RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
IFT20-213ENST00000583796 GRIN2BQ13224 1484 aa15.98■□□□□ 0.15
IFT20-213ENST00000583796 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
IFT20-213ENST00000583796 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.14
IFT20-213ENST00000583796 EFCAB5A4FU69 1503 aa15.95■□□□□ 0.14
IFT20-213ENST00000583796 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
IFT20-213ENST00000583796 ARAP1Q96P48 1450 aa15.94■□□□□ 0.14
IFT20-213ENST00000583796 PCGF6Q9BYE7 350 aa15.93■□□□□ 0.14
IFT20-213ENST00000583796 ARHGAP35Q9NRY4 1499 aa15.93■□□□□ 0.14
IFT20-213ENST00000583796 EIF4G3O43432 1585 aaKnown RBP15.91■□□□□ 0.14
IFT20-213ENST00000583796 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.13
IFT20-213ENST00000583796 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
IFT20-213ENST00000583796 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
IFT20-213ENST00000583796 MAGI1Q96QZ7 1491 aaPredicted RBP15.88■□□□□ 0.13
IFT20-213ENST00000583796 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
IFT20-213ENST00000583796 APLP2Q06481 763 aa15.84■□□□□ 0.13
IFT20-213ENST00000583796 MAP3K1Q13233 1512 aa15.83■□□□□ 0.13
IFT20-213ENST00000583796 SAMD9Q5K651 1589 aa15.82■□□□□ 0.12
IFT20-213ENST00000583796 SNAPC4Q5SXM2 1469 aa15.8■□□□□ 0.12
IFT20-213ENST00000583796 IQGAP2Q13576 1575 aa15.79■□□□□ 0.12
IFT20-213ENST00000583796 RANGAP1P46060 587 aaPredicted RBP15.78■□□□□ 0.12
IFT20-213ENST00000583796 SYNJ2O15056 1496 aa15.77■□□□□ 0.12
IFT20-213ENST00000583796 GRIN2AQ12879 1464 aa15.77■□□□□ 0.12
IFT20-213ENST00000583796 FMN1Q68DA7 1419 aa15.77■□□□□ 0.12
IFT20-213ENST00000583796 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
IFT20-213ENST00000583796 KIAA0586Q9BVV6 1533 aa15.74■□□□□ 0.11
IFT20-213ENST00000583796 UGGT2Q9NYU1 1516 aa15.73■□□□□ 0.11
IFT20-213ENST00000583796 TIAM1Q13009 1591 aa15.72■□□□□ 0.11
IFT20-213ENST00000583796 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
IFT20-213ENST00000583796 CFAP43Q8NDM7 1665 aa15.71■□□□□ 0.11
IFT20-213ENST00000583796 PCF11O94913 1555 aaKnown RBP15.71■□□□□ 0.11
IFT20-213ENST00000583796 FHOD3Q2V2M9 1422 aa15.7■□□□□ 0.1
IFT20-213ENST00000583796 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
IFT20-213ENST00000583796 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
IFT20-213ENST00000583796 NUP160Q12769 1436 aa15.68■□□□□ 0.1
IFT20-213ENST00000583796 HRCP23327 699 aa15.64■□□□□ 0.09
IFT20-213ENST00000583796 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
IFT20-213ENST00000583796 CEP170Q5SW79 1584 aa15.63■□□□□ 0.09
IFT20-213ENST00000583796 LRRC9Q6ZRR7 1453 aa15.62■□□□□ 0.09
IFT20-213ENST00000583796 KIAA0556O60303 1618 aa15.62■□□□□ 0.09
IFT20-213ENST00000583796 CCDC18Q5T9S5 1454 aa15.6■□□□□ 0.09
IFT20-213ENST00000583796 HECW1Q76N89 1606 aa15.59■□□□□ 0.09
IFT20-213ENST00000583796 RRBP1Q9P2E9 1410 aaKnown RBP15.58■□□□□ 0.09
IFT20-213ENST00000583796 DISP1Q96F81 1524 aa15.58■□□□□ 0.08
IFT20-213ENST00000583796 P3H3Q8IVL6 736 aa15.57■□□□□ 0.08
IFT20-213ENST00000583796 KANK4Q5T7N3 995 aaPredicted RBP15.56■□□□□ 0.08
IFT20-213ENST00000583796 TTBK1Q5TCY1 1321 aaPredicted RBP15.55■□□□□ 0.08
IFT20-213ENST00000583796 CARMIL2Q6F5E8 1435 aa15.55■□□□□ 0.08
IFT20-213ENST00000583796 ZEB1P37275 1124 aaPredicted RBP15.53■□□□□ 0.08
IFT20-213ENST00000583796 CHD1O14646 1710 aa15.52■□□□□ 0.07
IFT20-213ENST00000583796 EHBP1L1Q8N3D4 1523 aa15.52■□□□□ 0.07
IFT20-213ENST00000583796 LRRIQ1Q96JM4 1722 aa15.51■□□□□ 0.07
IFT20-213ENST00000583796 CCNB3Q8WWL7 1395 aa15.49■□□□□ 0.07
IFT20-213ENST00000583796 FBLN2P98095 1184 aa15.49■□□□□ 0.07
IFT20-213ENST00000583796 RAPGEF6Q8TEU7 1601 aa15.48■□□□□ 0.07
IFT20-213ENST00000583796 EPRSP07814 1512 aaKnown RBP15.47■□□□□ 0.07
IFT20-213ENST00000583796 SHROOM2Q13796 1616 aa15.47■□□□□ 0.07
IFT20-213ENST00000583796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.07
IFT20-213ENST00000583796 SUPT6HQ7KZ85 1726 aaKnown RBP15.47■□□□□ 0.07
IFT20-213ENST00000583796 JPH4Q96JJ6 628 aa15.46■□□□□ 0.07
IFT20-213ENST00000583796 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.07
IFT20-213ENST00000583796 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
IFT20-213ENST00000583796 ATP1B4Q9UN42 357 aaPredicted RBP15.43■□□□□ 0.06
IFT20-213ENST00000583796 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
IFT20-213ENST00000583796 NUP153P49790 1475 aaKnown RBP15.41■□□□□ 0.06
IFT20-213ENST00000583796 PHLDB1Q86UU1 1377 aa15.41■□□□□ 0.06
IFT20-213ENST00000583796 CLASP1Q7Z460 1538 aa15.39■□□□□ 0.05
IFT20-213ENST00000583796 NCOA2Q15596 1464 aa15.39■□□□□ 0.05
IFT20-213ENST00000583796 ABCA8O94911 1581 aa15.39■□□□□ 0.05
IFT20-213ENST00000583796 PRG4Q92954 1404 aaPredicted RBP15.38■□□□□ 0.05
IFT20-213ENST00000583796 MYOM3Q5VTT5 1437 aa15.37■□□□□ 0.05
IFT20-213ENST00000583796 FGD6Q6ZV73 1430 aa15.37■□□□□ 0.05
IFT20-213ENST00000583796 MAGI3Q5TCQ9 1506 aa15.36■□□□□ 0.05
IFT20-213ENST00000583796 CDK13Q14004 1512 aaKnown RBP15.36■□□□□ 0.05
IFT20-213ENST00000583796 CDK11AQ9UQ88 783 aaPredicted RBP15.35■□□□□ 0.05
IFT20-213ENST00000583796 HOXD11P31277 338 aaPredicted RBP15.33■□□□□ 0.05
IFT20-213ENST00000583796 HNRNPUL2Q1KMD3 747 aaKnown RBP15.33■□□□□ 0.05
IFT20-213ENST00000583796 PLB1Q6P1J6 1458 aa15.33■□□□□ 0.05
IFT20-213ENST00000583796 MIA2Q96PC5 1412 aa15.33■□□□□ 0.04
IFT20-213ENST00000583796 ADCY10Q96PN6 1610 aa15.33■□□□□ 0.04
IFT20-213ENST00000583796 CCER1Q8TC90 406 aaPredicted RBP15.33■□□□□ 0.04
IFT20-213ENST00000583796 PTPRGP23470 1445 aa15.31■□□□□ 0.04
IFT20-213ENST00000583796 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
IFT20-213ENST00000583796 TCOF1Q13428 1488 aaKnown RBP15.3■□□□□ 0.04
IFT20-213ENST00000583796 CLSPNQ9HAW4 1339 aa15.29■□□□□ 0.04
IFT20-213ENST00000583796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
IFT20-213ENST00000583796 PTPN23Q9H3S7 1636 aa15.28■□□□□ 0.04
IFT20-213ENST00000583796 ITSN2Q9NZM3 1697 aa15.27■□□□□ 0.03
IFT20-213ENST00000583796 UACAQ9BZF9 1416 aa15.26■□□□□ 0.03
IFT20-213ENST00000583796 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
IFT20-213ENST00000583796 ABCC2Q92887 1545 aa15.24■□□□□ 0.03
IFT20-213ENST00000583796 ATP10BO94823 1461 aa15.24■□□□□ 0.03
IFT20-213ENST00000583796 KIF14Q15058 1648 aa15.23■□□□□ 0.03
IFT20-213ENST00000583796 FAM50AQ14320 339 aaKnown RBP15.23■□□□□ 0.03
IFT20-213ENST00000583796 UHRF1BP1LA0JNW5 1464 aa15.23■□□□□ 0.03
IFT20-213ENST00000583796 AKNAQ7Z591 1439 aa15.21■□□□□ 0.03
IFT20-213ENST00000583796 SETD5Q9C0A6 1442 aa15.21■□□□□ 0.03
IFT20-213ENST00000583796 NCBP3Q53F19 620 aaKnown RBP15.2■□□□□ 0.02
IFT20-213ENST00000583796 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
IFT20-213ENST00000583796 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms