RNA–Protein interactions for RNA: ENST00000585815.5

PRKAR1A-208, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 5

Gene PRKAR1A, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-208	ENST00000585815	EEA1	Q15075	1411 aa		14.04	□□□□□ -0.16
PRKAR1A-208	ENST00000585815	KIAA0586	Q9BVV6	1533 aa		14.04	□□□□□ -0.16
PRKAR1A-208	ENST00000585815	JPH4	Q96JJ6	628 aa		14.03	□□□□□ -0.16
PRKAR1A-208	ENST00000585815	PRG4	Q92954	1404 aa	Predicted RBP	13.99	□□□□□ -0.17
PRKAR1A-208	ENST00000585815	CHIC1	Q5VXU3	224 aa		13.99	□□□□□ -0.17
PRKAR1A-208	ENST00000585815	CSRNP3	Q8WYN3	585 aa		13.97	□□□□□ -0.17
PRKAR1A-208	ENST00000585815	PRX	Q9BXM0	1461 aa		13.96	□□□□□ -0.17
PRKAR1A-208	ENST00000585815	IQGAP2	Q13576	1575 aa		13.96	□□□□□ -0.18
PRKAR1A-208	ENST00000585815	ERCC6L2	Q5T890	1561 aa		13.94	□□□□□ -0.18
PRKAR1A-208	ENST00000585815	CARMIL2	Q6F5E8	1435 aa		13.94	□□□□□ -0.18
PRKAR1A-208	ENST00000585815	CTTNBP2	Q8WZ74	1663 aa		13.92	□□□□□ -0.18
PRKAR1A-208	ENST00000585815	UGGT2	Q9NYU1	1516 aa		13.88	□□□□□ -0.19
PRKAR1A-208	ENST00000585815	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKAR1A-208	ENST00000585815	GOLGA3	Q08378	1498 aa		13.86	□□□□□ -0.19
PRKAR1A-208	ENST00000585815	TNIK	Q9UKE5	1360 aa		13.85	□□□□□ -0.19
PRKAR1A-208	ENST00000585815	PTPRG	P23470	1445 aa		13.84	□□□□□ -0.19
PRKAR1A-208	ENST00000585815	KIF21B	O75037	1637 aa		13.84	□□□□□ -0.19
PRKAR1A-208	ENST00000585815	NPM1	P06748	294 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
PRKAR1A-208	ENST00000585815	DISP1	Q96F81	1524 aa		13.82	□□□□□ -0.2
PRKAR1A-208	ENST00000585815	KIAA0556	O60303	1618 aa		13.82	□□□□□ -0.2
PRKAR1A-208	ENST00000585815	TRH	P20396	242 aa	Predicted RBP	13.81	□□□□□ -0.2
PRKAR1A-208	ENST00000585815	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.78	□□□□□ -0.2
PRKAR1A-208	ENST00000585815	ADCY10	Q96PN6	1610 aa		13.76	□□□□□ -0.21
PRKAR1A-208	ENST00000585815	UACA	Q9BZF9	1416 aa		13.75	□□□□□ -0.21
PRKAR1A-208	ENST00000585815	UHRF1BP1L	A0JNW5	1464 aa		13.74	□□□□□ -0.21
PRKAR1A-208	ENST00000585815	UBTF	P17480	764 aa	Known RBP	13.74	□□□□□ -0.21
PRKAR1A-208	ENST00000585815	MAPKBP1	O60336	1514 aa		13.72	□□□□□ -0.21
PRKAR1A-208	ENST00000585815	ABCC2	Q92887	1545 aa		13.72	□□□□□ -0.21
PRKAR1A-208	ENST00000585815	SAMD9	Q5K651	1589 aa		13.71	□□□□□ -0.21
PRKAR1A-208	ENST00000585815	EFCAB5	A4FU69	1503 aa		13.69	□□□□□ -0.22
PRKAR1A-208	ENST00000585815	P3H3	Q8IVL6	736 aa		13.67	□□□□□ -0.22
PRKAR1A-208	ENST00000585815	RANGAP1	P46060	587 aa	Predicted RBP	13.66	□□□□□ -0.22
PRKAR1A-208	ENST00000585815	EHMT2	Q96KQ7	1210 aa		13.66	□□□□□ -0.22
PRKAR1A-208	ENST00000585815	KDM5B	Q9UGL1	1544 aa		13.65	□□□□□ -0.22
PRKAR1A-208	ENST00000585815	ABCC10	Q5T3U5	1492 aa		13.65	□□□□□ -0.22
PRKAR1A-208	ENST00000585815	PLB1	Q6P1J6	1458 aa		13.65	□□□□□ -0.22
PRKAR1A-208	ENST00000585815	ABCA8	O94911	1581 aa		13.65	□□□□□ -0.22
PRKAR1A-208	ENST00000585815	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.63	□□□□□ -0.23
PRKAR1A-208	ENST00000585815	KIF13A	Q9H1H9	1805 aa		13.62	□□□□□ -0.23
PRKAR1A-208	ENST00000585815	FAM69C	Q0P6D2	419 aa		13.62	□□□□□ -0.23
PRKAR1A-208	ENST00000585815	ASXL2	Q76L83	1435 aa		13.62	□□□□□ -0.23
PRKAR1A-208	ENST00000585815	DIP2B	Q9P265	1576 aa		13.62	□□□□□ -0.23
PRKAR1A-208	ENST00000585815	FHOD3	Q2V2M9	1422 aa		13.61	□□□□□ -0.23
PRKAR1A-208	ENST00000585815	RAPGEF6	Q8TEU7	1601 aa		13.61	□□□□□ -0.23
PRKAR1A-208	ENST00000585815	FMN1	Q68DA7	1419 aa		13.57	□□□□□ -0.24
PRKAR1A-208	ENST00000585815	GLI2	P10070	1586 aa		13.57	□□□□□ -0.24
PRKAR1A-208	ENST00000585815	WDR7	Q9Y4E6	1490 aa		13.56	□□□□□ -0.24
PRKAR1A-208	ENST00000585815	ARHGAP35	Q9NRY4	1499 aa		13.55	□□□□□ -0.24
PRKAR1A-208	ENST00000585815	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKAR1A-208	ENST00000585815	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.54	□□□□□ -0.24
PRKAR1A-208	ENST00000585815	EPRS	P07814	1512 aa	Known RBP	13.54	□□□□□ -0.24
PRKAR1A-208	ENST00000585815	ATP10B	O94823	1461 aa		13.53	□□□□□ -0.24
PRKAR1A-208	ENST00000585815	NUP153	P49790	1475 aa	Known RBP	13.51	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	TSPOAP1	O95153	1857 aa		13.5	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	CLIP1	P30622	1438 aa		13.5	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	HECW1	Q76N89	1606 aa		13.5	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	ARID3C	A6NKF2	412 aa		13.49	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	KCNH8	Q96L42	1107 aa		13.49	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	TEX14	Q8IWB6	1497 aa		13.48	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	CFAP43	Q8NDM7	1665 aa		13.48	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.48	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	MAP3K4	Q9Y6R4	1608 aa		13.47	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	PLEKHD1	A6NEE1	506 aa		13.47	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.47	□□□□□ -0.25
PRKAR1A-208	ENST00000585815	CD109	Q6YHK3	1445 aa		13.45	□□□□□ -0.26
PRKAR1A-208	ENST00000585815	CEP162	Q5TB80	1403 aa		13.43	□□□□□ -0.26
PRKAR1A-208	ENST00000585815	CASKIN1	Q8WXD9	1431 aa		13.43	□□□□□ -0.26
PRKAR1A-208	ENST00000585815	KDM6B	O15054	1643 aa		13.42	□□□□□ -0.26
PRKAR1A-208	ENST00000585815	CCDC18	Q5T9S5	1454 aa		13.42	□□□□□ -0.26
PRKAR1A-208	ENST00000585815	PPRC1	Q5VV67	1664 aa	Known RBP	13.42	□□□□□ -0.26
PRKAR1A-208	ENST00000585815	MAGI3	Q5TCQ9	1506 aa		13.42	□□□□□ -0.26
PRKAR1A-208	ENST00000585815	FYCO1	Q9BQS8	1478 aa		13.42	□□□□□ -0.26
PRKAR1A-208	ENST00000585815	CDK13	Q14004	1512 aa	Known RBP	13.41	□□□□□ -0.26
PRKAR1A-208	ENST00000585815	ABCA9	Q8IUA7	1624 aa		13.41	□□□□□ -0.26
PRKAR1A-208	ENST00000585815	PCF11	O94913	1555 aa	Known RBP	13.4	□□□□□ -0.26
PRKAR1A-208	ENST00000585815	LOC105371045	A0A1W2PR82	267 aa		13.39	□□□□□ -0.27
PRKAR1A-208	ENST00000585815	PHLDB1	Q86UU1	1377 aa		13.38	□□□□□ -0.27
PRKAR1A-208	ENST00000585815	TRO	Q12816	1431 aa	Predicted RBP	13.35	□□□□□ -0.27
PRKAR1A-208	ENST00000585815	KIF14	Q15058	1648 aa		13.34	□□□□□ -0.27
PRKAR1A-208	ENST00000585815	NEO1	Q92859	1461 aa		13.34	□□□□□ -0.27
PRKAR1A-208	ENST00000585815	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
PRKAR1A-208	ENST00000585815	LRRIQ1	Q96JM4	1722 aa		13.33	□□□□□ -0.27
PRKAR1A-208	ENST00000585815	CFAP74	Q9C0B2	1584 aa		13.33	□□□□□ -0.28
PRKAR1A-208	ENST00000585815	TTC37	Q6PGP7	1564 aa		13.31	□□□□□ -0.28
PRKAR1A-208	ENST00000585815	ARAP3	Q8WWN8	1544 aa		13.3	□□□□□ -0.28
PRKAR1A-208	ENST00000585815	MYO5C	Q9NQX4	1742 aa		13.29	□□□□□ -0.28
PRKAR1A-208	ENST00000585815	VPS8	Q8N3P4	1428 aa		13.29	□□□□□ -0.28
PRKAR1A-208	ENST00000585815	PLCH2	O75038	1416 aa		13.28	□□□□□ -0.28
PRKAR1A-208	ENST00000585815	FANCA	O15360	1455 aa		13.28	□□□□□ -0.28
PRKAR1A-208	ENST00000585815	MTUS2	Q5JR59	1369 aa		13.27	□□□□□ -0.29
PRKAR1A-208	ENST00000585815	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.27	□□□□□ -0.29
PRKAR1A-208	ENST00000585815	EFCAB2	Q5VUJ9	269 aa		13.26	□□□□□ -0.29
PRKAR1A-208	ENST00000585815	AKNA	Q7Z591	1439 aa		13.26	□□□□□ -0.29
PRKAR1A-208	ENST00000585815	EHBP1L1	Q8N3D4	1523 aa		13.23	□□□□□ -0.29
PRKAR1A-208	ENST00000585815	DENND4B	O75064	1496 aa	Predicted RBP	13.23	□□□□□ -0.29
PRKAR1A-208	ENST00000585815	ARHGAP5	Q13017	1502 aa		13.23	□□□□□ -0.29
PRKAR1A-208	ENST00000585815	ADGRL1	O94910	1474 aa		13.22	□□□□□ -0.29
PRKAR1A-208	ENST00000585815	PREX2	Q70Z35	1606 aa		13.21	□□□□□ -0.29
PRKAR1A-208	ENST00000585815	APLP2	Q06481	763 aa		13.21	□□□□□ -0.29
PRKAR1A-208	ENST00000585815	TIAM1	Q13009	1591 aa		13.2	□□□□□ -0.3

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