RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 PRXQ9BXM0 1461 aa27.64■■■□□ 2.02
GCDH-203ENST00000585420 EEA1Q15075 1411 aa27.63■■■□□ 2.01
GCDH-203ENST00000585420 KIAA0586Q9BVV6 1533 aa27.62■■■□□ 2.01
GCDH-203ENST00000585420 JPH4Q96JJ6 628 aa27.62■■■□□ 2.01
GCDH-203ENST00000585420 CYB5RLQ6IPT4 315 aa27.61■■■□□ 2.01
GCDH-203ENST00000585420 SHROOM2Q13796 1616 aa27.6■■■□□ 2.01
GCDH-203ENST00000585420 ARAP1Q96P48 1450 aa27.6■■■□□ 2.01
GCDH-203ENST00000585420 ERCC6L2Q5T890 1561 aa27.58■■■□□ 2.01
GCDH-203ENST00000585420 PRG4Q92954 1404 aaPredicted RBP27.54■■■□□ 2
GCDH-203ENST00000585420 IQGAP2Q13576 1575 aa27.46■■□□□ 1.99
GCDH-203ENST00000585420 CTTNBP2Q8WZ74 1663 aa27.37■■□□□ 1.97
GCDH-203ENST00000585420 KIF21BO75037 1637 aa27.34■■□□□ 1.97
GCDH-203ENST00000585420 UGGT2Q9NYU1 1516 aa27.33■■□□□ 1.97
GCDH-203ENST00000585420 EHMT2Q96KQ7 1210 aa27.33■■□□□ 1.96
GCDH-203ENST00000585420 DISP1Q96F81 1524 aa27.31■■□□□ 1.96
GCDH-203ENST00000585420 CARMIL2Q6F5E8 1435 aa27.31■■□□□ 1.96
GCDH-203ENST00000585420 TTBK1Q5TCY1 1321 aaPredicted RBP27.25■■□□□ 1.95
GCDH-203ENST00000585420 TNIKQ9UKE5 1360 aa27.24■■□□□ 1.95
GCDH-203ENST00000585420 PTPRGP23470 1445 aa27.22■■□□□ 1.95
GCDH-203ENST00000585420 GOLGA3Q08378 1498 aa27.21■■□□□ 1.95
GCDH-203ENST00000585420 KIAA0556O60303 1618 aa27.21■■□□□ 1.95
GCDH-203ENST00000585420 UBTFP17480 764 aaKnown RBP27.19■■□□□ 1.94
GCDH-203ENST00000585420 RANGAP1P46060 587 aaPredicted RBP27.16■■□□□ 1.94
GCDH-203ENST00000585420 LOC105371045A0A1W2PR82 267 aa27.12■■□□□ 1.93
GCDH-203ENST00000585420 P3H3Q8IVL6 736 aa27.12■■□□□ 1.93
GCDH-203ENST00000585420 ADCY10Q96PN6 1610 aa27.08■■□□□ 1.93
GCDH-203ENST00000585420 SAMD9Q5K651 1589 aa27.06■■□□□ 1.92
GCDH-203ENST00000585420 UACAQ9BZF9 1416 aa27.04■■□□□ 1.92
GCDH-203ENST00000585420 NPM1P06748 294 aaKnown RBP eCLIP27.01■■□□□ 1.91
GCDH-203ENST00000585420 TRHP20396 242 aaPredicted RBP26.99■■□□□ 1.91
GCDH-203ENST00000585420 PLB1Q6P1J6 1458 aa26.98■■□□□ 1.91
GCDH-203ENST00000585420 UHRF1BP1LA0JNW5 1464 aa26.97■■□□□ 1.91
GCDH-203ENST00000585420 FHOD3Q2V2M9 1422 aa26.96■■□□□ 1.91
GCDH-203ENST00000585420 ABCC2Q92887 1545 aa26.96■■□□□ 1.91
GCDH-203ENST00000585420 EFCAB5A4FU69 1503 aa26.94■■□□□ 1.9
GCDH-203ENST00000585420 ABCA8O94911 1581 aa26.91■■□□□ 1.9
GCDH-203ENST00000585420 ARHGAP35Q9NRY4 1499 aa26.89■■□□□ 1.9
GCDH-203ENST00000585420 MAPKBP1O60336 1514 aa26.88■■□□□ 1.89
GCDH-203ENST00000585420 KDM5BQ9UGL1 1544 aa26.87■■□□□ 1.89
GCDH-203ENST00000585420 ZCCHC11Q5TAX3 1644 aaKnown RBP26.8■■□□□ 1.88
GCDH-203ENST00000585420 ARID3CA6NKF2 412 aa26.79■■□□□ 1.88
GCDH-203ENST00000585420 ASXL2Q76L83 1435 aa26.78■■□□□ 1.88
GCDH-203ENST00000585420 RAPGEF6Q8TEU7 1601 aa26.78■■□□□ 1.88
GCDH-203ENST00000585420 ABCC10Q5T3U5 1492 aa26.76■■□□□ 1.88
GCDH-203ENST00000585420 CLIP1P30622 1438 aa26.75■■□□□ 1.87
GCDH-203ENST00000585420 FAM69CQ0P6D2 419 aa26.74■■□□□ 1.87
GCDH-203ENST00000585420 ATP10BO94823 1461 aa26.73■■□□□ 1.87
GCDH-203ENST00000585420 NUP153P49790 1475 aaKnown RBP26.72■■□□□ 1.87
GCDH-203ENST00000585420 FMN1Q68DA7 1419 aa26.72■■□□□ 1.87
GCDH-203ENST00000585420 KIF13AQ9H1H9 1805 aa26.71■■□□□ 1.87
GCDH-203ENST00000585420 DIP2BQ9P265 1576 aa26.71■■□□□ 1.87
GCDH-203ENST00000585420 CEP162Q5TB80 1403 aa26.66■■□□□ 1.86
GCDH-203ENST00000585420 WDR7Q9Y4E6 1490 aa26.65■■□□□ 1.86
GCDH-203ENST00000585420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.65■■□□□ 1.86
GCDH-203ENST00000585420 HNRNPUL2Q1KMD3 747 aaKnown RBP26.65■■□□□ 1.86
GCDH-203ENST00000585420 ATP1B4Q9UN42 357 aaPredicted RBP26.63■■□□□ 1.85
GCDH-203ENST00000585420 EPRSP07814 1512 aaKnown RBP26.62■■□□□ 1.85
GCDH-203ENST00000585420 KCNH8Q96L42 1107 aa26.59■■□□□ 1.85
GCDH-203ENST00000585420 GLI2P10070 1586 aa26.57■■□□□ 1.84
GCDH-203ENST00000585420 HECW1Q76N89 1606 aa26.56■■□□□ 1.84
GCDH-203ENST00000585420 CDK13Q14004 1512 aaKnown RBP26.55■■□□□ 1.84
GCDH-203ENST00000585420 CASKIN1Q8WXD9 1431 aa26.53■■□□□ 1.84
GCDH-203ENST00000585420 PCF11O94913 1555 aaKnown RBP26.52■■□□□ 1.84
GCDH-203ENST00000585420 PLEKHD1A6NEE1 506 aa26.51■■□□□ 1.83
GCDH-203ENST00000585420 TSPOAP1O95153 1857 aa26.48■■□□□ 1.83
GCDH-203ENST00000585420 LRRIQ1Q96JM4 1722 aa26.46■■□□□ 1.83
GCDH-203ENST00000585420 FYCO1Q9BQS8 1478 aa26.46■■□□□ 1.83
GCDH-203ENST00000585420 MAP3K4Q9Y6R4 1608 aa26.46■■□□□ 1.83
GCDH-203ENST00000585420 PPRC1Q5VV67 1664 aaKnown RBP26.41■■□□□ 1.82
GCDH-203ENST00000585420 CD109Q6YHK3 1445 aa26.41■■□□□ 1.82
GCDH-203ENST00000585420 CDK11AQ9UQ88 783 aaPredicted RBP26.39■■□□□ 1.82
GCDH-203ENST00000585420 CCDC18Q5T9S5 1454 aa26.39■■□□□ 1.81
GCDH-203ENST00000585420 CFAP43Q8NDM7 1665 aa26.38■■□□□ 1.81
GCDH-203ENST00000585420 ABCA9Q8IUA7 1624 aa26.36■■□□□ 1.81
GCDH-203ENST00000585420 MAGI3Q5TCQ9 1506 aa26.33■■□□□ 1.8
GCDH-203ENST00000585420 VPS8Q8N3P4 1428 aa26.32■■□□□ 1.8
GCDH-203ENST00000585420 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
GCDH-203ENST00000585420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.31■■□□□ 1.8
GCDH-203ENST00000585420 TEX14Q8IWB6 1497 aa26.31■■□□□ 1.8
GCDH-203ENST00000585420 TTC37Q6PGP7 1564 aa26.27■■□□□ 1.8
GCDH-203ENST00000585420 KIF14Q15058 1648 aa26.26■■□□□ 1.79
GCDH-203ENST00000585420 KDM6BO15054 1643 aa26.25■■□□□ 1.79
GCDH-203ENST00000585420 COL17A1Q9UMD9 1497 aaPredicted RBP26.23■■□□□ 1.79
GCDH-203ENST00000585420 MTUS2Q5JR59 1369 aa26.17■■□□□ 1.78
GCDH-203ENST00000585420 PLCH2O75038 1416 aa26.16■■□□□ 1.78
GCDH-203ENST00000585420 FANCAO15360 1455 aa26.13■■□□□ 1.77
GCDH-203ENST00000585420 NEO1Q92859 1461 aa26.13■■□□□ 1.77
GCDH-203ENST00000585420 TIAM1Q13009 1591 aa26.12■■□□□ 1.77
GCDH-203ENST00000585420 PHLDB1Q86UU1 1377 aa26.11■■□□□ 1.77
GCDH-203ENST00000585420 MYO5CQ9NQX4 1742 aa26.09■■□□□ 1.77
GCDH-203ENST00000585420 ARAP3Q8WWN8 1544 aa26.09■■□□□ 1.77
GCDH-203ENST00000585420 EHBP1L1Q8N3D4 1523 aa26.08■■□□□ 1.77
GCDH-203ENST00000585420 AKNAQ7Z591 1439 aa26.08■■□□□ 1.77
GCDH-203ENST00000585420 EFCAB2Q5VUJ9 269 aa26.05■■□□□ 1.76
GCDH-203ENST00000585420 MAP3K1Q13233 1512 aa26.05■■□□□ 1.76
GCDH-203ENST00000585420 RAPGEF3O95398 923 aa26.05■■□□□ 1.76
GCDH-203ENST00000585420 KANK4Q5T7N3 995 aaPredicted RBP26.05■■□□□ 1.76
GCDH-203ENST00000585420 ARHGAP5Q13017 1502 aa26.04■■□□□ 1.76
GCDH-203ENST00000585420 CFAP74Q9C0B2 1584 aa26.04■■□□□ 1.76
GCDH-203ENST00000585420 APLP2Q06481 763 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms