RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 ARAP1Q96P48 1450 aa22.15■■□□□ 1.14
UBBP4-202ENST00000584755 VPS8Q8N3P4 1428 aa22.13■■□□□ 1.13
UBBP4-202ENST00000584755 EFCAB5A4FU69 1503 aa22.11■■□□□ 1.13
UBBP4-202ENST00000584755 IQGAP2Q13576 1575 aa22.09■■□□□ 1.13
UBBP4-202ENST00000584755 RANGAP1P46060 587 aaPredicted RBP22.09■■□□□ 1.13
UBBP4-202ENST00000584755 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
UBBP4-202ENST00000584755 KIAA0586Q9BVV6 1533 aa22.08■■□□□ 1.12
UBBP4-202ENST00000584755 NUP160Q12769 1436 aa22.07■■□□□ 1.12
UBBP4-202ENST00000584755 SAMD9Q5K651 1589 aa22.06■■□□□ 1.12
UBBP4-202ENST00000584755 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
UBBP4-202ENST00000584755 UGGT2Q9NYU1 1516 aa22.02■■□□□ 1.12
UBBP4-202ENST00000584755 CHD1O14646 1710 aa21.98■■□□□ 1.11
UBBP4-202ENST00000584755 FBLN2P98095 1184 aa21.97■■□□□ 1.11
UBBP4-202ENST00000584755 FHOD3Q2V2M9 1422 aa21.94■■□□□ 1.1
UBBP4-202ENST00000584755 DISP1Q96F81 1524 aa21.89■■□□□ 1.09
UBBP4-202ENST00000584755 FMN1Q68DA7 1419 aa21.88■■□□□ 1.09
UBBP4-202ENST00000584755 P3H3Q8IVL6 736 aa21.88■■□□□ 1.09
UBBP4-202ENST00000584755 KIAA0556O60303 1618 aa21.87■■□□□ 1.09
UBBP4-202ENST00000584755 CASKIN1Q8WXD9 1431 aa21.84■■□□□ 1.09
UBBP4-202ENST00000584755 PCF11O94913 1555 aaKnown RBP21.84■■□□□ 1.09
UBBP4-202ENST00000584755 FYCO1Q9BQS8 1478 aa21.83■■□□□ 1.09
UBBP4-202ENST00000584755 MAP3K1Q13233 1512 aa21.83■■□□□ 1.08
UBBP4-202ENST00000584755 JPH4Q96JJ6 628 aa21.82■■□□□ 1.08
UBBP4-202ENST00000584755 SHROOM2Q13796 1616 aa21.81■■□□□ 1.08
UBBP4-202ENST00000584755 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
UBBP4-202ENST00000584755 APLP2Q06481 763 aa21.79■■□□□ 1.08
UBBP4-202ENST00000584755 TRIM26Q12899 539 aaPredicted RBP21.77■■□□□ 1.08
UBBP4-202ENST00000584755 CARMIL2Q6F5E8 1435 aa21.77■■□□□ 1.08
UBBP4-202ENST00000584755 PPARGC1BQ86YN6 1023 aaKnown RBP21.76■■□□□ 1.07
UBBP4-202ENST00000584755 TIAM1Q13009 1591 aa21.76■■□□□ 1.07
UBBP4-202ENST00000584755 CFAP43Q8NDM7 1665 aa21.74■■□□□ 1.07
UBBP4-202ENST00000584755 PRG4Q92954 1404 aaPredicted RBP21.7■■□□□ 1.06
UBBP4-202ENST00000584755 HECW1Q76N89 1606 aa21.68■■□□□ 1.06
UBBP4-202ENST00000584755 LRRIQ1Q96JM4 1722 aa21.67■■□□□ 1.06
UBBP4-202ENST00000584755 KANK4Q5T7N3 995 aaPredicted RBP21.66■■□□□ 1.06
UBBP4-202ENST00000584755 PCGF6Q9BYE7 350 aa21.65■■□□□ 1.06
UBBP4-202ENST00000584755 LRRC9Q6ZRR7 1453 aa21.65■■□□□ 1.06
UBBP4-202ENST00000584755 CCDC18Q5T9S5 1454 aa21.63■■□□□ 1.05
UBBP4-202ENST00000584755 RAPGEF6Q8TEU7 1601 aa21.63■■□□□ 1.05
UBBP4-202ENST00000584755 EPRSP07814 1512 aaKnown RBP21.59■■□□□ 1.05
UBBP4-202ENST00000584755 ABCA8O94911 1581 aa21.59■■□□□ 1.05
UBBP4-202ENST00000584755 TTBK1Q5TCY1 1321 aaPredicted RBP21.58■■□□□ 1.05
UBBP4-202ENST00000584755 ATP1B4Q9UN42 357 aaPredicted RBP21.58■■□□□ 1.05
UBBP4-202ENST00000584755 ERCC6L2Q5T890 1561 aa21.58■■□□□ 1.05
UBBP4-202ENST00000584755 NUP153P49790 1475 aaKnown RBP21.58■■□□□ 1.05
UBBP4-202ENST00000584755 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
UBBP4-202ENST00000584755 PLB1Q6P1J6 1458 aa21.56■■□□□ 1.04
UBBP4-202ENST00000584755 PTPRGP23470 1445 aa21.56■■□□□ 1.04
UBBP4-202ENST00000584755 CDK13Q14004 1512 aaKnown RBP21.51■■□□□ 1.03
UBBP4-202ENST00000584755 EHBP1L1Q8N3D4 1523 aa21.51■■□□□ 1.03
UBBP4-202ENST00000584755 MAGI3Q5TCQ9 1506 aa21.49■■□□□ 1.03
UBBP4-202ENST00000584755 MTUS2Q5JR59 1369 aa21.47■■□□□ 1.03
UBBP4-202ENST00000584755 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
UBBP4-202ENST00000584755 UACAQ9BZF9 1416 aa21.45■■□□□ 1.03
UBBP4-202ENST00000584755 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
UBBP4-202ENST00000584755 SUPT6HQ7KZ85 1726 aaKnown RBP21.42■■□□□ 1.02
UBBP4-202ENST00000584755 ABCC2Q92887 1545 aa21.42■■□□□ 1.02
UBBP4-202ENST00000584755 PHLDB1Q86UU1 1377 aa21.42■■□□□ 1.02
UBBP4-202ENST00000584755 ATP10BO94823 1461 aa21.41■■□□□ 1.02
UBBP4-202ENST00000584755 UHRF1BP1LA0JNW5 1464 aa21.41■■□□□ 1.02
UBBP4-202ENST00000584755 NCOA2Q15596 1464 aa21.39■■□□□ 1.02
UBBP4-202ENST00000584755 CDK11AQ9UQ88 783 aaPredicted RBP21.37■■□□□ 1.01
UBBP4-202ENST00000584755 CCNB3Q8WWL7 1395 aa21.36■■□□□ 1.01
UBBP4-202ENST00000584755 ARID3CA6NKF2 412 aa21.36■■□□□ 1.01
UBBP4-202ENST00000584755 TROQ12816 1431 aaPredicted RBP21.35■■□□□ 1.01
UBBP4-202ENST00000584755 ADCY10Q96PN6 1610 aa21.33■■□□□ 1.01
UBBP4-202ENST00000584755 MYOM3Q5VTT5 1437 aa21.31■■□□□ 1
UBBP4-202ENST00000584755 KDM5BQ9UGL1 1544 aa21.31■■□□□ 1
UBBP4-202ENST00000584755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.3■■□□□ 1
UBBP4-202ENST00000584755 FGD6Q6ZV73 1430 aa21.29■■□□□ 1
UBBP4-202ENST00000584755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.29■■□□□ 1
UBBP4-202ENST00000584755 HNRNPUL2Q1KMD3 747 aaKnown RBP21.29■■□□□ 1
UBBP4-202ENST00000584755 PLEKHD1A6NEE1 506 aa21.26■□□□□ 0.99
UBBP4-202ENST00000584755 ZCCHC11Q5TAX3 1644 aaKnown RBP21.25■□□□□ 0.99
UBBP4-202ENST00000584755 KIF14Q15058 1648 aa21.24■□□□□ 0.99
UBBP4-202ENST00000584755 MIA2Q96PC5 1412 aa21.23■□□□□ 0.99
UBBP4-202ENST00000584755 TCOF1Q13428 1488 aaKnown RBP21.21■□□□□ 0.99
UBBP4-202ENST00000584755 ABCC10Q5T3U5 1492 aa21.21■□□□□ 0.99
UBBP4-202ENST00000584755 PTPN23Q9H3S7 1636 aa21.19■□□□□ 0.98
UBBP4-202ENST00000584755 ITSN2Q9NZM3 1697 aa21.17■□□□□ 0.98
UBBP4-202ENST00000584755 GPATCH8Q9UKJ3 1502 aaKnown RBP21.16■□□□□ 0.98
UBBP4-202ENST00000584755 RIMBP3CA6NJZ7 1639 aa21.14■□□□□ 0.97
UBBP4-202ENST00000584755 RIMBP3BA6NNM3 1639 aa21.14■□□□□ 0.97
UBBP4-202ENST00000584755 RIMBP3Q9UFD9 1639 aa21.14■□□□□ 0.97
UBBP4-202ENST00000584755 FAM50AQ14320 339 aaKnown RBP21.13■□□□□ 0.97
UBBP4-202ENST00000584755 CDC42BPAQ5VT25 1732 aa21.12■□□□□ 0.97
UBBP4-202ENST00000584755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.08■□□□□ 0.97
UBBP4-202ENST00000584755 WDR7Q9Y4E6 1490 aa21.08■□□□□ 0.96
UBBP4-202ENST00000584755 TTC37Q6PGP7 1564 aa21.06■□□□□ 0.96
UBBP4-202ENST00000584755 PREX2Q70Z35 1606 aa21.06■□□□□ 0.96
UBBP4-202ENST00000584755 CFDP1Q9UEE9 299 aaPredicted RBP21.04■□□□□ 0.96
UBBP4-202ENST00000584755 PTPRKQ15262 1439 aa21.04■□□□□ 0.96
UBBP4-202ENST00000584755 CAMSAP2Q08AD1 1489 aa21.03■□□□□ 0.96
UBBP4-202ENST00000584755 ITGAEP38570 1179 aa21.02■□□□□ 0.96
UBBP4-202ENST00000584755 ASXL2Q76L83 1435 aa21.02■□□□□ 0.96
UBBP4-202ENST00000584755 CDC42BPBQ9Y5S2 1711 aa21.01■□□□□ 0.95
UBBP4-202ENST00000584755 DNMT1P26358 1616 aaKnown RBP21■□□□□ 0.95
UBBP4-202ENST00000584755 MYO5CQ9NQX4 1742 aa21■□□□□ 0.95
UBBP4-202ENST00000584755 NPM1P06748 294 aaKnown RBP eCLIP21■□□□□ 0.95
UBBP4-202ENST00000584755 ZNF644Q9H582 1327 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms