RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 CEP170Q5SW79 1584 aa19.13■□□□□ 0.65
DNMT1-211ENST00000586988 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
DNMT1-211ENST00000586988 EHMT2Q96KQ7 1210 aa19.11■□□□□ 0.65
DNMT1-211ENST00000586988 IQGAP2Q13576 1575 aa19.09■□□□□ 0.65
DNMT1-211ENST00000586988 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.64
DNMT1-211ENST00000586988 KIAA0586Q9BVV6 1533 aa19.08■□□□□ 0.64
DNMT1-211ENST00000586988 CLASP1Q7Z460 1538 aa19.02■□□□□ 0.64
DNMT1-211ENST00000586988 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
DNMT1-211ENST00000586988 EFCAB5A4FU69 1503 aa18.99■□□□□ 0.63
DNMT1-211ENST00000586988 CEP162Q5TB80 1403 aa18.99■□□□□ 0.63
DNMT1-211ENST00000586988 UGGT2Q9NYU1 1516 aa18.98■□□□□ 0.63
DNMT1-211ENST00000586988 OSCARQ8IYS5 282 aa18.96■□□□□ 0.63
DNMT1-211ENST00000586988 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
DNMT1-211ENST00000586988 CLIP1P30622 1438 aa18.94■□□□□ 0.62
DNMT1-211ENST00000586988 SAMD9Q5K651 1589 aa18.93■□□□□ 0.62
DNMT1-211ENST00000586988 KIAA0556O60303 1618 aa18.89■□□□□ 0.62
DNMT1-211ENST00000586988 CARMIL2Q6F5E8 1435 aa18.88■□□□□ 0.61
DNMT1-211ENST00000586988 ARHGAP35Q9NRY4 1499 aa18.88■□□□□ 0.61
DNMT1-211ENST00000586988 JPH4Q96JJ6 628 aa18.87■□□□□ 0.61
DNMT1-211ENST00000586988 DISP1Q96F81 1524 aa18.86■□□□□ 0.61
DNMT1-211ENST00000586988 RANGAP1P46060 587 aaPredicted RBP18.86■□□□□ 0.61
DNMT1-211ENST00000586988 PRG4Q92954 1404 aaPredicted RBP18.84■□□□□ 0.61
DNMT1-211ENST00000586988 ARAP1Q96P48 1450 aa18.8■□□□□ 0.6
DNMT1-211ENST00000586988 FHOD3Q2V2M9 1422 aa18.8■□□□□ 0.6
DNMT1-211ENST00000586988 FMN1Q68DA7 1419 aa18.76■□□□□ 0.59
DNMT1-211ENST00000586988 ERCC6L2Q5T890 1561 aa18.75■□□□□ 0.59
DNMT1-211ENST00000586988 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
DNMT1-211ENST00000586988 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
DNMT1-211ENST00000586988 ARHGEF11O15085 1522 aa18.72■□□□□ 0.59
DNMT1-211ENST00000586988 PCF11O94913 1555 aaKnown RBP18.68■□□□□ 0.58
DNMT1-211ENST00000586988 PTPRGP23470 1445 aa18.67■□□□□ 0.58
DNMT1-211ENST00000586988 FYCO1Q9BQS8 1478 aa18.67■□□□□ 0.58
DNMT1-211ENST00000586988 RIMBP3CA6NJZ7 1639 aa18.66■□□□□ 0.58
DNMT1-211ENST00000586988 RIMBP3BA6NNM3 1639 aa18.66■□□□□ 0.58
DNMT1-211ENST00000586988 HECW1Q76N89 1606 aa18.66■□□□□ 0.58
DNMT1-211ENST00000586988 RIMBP3Q9UFD9 1639 aa18.66■□□□□ 0.58
DNMT1-211ENST00000586988 RAPGEF6Q8TEU7 1601 aa18.65■□□□□ 0.58
DNMT1-211ENST00000586988 CASKIN1Q8WXD9 1431 aa18.65■□□□□ 0.58
DNMT1-211ENST00000586988 ABCA8O94911 1581 aa18.63■□□□□ 0.57
DNMT1-211ENST00000586988 PLB1Q6P1J6 1458 aa18.59■□□□□ 0.57
DNMT1-211ENST00000586988 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
DNMT1-211ENST00000586988 TTBK1Q5TCY1 1321 aaPredicted RBP18.59■□□□□ 0.57
DNMT1-211ENST00000586988 ABCC2Q92887 1545 aa18.59■□□□□ 0.57
DNMT1-211ENST00000586988 CCDC18Q5T9S5 1454 aa18.58■□□□□ 0.56
DNMT1-211ENST00000586988 UHRF1BP1LA0JNW5 1464 aa18.57■□□□□ 0.56
DNMT1-211ENST00000586988 CFAP43Q8NDM7 1665 aa18.55■□□□□ 0.56
DNMT1-211ENST00000586988 NUP153P49790 1475 aaKnown RBP18.55■□□□□ 0.56
DNMT1-211ENST00000586988 MAP3K1Q13233 1512 aa18.53■□□□□ 0.56
DNMT1-211ENST00000586988 ADCY10Q96PN6 1610 aa18.52■□□□□ 0.55
DNMT1-211ENST00000586988 TIAM1Q13009 1591 aa18.51■□□□□ 0.55
DNMT1-211ENST00000586988 EPRSP07814 1512 aaKnown RBP18.51■□□□□ 0.55
DNMT1-211ENST00000586988 APLP2Q06481 763 aa18.51■□□□□ 0.55
DNMT1-211ENST00000586988 LRRIQ1Q96JM4 1722 aa18.51■□□□□ 0.55
DNMT1-211ENST00000586988 ATP1B4Q9UN42 357 aaPredicted RBP18.5■□□□□ 0.55
DNMT1-211ENST00000586988 CDK13Q14004 1512 aaKnown RBP18.47■□□□□ 0.55
DNMT1-211ENST00000586988 KDM5BQ9UGL1 1544 aa18.47■□□□□ 0.55
DNMT1-211ENST00000586988 ZCCHC11Q5TAX3 1644 aaKnown RBP18.45■□□□□ 0.54
DNMT1-211ENST00000586988 ATP10BO94823 1461 aa18.43■□□□□ 0.54
DNMT1-211ENST00000586988 CYB5RLQ6IPT4 315 aa18.42■□□□□ 0.54
DNMT1-211ENST00000586988 EHBP1L1Q8N3D4 1523 aa18.42■□□□□ 0.54
DNMT1-211ENST00000586988 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
DNMT1-211ENST00000586988 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.54
DNMT1-211ENST00000586988 ARID3CA6NKF2 412 aa18.38■□□□□ 0.53
DNMT1-211ENST00000586988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.38■□□□□ 0.53
DNMT1-211ENST00000586988 HNRNPUL2Q1KMD3 747 aaKnown RBP18.38■□□□□ 0.53
DNMT1-211ENST00000586988 MTUS2Q5JR59 1369 aa18.38■□□□□ 0.53
DNMT1-211ENST00000586988 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
DNMT1-211ENST00000586988 TROQ12816 1431 aaPredicted RBP18.35■□□□□ 0.53
DNMT1-211ENST00000586988 MAGI3Q5TCQ9 1506 aa18.34■□□□□ 0.53
DNMT1-211ENST00000586988 SUPT6HQ7KZ85 1726 aaKnown RBP18.34■□□□□ 0.53
DNMT1-211ENST00000586988 MAPKBP1O60336 1514 aa18.33■□□□□ 0.53
DNMT1-211ENST00000586988 KIF14Q15058 1648 aa18.33■□□□□ 0.52
DNMT1-211ENST00000586988 WDR7Q9Y4E6 1490 aa18.33■□□□□ 0.52
DNMT1-211ENST00000586988 PLEKHD1A6NEE1 506 aa18.31■□□□□ 0.52
DNMT1-211ENST00000586988 ASXL2Q76L83 1435 aa18.3■□□□□ 0.52
DNMT1-211ENST00000586988 KANK4Q5T7N3 995 aaPredicted RBP18.29■□□□□ 0.52
DNMT1-211ENST00000586988 NCOA2Q15596 1464 aa18.25■□□□□ 0.51
DNMT1-211ENST00000586988 ITSN2Q9NZM3 1697 aa18.22■□□□□ 0.51
DNMT1-211ENST00000586988 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
DNMT1-211ENST00000586988 PPARGC1BQ86YN6 1023 aaKnown RBP18.2■□□□□ 0.5
DNMT1-211ENST00000586988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.19■□□□□ 0.52e-6■□□□□ 8.3
DNMT1-211ENST00000586988 TTC37Q6PGP7 1564 aa18.19■□□□□ 0.5
DNMT1-211ENST00000586988 ABCA9Q8IUA7 1624 aa18.19■□□□□ 0.5
DNMT1-211ENST00000586988 ABCC10Q5T3U5 1492 aa18.19■□□□□ 0.5
DNMT1-211ENST00000586988 MYO5CQ9NQX4 1742 aa18.17■□□□□ 0.5
DNMT1-211ENST00000586988 GLI2P10070 1586 aa18.17■□□□□ 0.5
DNMT1-211ENST00000586988 DIP2BQ9P265 1576 aa18.17■□□□□ 0.5
DNMT1-211ENST00000586988 CCNB3Q8WWL7 1395 aa18.17■□□□□ 0.5
DNMT1-211ENST00000586988 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
DNMT1-211ENST00000586988 PREX2Q70Z35 1606 aa18.16■□□□□ 0.5
DNMT1-211ENST00000586988 PHLDB1Q86UU1 1377 aa18.15■□□□□ 0.5
DNMT1-211ENST00000586988 KCNH8Q96L42 1107 aa18.14■□□□□ 0.49
DNMT1-211ENST00000586988 CDC42BPAQ5VT25 1732 aa18.14■□□□□ 0.49
DNMT1-211ENST00000586988 ARAP3Q8WWN8 1544 aa18.13■□□□□ 0.49
DNMT1-211ENST00000586988 MIA2Q96PC5 1412 aa18.12■□□□□ 0.49
DNMT1-211ENST00000586988 GPATCH8Q9UKJ3 1502 aaKnown RBP18.12■□□□□ 0.49
DNMT1-211ENST00000586988 FGD6Q6ZV73 1430 aa18.11■□□□□ 0.49
DNMT1-211ENST00000586988 MAP3K4Q9Y6R4 1608 aa18.1■□□□□ 0.49
DNMT1-211ENST00000586988 RRBP1Q9P2E9 1410 aaKnown RBP18.09■□□□□ 0.49
DNMT1-211ENST00000586988 CFAP74Q9C0B2 1584 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms