207ENST00000587427 EFCAB5A4FU69 1503 aa22.93■■□□□ 1.26
GHDC-207ENST00000587427 ARID3CA6NKF2 412 aa22.92■■□□□ 1.26
GHDC-207ENST00000587427 PLB1Q6P1J6 1458 aa22.9■■□□□ 1.26
GHDC-207ENST00000587427 BCANQ96GW7 911 aa22.86■■□□□ 1.25
GHDC-207ENST00000587427 MAPKBP1O60336 1514 aa22.86■■□□□ 1.25
GHDC-207ENST00000587427 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
GHDC-207ENST00000587427 RAB3GAP2Q9H2M9 1393 aa22.84■■□□□ 1.25
GHDC-207ENST00000587427 MAP3K1Q13233 1512 aa22.82■■□□□ 1.24
GHDC-207ENST00000587427 ITGAEP38570 1179 aa22.81■■□□□ 1.24
GHDC-207ENST00000587427 ADCY10Q96PN6 1610 aa22.79■■□□□ 1.24
GHDC-207ENST00000587427 UACAQ9BZF9 1416 aa22.79■■□□□ 1.24
GHDC-207ENST00000587427 FKBP8Q14318 412 aa22.76■■□□□ 1.23
GHDC-207ENST00000587427 FMN1Q68DA7 1419 aa22.76■■□□□ 1.23
GHDC-207ENST00000587427 ABCA8O94911 1581 aa22.75■■□□□ 1.23
GHDC-207ENST00000587427 SETD5Q9C0A6 1442 aa22.75■■□□□ 1.23
GHDC-207ENST00000587427 PCF11O94913 1555 aaKnown RBP22.74■■□□□ 1.23
GHDC-207ENST00000587427 TIAM1Q13009 1591 aa22.74■■□□□ 1.23
GHDC-207ENST00000587427 RAPGEF6Q8TEU7 1601 aa22.73■■□□□ 1.23
GHDC-207ENST00000587427 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
GHDC-207ENST00000587427 NUP153P49790 1475 aaKnown RBP22.71■■□□□ 1.23
GHDC-207ENST00000587427 DDX10Q13206 875 aaKnown RBP22.69■■□□□ 1.22
GHDC-207ENST00000587427 TIMELESSQ9UNS1 1208 aa22.69■■□□□ 1.22
GHDC-207ENST00000587427 BCL11AQ9H165 835 aa22.68■■□□□ 1.22
GHDC-207ENST00000587427 CDK13Q14004 1512 aaKnown RBP22.67■■□□□ 1.22
GHDC-207ENST00000587427 PPP1R15AO75807 674 aaPredicted RBP22.66■■□□□ 1.22
GHDC-207ENST00000587427 LRRC9Q6ZRR7 1453 aa22.66■■□□□ 1.22
GHDC-207ENST00000587427 UHRF1BP1LA0JNW5 1464 aa22.65■■□□□ 1.22
GHDC-207ENST00000587427 CASKIN1Q8WXD9 1431 aa22.65■■□□□ 1.22
GHDC-207ENST00000587427 LRRIQ1Q96JM4 1722 aa22.65■■□□□ 1.22
GHDC-207ENST00000587427 ATP10BO94823 1461 aa22.64■■□□□ 1.22
GHDC-207ENST00000587427 NPM1P06748 294 aaKnown RBP eCLIP22.62■■□□□ 1.21
GHDC-207ENST00000587427 ZCCHC11Q5TAX3 1644 aaKnown RBP22.62■■□□□ 1.21
GHDC-207ENST00000587427 PHLDB1Q86UU1 1377 aa22.62■■□□□ 1.21
GHDC-207ENST00000587427 CCER2I3L3R5 266 aa22.61■■□□□ 1.21
GHDC-207ENST00000587427 KDM5BQ9UGL1 1544 aa22.61■■□□□ 1.21
GHDC-207ENST00000587427 EPRSP07814 1512 aaKnown RBP22.6■■□□□ 1.21
GHDC-207ENST00000587427 HECW1Q76N89 1606 aa22.6■■□□□ 1.21
GHDC-207ENST00000587427 RBM19Q9Y4C8 960 aaKnown RBP22.6■■□□□ 1.21
GHDC-207ENST00000587427 FYCO1Q9BQS8 1478 aa22.6■■□□□ 1.21
GHDC-207ENST00000587427 SIN3AQ96ST3 1273 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms