RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 CARMIL1Q5VZK9 1371 aa22.6■■□□□ 1.21
ERBB2-220ENST00000584684 PRG4Q92954 1404 aaPredicted RBP22.58■■□□□ 1.21
ERBB2-220ENST00000584684 JPH4Q96JJ6 628 aa22.55■■□□□ 1.2
ERBB2-220ENST00000584684 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
ERBB2-220ENST00000584684 IQGAP2Q13576 1575 aa22.47■■□□□ 1.19
ERBB2-220ENST00000584684 TRHP20396 242 aaPredicted RBP22.38■■□□□ 1.17
ERBB2-220ENST00000584684 PRXQ9BXM0 1461 aa22.37■■□□□ 1.17
ERBB2-220ENST00000584684 CARMIL2Q6F5E8 1435 aa22.35■■□□□ 1.17
ERBB2-220ENST00000584684 CTTNBP2Q8WZ74 1663 aa22.35■■□□□ 1.17
ERBB2-220ENST00000584684 UGGT2Q9NYU1 1516 aa22.35■■□□□ 1.17
ERBB2-220ENST00000584684 ADCY10Q96PN6 1610 aa22.35■■□□□ 1.17
ERBB2-220ENST00000584684 DISP1Q96F81 1524 aa22.31■■□□□ 1.16
ERBB2-220ENST00000584684 MAPKBP1O60336 1514 aa22.3■■□□□ 1.16
ERBB2-220ENST00000584684 TNIKQ9UKE5 1360 aa22.29■■□□□ 1.16
ERBB2-220ENST00000584684 EEA1Q15075 1411 aa22.28■■□□□ 1.16
ERBB2-220ENST00000584684 PTPRGP23470 1445 aa22.27■■□□□ 1.16
ERBB2-220ENST00000584684 KIAA0556O60303 1618 aa22.26■■□□□ 1.15
ERBB2-220ENST00000584684 KIF13AQ9H1H9 1805 aa22.23■■□□□ 1.15
ERBB2-220ENST00000584684 UHRF1BP1LA0JNW5 1464 aa22.21■■□□□ 1.15
ERBB2-220ENST00000584684 ABCC2Q92887 1545 aa22.18■■□□□ 1.14
ERBB2-220ENST00000584684 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
ERBB2-220ENST00000584684 ABCC10Q5T3U5 1492 aa22.17■■□□□ 1.14
ERBB2-220ENST00000584684 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
ERBB2-220ENST00000584684 NPM1P06748 294 aaKnown RBP eCLIP22.16■■□□□ 1.14
ERBB2-220ENST00000584684 DIP2BQ9P265 1576 aa22.16■■□□□ 1.14
ERBB2-220ENST00000584684 UACAQ9BZF9 1416 aa22.14■■□□□ 1.14
ERBB2-220ENST00000584684 KIF21BO75037 1637 aa22.09■■□□□ 1.13
ERBB2-220ENST00000584684 KDM5BQ9UGL1 1544 aa22.09■■□□□ 1.13
ERBB2-220ENST00000584684 SAMD9Q5K651 1589 aa22.05■■□□□ 1.12
ERBB2-220ENST00000584684 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
ERBB2-220ENST00000584684 PLB1Q6P1J6 1458 aa22.04■■□□□ 1.12
ERBB2-220ENST00000584684 TTBK1Q5TCY1 1321 aaPredicted RBP22.04■■□□□ 1.12
ERBB2-220ENST00000584684 ABCA8O94911 1581 aa22.04■■□□□ 1.12
ERBB2-220ENST00000584684 ZCCHC11Q5TAX3 1644 aaKnown RBP22.03■■□□□ 1.12
ERBB2-220ENST00000584684 ASXL2Q76L83 1435 aa22.02■■□□□ 1.12
ERBB2-220ENST00000584684 FAM69CQ0P6D2 419 aa22.01■■□□□ 1.11
ERBB2-220ENST00000584684 GLI2P10070 1586 aa21.99■■□□□ 1.11
ERBB2-220ENST00000584684 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
ERBB2-220ENST00000584684 EPRSP07814 1512 aaKnown RBP21.91■■□□□ 1.1
ERBB2-220ENST00000584684 EFCAB5A4FU69 1503 aa21.9■■□□□ 1.1
ERBB2-220ENST00000584684 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
ERBB2-220ENST00000584684 MAP3K4Q9Y6R4 1608 aa21.89■■□□□ 1.09
ERBB2-220ENST00000584684 PPRC1Q5VV67 1664 aaKnown RBP21.88■■□□□ 1.09
ERBB2-220ENST00000584684 TSPOAP1O95153 1857 aa21.88■■□□□ 1.09
ERBB2-220ENST00000584684 RAPGEF6Q8TEU7 1601 aa21.86■■□□□ 1.09
ERBB2-220ENST00000584684 KDM6BO15054 1643 aa21.84■■□□□ 1.09
ERBB2-220ENST00000584684 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
ERBB2-220ENST00000584684 P3H3Q8IVL6 736 aa21.8■■□□□ 1.08
ERBB2-220ENST00000584684 CFAP43Q8NDM7 1665 aa21.79■■□□□ 1.08
ERBB2-220ENST00000584684 ATP10BO94823 1461 aa21.78■■□□□ 1.08
ERBB2-220ENST00000584684 TEX14Q8IWB6 1497 aa21.77■■□□□ 1.08
ERBB2-220ENST00000584684 NUP153P49790 1475 aaKnown RBP21.77■■□□□ 1.07
ERBB2-220ENST00000584684 MAGI3Q5TCQ9 1506 aa21.72■■□□□ 1.07
ERBB2-220ENST00000584684 UBTFP17480 764 aaKnown RBP21.7■■□□□ 1.06
ERBB2-220ENST00000584684 ARHGAP35Q9NRY4 1499 aa21.69■■□□□ 1.06
ERBB2-220ENST00000584684 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
ERBB2-220ENST00000584684 CD109Q6YHK3 1445 aa21.67■■□□□ 1.06
ERBB2-220ENST00000584684 RANGAP1P46060 587 aaPredicted RBP21.67■■□□□ 1.06
ERBB2-220ENST00000584684 FMN1Q68DA7 1419 aa21.65■■□□□ 1.06
ERBB2-220ENST00000584684 ARID3CA6NKF2 412 aa21.62■■□□□ 1.05
ERBB2-220ENST00000584684 COL17A1Q9UMD9 1497 aaPredicted RBP21.62■■□□□ 1.05
ERBB2-220ENST00000584684 HECW1Q76N89 1606 aa21.62■■□□□ 1.05
ERBB2-220ENST00000584684 KCNH8Q96L42 1107 aa21.61■■□□□ 1.05
ERBB2-220ENST00000584684 EHMT2Q96KQ7 1210 aa21.58■■□□□ 1.05
ERBB2-220ENST00000584684 CDK13Q14004 1512 aaKnown RBP21.55■■□□□ 1.04
ERBB2-220ENST00000584684 ARAP3Q8WWN8 1544 aa21.55■■□□□ 1.04
ERBB2-220ENST00000584684 PHLDB1Q86UU1 1377 aa21.53■■□□□ 1.04
ERBB2-220ENST00000584684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.53■■□□□ 1.04
ERBB2-220ENST00000584684 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
ERBB2-220ENST00000584684 NEO1Q92859 1461 aa21.52■■□□□ 1.03
ERBB2-220ENST00000584684 PLEKHD1A6NEE1 506 aa21.5■■□□□ 1.03
ERBB2-220ENST00000584684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.49■■□□□ 1.03
ERBB2-220ENST00000584684 TTC37Q6PGP7 1564 aa21.48■■□□□ 1.03
ERBB2-220ENST00000584684 LRRIQ1Q96JM4 1722 aa21.48■■□□□ 1.03
ERBB2-220ENST00000584684 PCF11O94913 1555 aaKnown RBP21.47■■□□□ 1.03
ERBB2-220ENST00000584684 CFAP74Q9C0B2 1584 aa21.47■■□□□ 1.03
ERBB2-220ENST00000584684 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
ERBB2-220ENST00000584684 CLIP1P30622 1438 aa21.45■■□□□ 1.02
ERBB2-220ENST00000584684 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
ERBB2-220ENST00000584684 FYCO1Q9BQS8 1478 aa21.44■■□□□ 1.02
ERBB2-220ENST00000584684 CCDC18Q5T9S5 1454 aa21.43■■□□□ 1.02
ERBB2-220ENST00000584684 KIF14Q15058 1648 aa21.4■■□□□ 1.02
ERBB2-220ENST00000584684 FRMPD1Q5SYB0 1578 aa21.4■■□□□ 1.02
ERBB2-220ENST00000584684 FANCAO15360 1455 aa21.39■■□□□ 1.02
ERBB2-220ENST00000584684 TROQ12816 1431 aaPredicted RBP21.39■■□□□ 1.02
ERBB2-220ENST00000584684 CDK11AQ9UQ88 783 aaPredicted RBP21.38■■□□□ 1.01
ERBB2-220ENST00000584684 MYO5CQ9NQX4 1742 aa21.37■■□□□ 1.01
ERBB2-220ENST00000584684 ADGRL1O94910 1474 aa21.36■■□□□ 1.01
ERBB2-220ENST00000584684 RICTORQ6R327 1708 aa21.35■■□□□ 1.01
ERBB2-220ENST00000584684 KDM4FA0A1W2PPD8 638 aa21.35■■□□□ 1.01
ERBB2-220ENST00000584684 PLCH2O75038 1416 aa21.35■■□□□ 1.01
ERBB2-220ENST00000584684 ATP1B4Q9UN42 357 aaPredicted RBP21.34■■□□□ 1.01
ERBB2-220ENST00000584684 AKNAQ7Z591 1439 aa21.33■■□□□ 1.01
ERBB2-220ENST00000584684 ZMYM4Q5VZL5 1548 aa21.31■■□□□ 1
ERBB2-220ENST00000584684 DENND4BO75064 1496 aaPredicted RBP21.31■■□□□ 1
ERBB2-220ENST00000584684 CEP162Q5TB80 1403 aa21.3■■□□□ 1
ERBB2-220ENST00000584684 ARHGEF40Q8TER5 1519 aa21.29■■□□□ 1
ERBB2-220ENST00000584684 RAPGEF3O95398 923 aa21.27■■□□□ 1
ERBB2-220ENST00000584684 PREX2Q70Z35 1606 aa21.26■□□□□ 0.99
ERBB2-220ENST00000584684 POGZQ7Z3K3 1410 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms