RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 TIAM1Q13009 1591 aa23.41■■□□□ 1.34
TVP23C-210ENST00000584811 KIF21AQ7Z4S6 1674 aa23.4■■□□□ 1.34
TVP23C-210ENST00000584811 PHLDB1Q86UU1 1377 aa23.38■■□□□ 1.33
TVP23C-210ENST00000584811 PCF11O94913 1555 aaKnown RBP23.38■■□□□ 1.33
TVP23C-210ENST00000584811 LRRC9Q6ZRR7 1453 aa23.36■■□□□ 1.33
TVP23C-210ENST00000584811 GAPVD1Q14C86 1478 aa23.34■■□□□ 1.33
TVP23C-210ENST00000584811 FAM50AQ14320 339 aaKnown RBP23.33■■□□□ 1.33
TVP23C-210ENST00000584811 WDR97A6NE52 1622 aa23.33■■□□□ 1.32
TVP23C-210ENST00000584811 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
TVP23C-210ENST00000584811 SCAF1Q9H7N4 1312 aaKnown RBP23.31■■□□□ 1.32
TVP23C-210ENST00000584811 CUL7Q14999 1698 aa23.3■■□□□ 1.32
TVP23C-210ENST00000584811 ABCA5Q8WWZ7 1642 aa23.29■■□□□ 1.32
TVP23C-210ENST00000584811 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.31
TVP23C-210ENST00000584811 MAP3K1Q13233 1512 aa23.24■■□□□ 1.31
TVP23C-210ENST00000584811 RAB3GAP2Q9H2M9 1393 aa23.24■■□□□ 1.31
TVP23C-210ENST00000584811 NEUROD1Q13562 356 aa23.23■■□□□ 1.31
TVP23C-210ENST00000584811 CTTNBP2Q8WZ74 1663 aa23.23■■□□□ 1.31
TVP23C-210ENST00000584811 TARBP1Q13395 1621 aaKnown RBP23.2■■□□□ 1.3
TVP23C-210ENST00000584811 CASKIN1Q8WXD9 1431 aa23.2■■□□□ 1.3
TVP23C-210ENST00000584811 MIER1Q8N108 512 aa23.19■■□□□ 1.3
TVP23C-210ENST00000584811 EFCAB5A4FU69 1503 aa23.18■■□□□ 1.3
TVP23C-210ENST00000584811 CFAP43Q8NDM7 1665 aa23.18■■□□□ 1.3
TVP23C-210ENST00000584811 FYCO1Q9BQS8 1478 aa23.17■■□□□ 1.3
TVP23C-210ENST00000584811 YTHDC1Q96MU7 727 aaKnown RBP23.15■■□□□ 1.3
TVP23C-210ENST00000584811 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
TVP23C-210ENST00000584811 ARID3CA6NKF2 412 aa23.14■■□□□ 1.3
TVP23C-210ENST00000584811 CLSPNQ9HAW4 1339 aa23.13■■□□□ 1.29
TVP23C-210ENST00000584811 FMN1Q68DA7 1419 aa23.11■■□□□ 1.29
TVP23C-210ENST00000584811 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
TVP23C-210ENST00000584811 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
TVP23C-210ENST00000584811 SETD5Q9C0A6 1442 aa23.09■■□□□ 1.29
TVP23C-210ENST00000584811 MRC2Q9UBG0 1479 aa23.08■■□□□ 1.29
TVP23C-210ENST00000584811 MTUS2Q5JR59 1369 aa23.08■■□□□ 1.28
TVP23C-210ENST00000584811 SAMD9Q5K651 1589 aa23.07■■□□□ 1.28
TVP23C-210ENST00000584811 SIN3AQ96ST3 1273 aa23.07■■□□□ 1.28
TVP23C-210ENST00000584811 MAPKBP1O60336 1514 aa23.06■■□□□ 1.28
TVP23C-210ENST00000584811 LRRIQ1Q96JM4 1722 aa23.05■■□□□ 1.28
TVP23C-210ENST00000584811 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
TVP23C-210ENST00000584811 GRIN2BQ13224 1484 aa23■■□□□ 1.27
TVP23C-210ENST00000584811 FGD6Q6ZV73 1430 aa22.99■■□□□ 1.27
TVP23C-210ENST00000584811 PTPRKQ15262 1439 aa22.98■■□□□ 1.27
TVP23C-210ENST00000584811 ADAMTS12P58397 1594 aa22.95■■□□□ 1.26
TVP23C-210ENST00000584811 MAGI3Q5TCQ9 1506 aa22.95■■□□□ 1.26
TVP23C-210ENST00000584811 NCOA2Q15596 1464 aa22.95■■□□□ 1.26
TVP23C-210ENST00000584811 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
TVP23C-210ENST00000584811 GTF3C3Q9Y5Q9 886 aa22.92■■□□□ 1.26
TVP23C-210ENST00000584811 IQGAP2Q13576 1575 aa22.9■■□□□ 1.26
TVP23C-210ENST00000584811 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
TVP23C-210ENST00000584811 CDK13Q14004 1512 aaKnown RBP22.88■■□□□ 1.25
TVP23C-210ENST00000584811 CHIC2Q9UKJ5 165 aa22.88■■□□□ 1.25
TVP23C-210ENST00000584811 IFT140Q96RY7 1462 aa22.87■■□□□ 1.25
TVP23C-210ENST00000584811 WDR62O43379 1518 aa22.87■■□□□ 1.25
TVP23C-210ENST00000584811 MYOM3Q5VTT5 1437 aa22.86■■□□□ 1.25
TVP23C-210ENST00000584811 FBLN2P98095 1184 aa22.86■■□□□ 1.25
TVP23C-210ENST00000584811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.83■■□□□ 1.25
TVP23C-210ENST00000584811 HIRIP3Q9BW71 556 aaPredicted RBP22.83■■□□□ 1.25
TVP23C-210ENST00000584811 RRP7BPQ9NSQ0 103 aa22.83■■□□□ 1.24
TVP23C-210ENST00000584811 EPRSP07814 1512 aaKnown RBP22.81■■□□□ 1.24
TVP23C-210ENST00000584811 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
TVP23C-210ENST00000584811 EHBP1L1Q8N3D4 1523 aa22.79■■□□□ 1.24
TVP23C-210ENST00000584811 SUPT6HQ7KZ85 1726 aaKnown RBP22.78■■□□□ 1.24
TVP23C-210ENST00000584811 CCDC18Q5T9S5 1454 aa22.78■■□□□ 1.24
TVP23C-210ENST00000584811 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
TVP23C-210ENST00000584811 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
TVP23C-210ENST00000584811 DISP1Q96F81 1524 aa22.75■■□□□ 1.23
TVP23C-210ENST00000584811 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
TVP23C-210ENST00000584811 NAIPQ13075 1403 aa22.75■■□□□ 1.23
TVP23C-210ENST00000584811 HFM1A2PYH4 1435 aa22.75■■□□□ 1.23
TVP23C-210ENST00000584811 GRIN2AQ12879 1464 aa22.74■■□□□ 1.23
TVP23C-210ENST00000584811 HECW1Q76N89 1606 aa22.73■■□□□ 1.23
TVP23C-210ENST00000584811 PTPN23Q9H3S7 1636 aa22.73■■□□□ 1.23
TVP23C-210ENST00000584811 ARHGEF11O15085 1522 aa22.73■■□□□ 1.23
TVP23C-210ENST00000584811 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
TVP23C-210ENST00000584811 ZNF644Q9H582 1327 aaPredicted RBP22.7■■□□□ 1.22
TVP23C-210ENST00000584811 KCNH8Q96L42 1107 aa22.68■■□□□ 1.22
TVP23C-210ENST00000584811 KIAA0556O60303 1618 aa22.67■■□□□ 1.22
TVP23C-210ENST00000584811 PPP1R15AO75807 674 aaPredicted RBP22.67■■□□□ 1.22
TVP23C-210ENST00000584811 NUP153P49790 1475 aaKnown RBP22.65■■□□□ 1.22
TVP23C-210ENST00000584811 UACAQ9BZF9 1416 aa22.65■■□□□ 1.22
TVP23C-210ENST00000584811 DDX10Q13206 875 aaKnown RBP22.65■■□□□ 1.22
TVP23C-210ENST00000584811 TRIM52Q96A61 297 aa22.63■■□□□ 1.21
TVP23C-210ENST00000584811 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
TVP23C-210ENST00000584811 KDM6BO15054 1643 aa22.62■■□□□ 1.21
TVP23C-210ENST00000584811 FOXD1Q16676 465 aa22.62■■□□□ 1.21
TVP23C-210ENST00000584811 PLB1Q6P1J6 1458 aa22.61■■□□□ 1.21
TVP23C-210ENST00000584811 TCOF1Q13428 1488 aaKnown RBP22.59■■□□□ 1.21
TVP23C-210ENST00000584811 TONSLQ96HA7 1378 aa22.59■■□□□ 1.21
TVP23C-210ENST00000584811 PRG4Q92954 1404 aaPredicted RBP22.58■■□□□ 1.21
TVP23C-210ENST00000584811 JPH4Q96JJ6 628 aa22.58■■□□□ 1.21
TVP23C-210ENST00000584811 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
TVP23C-210ENST00000584811 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
TVP23C-210ENST00000584811 DENND4BO75064 1496 aaPredicted RBP22.56■■□□□ 1.2
TVP23C-210ENST00000584811 RAPGEF6Q8TEU7 1601 aa22.54■■□□□ 1.2
TVP23C-210ENST00000584811 TIMELESSQ9UNS1 1208 aa22.53■■□□□ 1.2
TVP23C-210ENST00000584811 ZNF777Q9ULD5 760 aaPredicted RBP22.52■■□□□ 1.2
TVP23C-210ENST00000584811 MIA2Q96PC5 1412 aa22.51■■□□□ 1.19
TVP23C-210ENST00000584811 MPHOSPH9Q99550 1183 aa22.48■■□□□ 1.19
TVP23C-210ENST00000584811 ABCC5O15440 1437 aa22.47■■□□□ 1.19
TVP23C-210ENST00000584811 DAPK1P53355 1430 aa22.47■■□□□ 1.19
TVP23C-210ENST00000584811 CDK11AQ9UQ88 783 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms