RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 JPH4Q96JJ6 628 aa24.32■■□□□ 1.48
RIOK3-210ENST00000584960 SHROOM2Q13796 1616 aa24.32■■□□□ 1.48
RIOK3-210ENST00000584960 CTTNBP2Q8WZ74 1663 aa24.28■■□□□ 1.48
RIOK3-210ENST00000584960 ARHGEF11O15085 1522 aa24.27■■□□□ 1.48
RIOK3-210ENST00000584960 IQGAP2Q13576 1575 aa24.27■■□□□ 1.48
RIOK3-210ENST00000584960 RIMBP3CA6NJZ7 1639 aa24.24■■□□□ 1.47
RIOK3-210ENST00000584960 RIMBP3BA6NNM3 1639 aa24.24■■□□□ 1.47
RIOK3-210ENST00000584960 RIMBP3Q9UFD9 1639 aa24.24■■□□□ 1.47
RIOK3-210ENST00000584960 GOLGA3Q08378 1498 aa24.24■■□□□ 1.47
RIOK3-210ENST00000584960 PRG4Q92954 1404 aaPredicted RBP24.2■■□□□ 1.46
RIOK3-210ENST00000584960 UGGT2Q9NYU1 1516 aa24.16■■□□□ 1.46
RIOK3-210ENST00000584960 UBTFP17480 764 aaKnown RBP24.16■■□□□ 1.46
RIOK3-210ENST00000584960 CARMIL2Q6F5E8 1435 aa24.16■■□□□ 1.46
RIOK3-210ENST00000584960 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
RIOK3-210ENST00000584960 ARAP1Q96P48 1450 aa24.07■■□□□ 1.44
RIOK3-210ENST00000584960 DISP1Q96F81 1524 aa24.05■■□□□ 1.44
RIOK3-210ENST00000584960 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
RIOK3-210ENST00000584960 EHMT2Q96KQ7 1210 aa24.05■■□□□ 1.44
RIOK3-210ENST00000584960 TNIKQ9UKE5 1360 aa24.03■■□□□ 1.44
RIOK3-210ENST00000584960 KIAA0556O60303 1618 aa24.02■■□□□ 1.44
RIOK3-210ENST00000584960 PTPRGP23470 1445 aa23.98■■□□□ 1.43
RIOK3-210ENST00000584960 SAMD9Q5K651 1589 aa23.97■■□□□ 1.43
RIOK3-210ENST00000584960 EFCAB5A4FU69 1503 aa23.95■■□□□ 1.43
RIOK3-210ENST00000584960 RANGAP1P46060 587 aaPredicted RBP23.9■■□□□ 1.42
RIOK3-210ENST00000584960 LOC105371045A0A1W2PR82 267 aa23.88■■□□□ 1.41
RIOK3-210ENST00000584960 P3H3Q8IVL6 736 aa23.87■■□□□ 1.41
RIOK3-210ENST00000584960 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
RIOK3-210ENST00000584960 UACAQ9BZF9 1416 aa23.83■■□□□ 1.4
RIOK3-210ENST00000584960 ARHGAP35Q9NRY4 1499 aa23.82■■□□□ 1.4
RIOK3-210ENST00000584960 UHRF1BP1LA0JNW5 1464 aa23.81■■□□□ 1.4
RIOK3-210ENST00000584960 CLIP1P30622 1438 aa23.79■■□□□ 1.4
RIOK3-210ENST00000584960 NPM1P06748 294 aaKnown RBP eCLIP23.79■■□□□ 1.4
RIOK3-210ENST00000584960 FHOD3Q2V2M9 1422 aa23.78■■□□□ 1.4
RIOK3-210ENST00000584960 ADCY10Q96PN6 1610 aa23.77■■□□□ 1.4
RIOK3-210ENST00000584960 ABCC2Q92887 1545 aa23.76■■□□□ 1.39
RIOK3-210ENST00000584960 ABCA8O94911 1581 aa23.75■■□□□ 1.39
RIOK3-210ENST00000584960 FMN1Q68DA7 1419 aa23.75■■□□□ 1.39
RIOK3-210ENST00000584960 CEP162Q5TB80 1403 aa23.74■■□□□ 1.39
RIOK3-210ENST00000584960 PLB1Q6P1J6 1458 aa23.72■■□□□ 1.39
RIOK3-210ENST00000584960 RAPGEF6Q8TEU7 1601 aa23.7■■□□□ 1.38
RIOK3-210ENST00000584960 KDM5BQ9UGL1 1544 aa23.67■■□□□ 1.38
RIOK3-210ENST00000584960 MAPKBP1O60336 1514 aa23.62■■□□□ 1.37
RIOK3-210ENST00000584960 ZCCHC11Q5TAX3 1644 aaKnown RBP23.59■■□□□ 1.37
RIOK3-210ENST00000584960 NUP153P49790 1475 aaKnown RBP23.57■■□□□ 1.36
RIOK3-210ENST00000584960 HECW1Q76N89 1606 aa23.56■■□□□ 1.36
RIOK3-210ENST00000584960 CASKIN1Q8WXD9 1431 aa23.56■■□□□ 1.36
RIOK3-210ENST00000584960 ATP10BO94823 1461 aa23.56■■□□□ 1.36
RIOK3-210ENST00000584960 ATP1B4Q9UN42 357 aaPredicted RBP23.52■■□□□ 1.36
RIOK3-210ENST00000584960 ASXL2Q76L83 1435 aa23.51■■□□□ 1.35
RIOK3-210ENST00000584960 FYCO1Q9BQS8 1478 aa23.51■■□□□ 1.35
RIOK3-210ENST00000584960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.5■■□□□ 1.35
RIOK3-210ENST00000584960 HNRNPUL2Q1KMD3 747 aaKnown RBP23.5■■□□□ 1.35
RIOK3-210ENST00000584960 EPRSP07814 1512 aaKnown RBP23.49■■□□□ 1.35
RIOK3-210ENST00000584960 PCF11O94913 1555 aaKnown RBP23.48■■□□□ 1.35
RIOK3-210ENST00000584960 TRHP20396 242 aaPredicted RBP23.47■■□□□ 1.35
RIOK3-210ENST00000584960 PLEKHD1A6NEE1 506 aa23.46■■□□□ 1.35
RIOK3-210ENST00000584960 ARID3CA6NKF2 412 aa23.46■■□□□ 1.35
RIOK3-210ENST00000584960 ABCC10Q5T3U5 1492 aa23.46■■□□□ 1.35
RIOK3-210ENST00000584960 CCDC18Q5T9S5 1454 aa23.46■■□□□ 1.35
RIOK3-210ENST00000584960 VPS8Q8N3P4 1428 aa23.46■■□□□ 1.35
RIOK3-210ENST00000584960 CDK11AQ9UQ88 783 aaPredicted RBP23.46■■□□□ 1.35
RIOK3-210ENST00000584960 WDR7Q9Y4E6 1490 aa23.45■■□□□ 1.34
RIOK3-210ENST00000584960 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
RIOK3-210ENST00000584960 KIF13AQ9H1H9 1805 aa23.4■■□□□ 1.34
RIOK3-210ENST00000584960 DIP2BQ9P265 1576 aa23.4■■□□□ 1.34
RIOK3-210ENST00000584960 FAM69CQ0P6D2 419 aa23.4■■□□□ 1.34
RIOK3-210ENST00000584960 GLI2P10070 1586 aa23.4■■□□□ 1.34
RIOK3-210ENST00000584960 CDK13Q14004 1512 aaKnown RBP23.39■■□□□ 1.34
RIOK3-210ENST00000584960 KCNH8Q96L42 1107 aa23.35■■□□□ 1.33
RIOK3-210ENST00000584960 TROQ12816 1431 aaPredicted RBP23.3■■□□□ 1.32
RIOK3-210ENST00000584960 MAP3K1Q13233 1512 aa23.29■■□□□ 1.32
RIOK3-210ENST00000584960 CFAP43Q8NDM7 1665 aa23.28■■□□□ 1.32
RIOK3-210ENST00000584960 APLP2Q06481 763 aa23.27■■□□□ 1.32
RIOK3-210ENST00000584960 ABCA9Q8IUA7 1624 aa23.26■■□□□ 1.31
RIOK3-210ENST00000584960 MAP3K4Q9Y6R4 1608 aa23.26■■□□□ 1.31
RIOK3-210ENST00000584960 MTUS2Q5JR59 1369 aa23.23■■□□□ 1.31
RIOK3-210ENST00000584960 CD109Q6YHK3 1445 aa23.23■■□□□ 1.31
RIOK3-210ENST00000584960 TIAM1Q13009 1591 aa23.23■■□□□ 1.31
RIOK3-210ENST00000584960 KIF14Q15058 1648 aa23.22■■□□□ 1.31
RIOK3-210ENST00000584960 TSPOAP1O95153 1857 aa23.21■■□□□ 1.31
RIOK3-210ENST00000584960 MAGI3Q5TCQ9 1506 aa23.19■■□□□ 1.3
RIOK3-210ENST00000584960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.19■■□□□ 1.32e-14■□□□□ 8.1
RIOK3-210ENST00000584960 EHBP1L1Q8N3D4 1523 aa23.18■■□□□ 1.3
RIOK3-210ENST00000584960 TEX14Q8IWB6 1497 aa23.18■■□□□ 1.3
RIOK3-210ENST00000584960 PPRC1Q5VV67 1664 aaKnown RBP23.14■■□□□ 1.29
RIOK3-210ENST00000584960 LRRC9Q6ZRR7 1453 aa23.14■■□□□ 1.29
RIOK3-210ENST00000584960 TTC37Q6PGP7 1564 aa23.12■■□□□ 1.29
RIOK3-210ENST00000584960 PHLDB1Q86UU1 1377 aa23.12■■□□□ 1.29
RIOK3-210ENST00000584960 MYO5CQ9NQX4 1742 aa23.11■■□□□ 1.29
RIOK3-210ENST00000584960 PLCH2O75038 1416 aa23.1■■□□□ 1.29
RIOK3-210ENST00000584960 ARAP3Q8WWN8 1544 aa23.1■■□□□ 1.29
RIOK3-210ENST00000584960 SUPT6HQ7KZ85 1726 aaKnown RBP23.1■■□□□ 1.29
RIOK3-210ENST00000584960 KANK4Q5T7N3 995 aaPredicted RBP23.07■■□□□ 1.28
RIOK3-210ENST00000584960 NEO1Q92859 1461 aa23.06■■□□□ 1.28
RIOK3-210ENST00000584960 CFAP74Q9C0B2 1584 aa23.06■■□□□ 1.28
RIOK3-210ENST00000584960 EFCAB2Q5VUJ9 269 aa23.05■■□□□ 1.28
RIOK3-210ENST00000584960 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
RIOK3-210ENST00000584960 CDC42BPAQ5VT25 1732 aa23.03■■□□□ 1.28
RIOK3-210ENST00000584960 FANCAO15360 1455 aa23.03■■□□□ 1.28
RIOK3-210ENST00000584960 NCOA2Q15596 1464 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms