RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 UBTFP17480 764 aaKnown RBP29.79■■■□□ 2.36
RFFL-211ENST00000584541 OSCARQ8IYS5 282 aa29.77■■■□□ 2.36
RFFL-211ENST00000584541 KIAA0586Q9BVV6 1533 aa29.71■■■□□ 2.35
RFFL-211ENST00000584541 LOC105371045A0A1W2PR82 267 aa29.7■■■□□ 2.35
RFFL-211ENST00000584541 IQGAP2Q13576 1575 aa29.69■■■□□ 2.34
RFFL-211ENST00000584541 CLASP1Q7Z460 1538 aa29.68■■■□□ 2.34
RFFL-211ENST00000584541 TNIKQ9UKE5 1360 aa29.64■■■□□ 2.33
RFFL-211ENST00000584541 SHROOM2Q13796 1616 aa29.55■■■□□ 2.32
RFFL-211ENST00000584541 JPH4Q96JJ6 628 aa29.52■■■□□ 2.32
RFFL-211ENST00000584541 UGGT2Q9NYU1 1516 aa29.5■■■□□ 2.31
RFFL-211ENST00000584541 RANGAP1P46060 587 aaPredicted RBP29.47■■■□□ 2.31
RFFL-211ENST00000584541 EFCAB5A4FU69 1503 aa29.42■■■□□ 2.3
RFFL-211ENST00000584541 CARMIL2Q6F5E8 1435 aa29.42■■■□□ 2.3
RFFL-211ENST00000584541 PRG4Q92954 1404 aaPredicted RBP29.42■■■□□ 2.3
RFFL-211ENST00000584541 SAMD9Q5K651 1589 aa29.4■■■□□ 2.3
RFFL-211ENST00000584541 CEP162Q5TB80 1403 aa29.4■■■□□ 2.3
RFFL-211ENST00000584541 KIAA0556O60303 1618 aa29.38■■■□□ 2.29
RFFL-211ENST00000584541 CLIP1P30622 1438 aa29.38■■■□□ 2.29
RFFL-211ENST00000584541 DISP1Q96F81 1524 aa29.36■■■□□ 2.29
RFFL-211ENST00000584541 ARHGAP35Q9NRY4 1499 aa29.31■■■□□ 2.28
RFFL-211ENST00000584541 ERCC6L2Q5T890 1561 aa29.3■■■□□ 2.28
RFFL-211ENST00000584541 P3H3Q8IVL6 736 aa29.28■■■□□ 2.28
RFFL-211ENST00000584541 ARHGEF11O15085 1522 aa29.28■■■□□ 2.28
RFFL-211ENST00000584541 RIMBP3CA6NJZ7 1639 aa29.24■■■□□ 2.27
RFFL-211ENST00000584541 RIMBP3BA6NNM3 1639 aa29.24■■■□□ 2.27
RFFL-211ENST00000584541 RIMBP3Q9UFD9 1639 aa29.24■■■□□ 2.27
RFFL-211ENST00000584541 FHOD3Q2V2M9 1422 aa29.22■■■□□ 2.27
RFFL-211ENST00000584541 ARAP1Q96P48 1450 aa29.17■■■□□ 2.26
RFFL-211ENST00000584541 PTPRGP23470 1445 aa29.16■■■□□ 2.26
RFFL-211ENST00000584541 TTBK1Q5TCY1 1321 aaPredicted RBP29.16■■■□□ 2.26
RFFL-211ENST00000584541 FMN1Q68DA7 1419 aa29.12■■■□□ 2.25
RFFL-211ENST00000584541 RAPGEF6Q8TEU7 1601 aa29.02■■■□□ 2.24
RFFL-211ENST00000584541 VPS8Q8N3P4 1428 aa29.02■■■□□ 2.24
RFFL-211ENST00000584541 ABCA8O94911 1581 aa29■■■□□ 2.23
RFFL-211ENST00000584541 UACAQ9BZF9 1416 aa28.99■■■□□ 2.23
RFFL-211ENST00000584541 PLB1Q6P1J6 1458 aa28.98■■■□□ 2.23
RFFL-211ENST00000584541 PCF11O94913 1555 aaKnown RBP28.97■■■□□ 2.23
RFFL-211ENST00000584541 CYB5RLQ6IPT4 315 aa28.96■■■□□ 2.23
RFFL-211ENST00000584541 HECW1Q76N89 1606 aa28.95■■■□□ 2.23
RFFL-211ENST00000584541 CASKIN1Q8WXD9 1431 aa28.94■■■□□ 2.22
RFFL-211ENST00000584541 ABCC2Q92887 1545 aa28.94■■■□□ 2.22
RFFL-211ENST00000584541 FYCO1Q9BQS8 1478 aa28.93■■■□□ 2.22
RFFL-211ENST00000584541 UHRF1BP1LA0JNW5 1464 aa28.92■■■□□ 2.22
RFFL-211ENST00000584541 ATP1B4Q9UN42 357 aaPredicted RBP28.91■■■□□ 2.22
RFFL-211ENST00000584541 ADCY10Q96PN6 1610 aa28.9■■■□□ 2.22
RFFL-211ENST00000584541 NUP153P49790 1475 aaKnown RBP28.85■■■□□ 2.21
RFFL-211ENST00000584541 LRRIQ1Q96JM4 1722 aa28.82■■■□□ 2.2
RFFL-211ENST00000584541 CCDC18Q5T9S5 1454 aa28.8■■■□□ 2.2
RFFL-211ENST00000584541 EPRSP07814 1512 aaKnown RBP28.79■■■□□ 2.2
RFFL-211ENST00000584541 NPM1P06748 294 aaKnown RBP eCLIP28.78■■■□□ 2.2
RFFL-211ENST00000584541 ZCCHC11Q5TAX3 1644 aaKnown RBP28.78■■■□□ 2.2
RFFL-211ENST00000584541 KDM5BQ9UGL1 1544 aa28.77■■■□□ 2.2
RFFL-211ENST00000584541 APLP2Q06481 763 aa28.76■■■□□ 2.19
RFFL-211ENST00000584541 ARID3CA6NKF2 412 aa28.75■■■□□ 2.19
RFFL-211ENST00000584541 ATP10BO94823 1461 aa28.74■■■□□ 2.19
RFFL-211ENST00000584541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.74■■■□□ 2.19
RFFL-211ENST00000584541 HNRNPUL2Q1KMD3 747 aaKnown RBP28.74■■■□□ 2.19
RFFL-211ENST00000584541 CFAP43Q8NDM7 1665 aa28.73■■■□□ 2.19
RFFL-211ENST00000584541 CDK13Q14004 1512 aaKnown RBP28.73■■■□□ 2.19
RFFL-211ENST00000584541 TIAM1Q13009 1591 aa28.69■■■□□ 2.18
RFFL-211ENST00000584541 MAP3K1Q13233 1512 aa28.69■■■□□ 2.18
RFFL-211ENST00000584541 CDK11AQ9UQ88 783 aaPredicted RBP28.66■■■□□ 2.18
RFFL-211ENST00000584541 PLEKHD1A6NEE1 506 aa28.6■■■□□ 2.17
RFFL-211ENST00000584541 MAPKBP1O60336 1514 aa28.59■■■□□ 2.17
RFFL-211ENST00000584541 MTUS2Q5JR59 1369 aa28.56■■■□□ 2.16
RFFL-211ENST00000584541 ASXL2Q76L83 1435 aa28.56■■■□□ 2.16
RFFL-211ENST00000584541 EHBP1L1Q8N3D4 1523 aa28.54■■■□□ 2.16
RFFL-211ENST00000584541 LRRC9Q6ZRR7 1453 aa28.53■■■□□ 2.16
RFFL-211ENST00000584541 WDR7Q9Y4E6 1490 aa28.53■■■□□ 2.16
RFFL-211ENST00000584541 TROQ12816 1431 aaPredicted RBP28.52■■■□□ 2.16
RFFL-211ENST00000584541 MAGI3Q5TCQ9 1506 aa28.52■■■□□ 2.16
RFFL-211ENST00000584541 KANK4Q5T7N3 995 aaPredicted RBP28.47■■■□□ 2.15
RFFL-211ENST00000584541 KIF14Q15058 1648 aa28.47■■■□□ 2.15
RFFL-211ENST00000584541 SUPT6HQ7KZ85 1726 aaKnown RBP28.46■■■□□ 2.15
RFFL-211ENST00000584541 KCNH8Q96L42 1107 aa28.43■■■□□ 2.14
RFFL-211ENST00000584541 PPARGC1BQ86YN6 1023 aaKnown RBP28.38■■■□□ 2.13
RFFL-211ENST00000584541 DIP2BQ9P265 1576 aa28.36■■■□□ 2.13
RFFL-211ENST00000584541 ABCC10Q5T3U5 1492 aa28.35■■■□□ 2.13
RFFL-211ENST00000584541 NCOA2Q15596 1464 aa28.34■■■□□ 2.13
RFFL-211ENST00000584541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.33■■■□□ 2.13
RFFL-211ENST00000584541 GLI2P10070 1586 aa28.33■■■□□ 2.13
RFFL-211ENST00000584541 ABCA9Q8IUA7 1624 aa28.33■■■□□ 2.13
RFFL-211ENST00000584541 KIF13AQ9H1H9 1805 aa28.32■■■□□ 2.12
RFFL-211ENST00000584541 TTC37Q6PGP7 1564 aa28.3■■■□□ 2.12
RFFL-211ENST00000584541 MYO5CQ9NQX4 1742 aa28.29■■■□□ 2.12
RFFL-211ENST00000584541 FAM69CQ0P6D2 419 aa28.28■■■□□ 2.12
RFFL-211ENST00000584541 ITSN2Q9NZM3 1697 aa28.28■■■□□ 2.12
RFFL-211ENST00000584541 CCNB3Q8WWL7 1395 aa28.26■■■□□ 2.12
RFFL-211ENST00000584541 CDC42BPAQ5VT25 1732 aa28.26■■■□□ 2.11
RFFL-211ENST00000584541 MAP3K4Q9Y6R4 1608 aa28.25■■■□□ 2.11
RFFL-211ENST00000584541 PREX2Q70Z35 1606 aa28.21■■■□□ 2.11
RFFL-211ENST00000584541 TRHP20396 242 aaPredicted RBP28.21■■■□□ 2.11
RFFL-211ENST00000584541 CD109Q6YHK3 1445 aa28.2■■■□□ 2.11
RFFL-211ENST00000584541 GPATCH8Q9UKJ3 1502 aaKnown RBP28.18■■■□□ 2.1
RFFL-211ENST00000584541 CDC42BPBQ9Y5S2 1711 aa28.18■■■□□ 2.1
RFFL-211ENST00000584541 TSPOAP1O95153 1857 aa28.18■■■□□ 2.1
RFFL-211ENST00000584541 MYOM3Q5VTT5 1437 aa28.18■■■□□ 2.1
RFFL-211ENST00000584541 PHLDB1Q86UU1 1377 aa28.17■■■□□ 2.1
RFFL-211ENST00000584541 ARAP3Q8WWN8 1544 aa28.16■■■□□ 2.1
RFFL-211ENST00000584541 PLCH2O75038 1416 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms