RNA–Protein interactions for RNA: ENST00000587424.2

SRSF8-201, Transcript of serine and arginine rich splicing factor 8, humanhuman

APPRIS P1 BASIC

Gene SRSF8, Length 4,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF8-201ENST00000587424 NPM2Q86SE8 214 aaKnown RBP20.53■□□□□ 0.88
SRSF8-201ENST00000587424 CLSPNQ9HAW4 1339 aa20.5■□□□□ 0.87
SRSF8-201ENST00000587424 RTL5Q5HYW3 569 aaPredicted RBP20.5■□□□□ 0.87
SRSF8-201ENST00000587424 TOP2AP11388 1531 aaKnown RBP20.45■□□□□ 0.86
SRSF8-201ENST00000587424 CUX2O14529 1486 aa20.44■□□□□ 0.86
SRSF8-201ENST00000587424 EIF4G2P78344 907 aaKnown RBP eCLIP20.42■□□□□ 0.86
SRSF8-201ENST00000587424 FOXD1Q16676 465 aa20.42■□□□□ 0.86
SRSF8-201ENST00000587424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.861e-7■□□□□ 10.1
SRSF8-201ENST00000587424 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
SRSF8-201ENST00000587424 RAB3GAP2Q9H2M9 1393 aa20.41■□□□□ 0.86
SRSF8-201ENST00000587424 NBR1Q14596 966 aa20.38■□□□□ 0.85
SRSF8-201ENST00000587424 TMC1Q8TDI8 760 aa20.37■□□□□ 0.85
SRSF8-201ENST00000587424 BCL11AQ9H165 835 aa20.37■□□□□ 0.85
SRSF8-201ENST00000587424 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
SRSF8-201ENST00000587424 CCDC136Q96JN2 1154 aa20.33■□□□□ 0.85
SRSF8-201ENST00000587424 RGL3Q3MIN7 710 aa20.3■□□□□ 0.84
SRSF8-201ENST00000587424 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
SRSF8-201ENST00000587424 SENP3Q9H4L4 574 aaPredicted RBP20.28■□□□□ 0.84
SRSF8-201ENST00000587424 B4GALNT3Q6L9W6 998 aa20.27■□□□□ 0.83
SRSF8-201ENST00000587424 SETD5Q9C0A6 1442 aa20.27■□□□□ 0.83
SRSF8-201ENST00000587424 ANP32AP39687 249 aaKnown RBP20.26■□□□□ 0.83
SRSF8-201ENST00000587424 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
SRSF8-201ENST00000587424 TSHZ2Q9NRE2 1034 aa20.24■□□□□ 0.83
SRSF8-201ENST00000587424 ATAD2BQ9ULI0 1458 aa20.23■□□□□ 0.83
SRSF8-201ENST00000587424 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
SRSF8-201ENST00000587424 ANP32EQ9BTT0 268 aa20.22■□□□□ 0.83
SRSF8-201ENST00000587424 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
SRSF8-201ENST00000587424 PPP1R15AO75807 674 aaPredicted RBP20.2■□□□□ 0.82
SRSF8-201ENST00000587424 TSPY4P0CV99 314 aa20.2■□□□□ 0.82
SRSF8-201ENST00000587424 TSPY10P0CW01 314 aa20.2■□□□□ 0.82
SRSF8-201ENST00000587424 HSPA5P11021 654 aaKnown RBP20.19■□□□□ 0.82
SRSF8-201ENST00000587424 FHOD3Q2V2M9 1422 aa20.18■□□□□ 0.82
SRSF8-201ENST00000587424 CHGAP10645 457 aaKnown RBP20.18■□□□□ 0.82
SRSF8-201ENST00000587424 CFDP1Q9UEE9 299 aaPredicted RBP20.17■□□□□ 0.82
SRSF8-201ENST00000587424 RBM19Q9Y4C8 960 aaKnown RBP20.16■□□□□ 0.82
SRSF8-201ENST00000587424 CANXP27824 592 aaKnown RBP20.15■□□□□ 0.82
SRSF8-201ENST00000587424 FHAD1B1AJZ9 1412 aa20.12■□□□□ 0.81
SRSF8-201ENST00000587424 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
SRSF8-201ENST00000587424 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
SRSF8-201ENST00000587424 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
SRSF8-201ENST00000587424 ZBTB47Q9UFB7 747 aaPredicted RBP20.05■□□□□ 0.8
SRSF8-201ENST00000587424 L3MBTL2Q969R5 705 aa20.04■□□□□ 0.8
SRSF8-201ENST00000587424 PLEKHD1A6NEE1 506 aa20.03■□□□□ 0.8
SRSF8-201ENST00000587424 KIF21BO75037 1637 aa20.02■□□□□ 0.8
SRSF8-201ENST00000587424 CCER2I3L3R5 266 aa20.02■□□□□ 0.8
SRSF8-201ENST00000587424 MPHOSPH9Q99550 1183 aa20.01■□□□□ 0.79
SRSF8-201ENST00000587424 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
SRSF8-201ENST00000587424 PPP4R2Q9NY27 417 aa19.99■□□□□ 0.79
SRSF8-201ENST00000587424 DCAF11Q8TEB1 546 aa19.98■□□□□ 0.79
SRSF8-201ENST00000587424 TIMELESSQ9UNS1 1208 aa19.98■□□□□ 0.79
SRSF8-201ENST00000587424 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
SRSF8-201ENST00000587424 CC2D1BQ5T0F9 858 aaKnown RBP19.97■□□□□ 0.79
SRSF8-201ENST00000587424 IGF1RP08069 1367 aa19.97■□□□□ 0.79
SRSF8-201ENST00000587424 PHLDB1Q86UU1 1377 aa19.96■□□□□ 0.79
SRSF8-201ENST00000587424 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
SRSF8-201ENST00000587424 ARXQ96QS3 562 aa19.94■□□□□ 0.78
SRSF8-201ENST00000587424 PKD2Q13563 968 aa19.94■□□□□ 0.78
SRSF8-201ENST00000587424 WDR43Q15061 677 aaKnown RBP eCLIP19.93■□□□□ 0.78
SRSF8-201ENST00000587424 LAS1LQ9Y4W2 734 aaKnown RBP19.89■□□□□ 0.77
SRSF8-201ENST00000587424 NEUROD2Q15784 382 aa19.87■□□□□ 0.77
SRSF8-201ENST00000587424 RAD54L2Q9Y4B4 1467 aa19.84■□□□□ 0.77
SRSF8-201ENST00000587424 TNNT2P45379 298 aaPredicted RBP19.83■□□□□ 0.77
SRSF8-201ENST00000587424 FMN1Q68DA7 1419 aa19.81■□□□□ 0.76
SRSF8-201ENST00000587424 SLC24A1O60721 1099 aa19.81■□□□□ 0.76
SRSF8-201ENST00000587424 ZNF644Q9H582 1327 aaPredicted RBP19.8■□□□□ 0.76
SRSF8-201ENST00000587424 RGS3P49796 1198 aa19.8■□□□□ 0.76
SRSF8-201ENST00000587424 RTN4Q9NQC3 1192 aaKnown RBP19.79■□□□□ 0.76
SRSF8-201ENST00000587424 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
SRSF8-201ENST00000587424 EIF5BO60841 1220 aaKnown RBP19.77■□□□□ 0.76
SRSF8-201ENST00000587424 FGD5Q6ZNL6 1462 aa19.77■□□□□ 0.75
SRSF8-201ENST00000587424 NOP58Q9Y2X3 529 aaKnown RBP19.75■□□□□ 0.75
SRSF8-201ENST00000587424 PRKRIP1Q9H875 184 aaPredicted RBP19.75■□□□□ 0.75
SRSF8-201ENST00000587424 KNSTRNQ9Y448 316 aa19.75■□□□□ 0.75
SRSF8-201ENST00000587424 NUP155O75694 1391 aa19.73■□□□□ 0.75
SRSF8-201ENST00000587424 CCDC18Q5T9S5 1454 aa19.72■□□□□ 0.75
SRSF8-201ENST00000587424 HNRNPMP52272 730 aaKnown RBP eCLIP19.72■□□□□ 0.75
SRSF8-201ENST00000587424 CCDC184Q52MB2 194 aa19.71■□□□□ 0.75
SRSF8-201ENST00000587424 FANCD2Q9BXW9 1451 aa19.71■□□□□ 0.75
SRSF8-201ENST00000587424 PRXQ9BXM0 1461 aa19.7■□□□□ 0.74
SRSF8-201ENST00000587424 LRRC9Q6ZRR7 1453 aa19.69■□□□□ 0.74
SRSF8-201ENST00000587424 ST20-MTHFSA0A0A6YYL1 179 aa19.69■□□□□ 0.74
SRSF8-201ENST00000587424 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.68■□□□□ 0.74
SRSF8-201ENST00000587424 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
SRSF8-201ENST00000587424 RRBP1Q9P2E9 1410 aaKnown RBP19.67■□□□□ 0.74
SRSF8-201ENST00000587424 STAG3Q9UJ98 1225 aa19.67■□□□□ 0.74
SRSF8-201ENST00000587424 FRAT1Q92837 279 aaPredicted RBP19.66■□□□□ 0.74
SRSF8-201ENST00000587424 NEFMP07197 916 aa19.65■□□□□ 0.74
SRSF8-201ENST00000587424 DEKP35659 375 aaKnown RBP19.65■□□□□ 0.74
SRSF8-201ENST00000587424 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
SRSF8-201ENST00000587424 PLIN1O60240 522 aa19.62■□□□□ 0.73
SRSF8-201ENST00000587424 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
SRSF8-201ENST00000587424 CUX1P39880 1505 aa19.61■□□□□ 0.73
SRSF8-201ENST00000587424 NUDCQ9Y266 331 aa19.6■□□□□ 0.73
SRSF8-201ENST00000587424 PPM1GO15355 546 aaPredicted RBP19.6■□□□□ 0.73
SRSF8-201ENST00000587424 SAFB2Q14151 953 aaKnown RBP eCLIP19.59■□□□□ 0.73
SRSF8-201ENST00000587424 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
SRSF8-201ENST00000587424 NPM1P06748 294 aaKnown RBP eCLIP19.59■□□□□ 0.73
SRSF8-201ENST00000587424 UPF2Q9HAU5 1272 aaKnown RBP19.58■□□□□ 0.73
SRSF8-201ENST00000587424 WDR97A6NE52 1622 aa19.58■□□□□ 0.73
SRSF8-201ENST00000587424 ROCK2O75116 1388 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms