RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 CTTNBP2Q8WZ74 1663 aa14.8□□□□□ -0.04
ATG4D-202ENST00000585437 IQGAP2Q13576 1575 aa14.77□□□□□ -0.04
ATG4D-202ENST00000585437 CYB5RLQ6IPT4 315 aa14.77□□□□□ -0.05
ATG4D-202ENST00000585437 RAPGEF2Q9Y4G8 1499 aa14.76□□□□□ -0.05
ATG4D-202ENST00000585437 PRG4Q92954 1404 aaPredicted RBP14.75□□□□□ -0.05
ATG4D-202ENST00000585437 PRXQ9BXM0 1461 aa14.72□□□□□ -0.05
ATG4D-202ENST00000585437 JPH4Q96JJ6 628 aa14.7□□□□□ -0.06
ATG4D-202ENST00000585437 UGGT2Q9NYU1 1516 aa14.69□□□□□ -0.06
ATG4D-202ENST00000585437 EEA1Q15075 1411 aa14.67□□□□□ -0.06
ATG4D-202ENST00000585437 ADCY10Q96PN6 1610 aa14.66□□□□□ -0.06
ATG4D-202ENST00000585437 KIAA0556O60303 1618 aa14.66□□□□□ -0.06
ATG4D-202ENST00000585437 DISP1Q96F81 1524 aa14.66□□□□□ -0.06
ATG4D-202ENST00000585437 KIF21BO75037 1637 aa14.63□□□□□ -0.07
ATG4D-202ENST00000585437 KIF13AQ9H1H9 1805 aa14.62□□□□□ -0.07
ATG4D-202ENST00000585437 CARMIL2Q6F5E8 1435 aa14.6□□□□□ -0.07
ATG4D-202ENST00000585437 MAPKBP1O60336 1514 aa14.59□□□□□ -0.07
ATG4D-202ENST00000585437 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
ATG4D-202ENST00000585437 TNIKQ9UKE5 1360 aa14.56□□□□□ -0.08
ATG4D-202ENST00000585437 SAMD9Q5K651 1589 aa14.56□□□□□ -0.08
ATG4D-202ENST00000585437 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
ATG4D-202ENST00000585437 UHRF1BP1LA0JNW5 1464 aa14.54□□□□□ -0.08
ATG4D-202ENST00000585437 ABCC2Q92887 1545 aa14.53□□□□□ -0.08
ATG4D-202ENST00000585437 GOLGA3Q08378 1498 aa14.53□□□□□ -0.08
ATG4D-202ENST00000585437 PTPRGP23470 1445 aa14.53□□□□□ -0.08
ATG4D-202ENST00000585437 DIP2BQ9P265 1576 aa14.51□□□□□ -0.09
ATG4D-202ENST00000585437 ZCCHC11Q5TAX3 1644 aaKnown RBP14.49□□□□□ -0.09
ATG4D-202ENST00000585437 ABCA8O94911 1581 aa14.48□□□□□ -0.09
ATG4D-202ENST00000585437 KDM5BQ9UGL1 1544 aa14.47□□□□□ -0.09
ATG4D-202ENST00000585437 UACAQ9BZF9 1416 aa14.47□□□□□ -0.09
ATG4D-202ENST00000585437 ABCC10Q5T3U5 1492 aa14.46□□□□□ -0.09
ATG4D-202ENST00000585437 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
ATG4D-202ENST00000585437 EFCAB5A4FU69 1503 aa14.44□□□□□ -0.1
ATG4D-202ENST00000585437 PLB1Q6P1J6 1458 aa14.43□□□□□ -0.1
ATG4D-202ENST00000585437 GLI2P10070 1586 aa14.4□□□□□ -0.1
ATG4D-202ENST00000585437 RAPGEF6Q8TEU7 1601 aa14.4□□□□□ -0.1
ATG4D-202ENST00000585437 PPRC1Q5VV67 1664 aaKnown RBP14.39□□□□□ -0.11
ATG4D-202ENST00000585437 FAM9AQ8IZU1 332 aaPredicted RBP14.39□□□□□ -0.11
ATG4D-202ENST00000585437 NPM1P06748 294 aaKnown RBP eCLIP14.38□□□□□ -0.11
ATG4D-202ENST00000585437 ASXL2Q76L83 1435 aa14.38□□□□□ -0.11
ATG4D-202ENST00000585437 MAP3K4Q9Y6R4 1608 aa14.37□□□□□ -0.11
ATG4D-202ENST00000585437 TSPOAP1O95153 1857 aa14.37□□□□□ -0.11
ATG4D-202ENST00000585437 TTBK1Q5TCY1 1321 aaPredicted RBP14.34□□□□□ -0.11
ATG4D-202ENST00000585437 WDR7Q9Y4E6 1490 aa14.33□□□□□ -0.12
ATG4D-202ENST00000585437 EPRSP07814 1512 aaKnown RBP14.33□□□□□ -0.12
ATG4D-202ENST00000585437 CFAP43Q8NDM7 1665 aa14.33□□□□□ -0.12
ATG4D-202ENST00000585437 FHOD3Q2V2M9 1422 aa14.32□□□□□ -0.12
ATG4D-202ENST00000585437 NUP153P49790 1475 aaKnown RBP14.3□□□□□ -0.12
ATG4D-202ENST00000585437 ARHGAP35Q9NRY4 1499 aa14.3□□□□□ -0.12
ATG4D-202ENST00000585437 ATP10BO94823 1461 aa14.28□□□□□ -0.12
ATG4D-202ENST00000585437 FAM69CQ0P6D2 419 aa14.28□□□□□ -0.12
ATG4D-202ENST00000585437 LRRIQ1Q96JM4 1722 aa14.27□□□□□ -0.12
ATG4D-202ENST00000585437 KDM6BO15054 1643 aa14.26□□□□□ -0.13
ATG4D-202ENST00000585437 ABCA9Q8IUA7 1624 aa14.26□□□□□ -0.13
ATG4D-202ENST00000585437 P3H3Q8IVL6 736 aa14.26□□□□□ -0.13
ATG4D-202ENST00000585437 HECW1Q76N89 1606 aa14.25□□□□□ -0.13
ATG4D-202ENST00000585437 UBTFP17480 764 aaKnown RBP14.22□□□□□ -0.13
ATG4D-202ENST00000585437 FMN1Q68DA7 1419 aa14.22□□□□□ -0.13
ATG4D-202ENST00000585437 MAGI3Q5TCQ9 1506 aa14.2□□□□□ -0.14
ATG4D-202ENST00000585437 TEX14Q8IWB6 1497 aa14.2□□□□□ -0.14
ATG4D-202ENST00000585437 PCF11O94913 1555 aaKnown RBP14.19□□□□□ -0.14
ATG4D-202ENST00000585437 CDK13Q14004 1512 aaKnown RBP14.18□□□□□ -0.14
ATG4D-202ENST00000585437 RANGAP1P46060 587 aaPredicted RBP14.17□□□□□ -0.14
ATG4D-202ENST00000585437 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
ATG4D-202ENST00000585437 TTC37Q6PGP7 1564 aa14.14□□□□□ -0.15
ATG4D-202ENST00000585437 CD109Q6YHK3 1445 aa14.14□□□□□ -0.15
ATG4D-202ENST00000585437 COL17A1Q9UMD9 1497 aaPredicted RBP14.12□□□□□ -0.15
ATG4D-202ENST00000585437 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.12□□□□□ -0.15
ATG4D-202ENST00000585437 CLIP1P30622 1438 aa14.12□□□□□ -0.15
ATG4D-202ENST00000585437 FYCO1Q9BQS8 1478 aa14.12□□□□□ -0.15
ATG4D-202ENST00000585437 ARID3CA6NKF2 412 aa14.11□□□□□ -0.15
ATG4D-202ENST00000585437 CASKIN1Q8WXD9 1431 aa14.11□□□□□ -0.15
ATG4D-202ENST00000585437 CFAP74Q9C0B2 1584 aa14.11□□□□□ -0.15
ATG4D-202ENST00000585437 MYO5CQ9NQX4 1742 aa14.11□□□□□ -0.15
ATG4D-202ENST00000585437 KIF14Q15058 1648 aa14.1□□□□□ -0.15
ATG4D-202ENST00000585437 CCDC18Q5T9S5 1454 aa14.09□□□□□ -0.15
ATG4D-202ENST00000585437 ARAP3Q8WWN8 1544 aa14.09□□□□□ -0.15
ATG4D-202ENST00000585437 NEO1Q92859 1461 aa14.07□□□□□ -0.16
ATG4D-202ENST00000585437 KCNH8Q96L42 1107 aa14.07□□□□□ -0.16
ATG4D-202ENST00000585437 FRMPD1Q5SYB0 1578 aa14.07□□□□□ -0.16
ATG4D-202ENST00000585437 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
ATG4D-202ENST00000585437 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
ATG4D-202ENST00000585437 TROQ12816 1431 aaPredicted RBP14.04□□□□□ -0.16
ATG4D-202ENST00000585437 PLEKHD1A6NEE1 506 aa14.03□□□□□ -0.16
ATG4D-202ENST00000585437 PHLDB1Q86UU1 1377 aa14.03□□□□□ -0.16
ATG4D-202ENST00000585437 PREX2Q70Z35 1606 aa14.03□□□□□ -0.16
ATG4D-202ENST00000585437 CDC42BPBQ9Y5S2 1711 aa14.03□□□□□ -0.16
ATG4D-202ENST00000585437 CDC42BPAQ5VT25 1732 aa14.02□□□□□ -0.16
ATG4D-202ENST00000585437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
ATG4D-202ENST00000585437 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
ATG4D-202ENST00000585437 FANCAO15360 1455 aa14□□□□□ -0.17
ATG4D-202ENST00000585437 ZMYM4Q5VZL5 1548 aa13.99□□□□□ -0.17
ATG4D-202ENST00000585437 PLCH2O75038 1416 aa13.98□□□□□ -0.17
ATG4D-202ENST00000585437 ARHGEF40Q8TER5 1519 aa13.96□□□□□ -0.17
ATG4D-202ENST00000585437 CDK11AQ9UQ88 783 aaPredicted RBP13.95□□□□□ -0.18
ATG4D-202ENST00000585437 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
ATG4D-202ENST00000585437 EHBP1L1Q8N3D4 1523 aa13.95□□□□□ -0.18
ATG4D-202ENST00000585437 ITSN2Q9NZM3 1697 aa13.94□□□□□ -0.18
ATG4D-202ENST00000585437 ATP1B4Q9UN42 357 aaPredicted RBP13.93□□□□□ -0.18
ATG4D-202ENST00000585437 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
ATG4D-202ENST00000585437 ARHGAP5Q13017 1502 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms