RNA–Protein interactions for RNA: ENST00000583340.1

SUPT6H-208, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-208ENST00000583340 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
SUPT6H-208ENST00000583340 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
SUPT6H-208ENST00000583340 EEA1Q15075 1411 aa14.3□□□□□ -0.12
SUPT6H-208ENST00000583340 PRG4Q92954 1404 aaPredicted RBP14.28□□□□□ -0.12
SUPT6H-208ENST00000583340 CARMIL2Q6F5E8 1435 aa14.23□□□□□ -0.13
SUPT6H-208ENST00000583340 IQGAP2Q13576 1575 aa14.22□□□□□ -0.13
SUPT6H-208ENST00000583340 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
SUPT6H-208ENST00000583340 PRXQ9BXM0 1461 aa14.21□□□□□ -0.13
SUPT6H-208ENST00000583340 CHIC1Q5VXU3 224 aa14.21□□□□□ -0.13
SUPT6H-208ENST00000583340 ERCC6L2Q5T890 1561 aa14.21□□□□□ -0.14
SUPT6H-208ENST00000583340 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
SUPT6H-208ENST00000583340 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
SUPT6H-208ENST00000583340 FAM9AQ8IZU1 332 aaPredicted RBP14.14□□□□□ -0.15
SUPT6H-208ENST00000583340 UGGT2Q9NYU1 1516 aa14.14□□□□□ -0.15
SUPT6H-208ENST00000583340 GOLGA3Q08378 1498 aa14.13□□□□□ -0.15
SUPT6H-208ENST00000583340 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
SUPT6H-208ENST00000583340 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
SUPT6H-208ENST00000583340 PTPRGP23470 1445 aa14.13□□□□□ -0.15
SUPT6H-208ENST00000583340 DISP1Q96F81 1524 aa14.08□□□□□ -0.16
SUPT6H-208ENST00000583340 KIF21BO75037 1637 aa14.08□□□□□ -0.16
SUPT6H-208ENST00000583340 TTBK1Q5TCY1 1321 aaPredicted RBP14.07□□□□□ -0.16
SUPT6H-208ENST00000583340 KIAA0556O60303 1618 aa14.07□□□□□ -0.16
SUPT6H-208ENST00000583340 UACAQ9BZF9 1416 aa14.03□□□□□ -0.16
SUPT6H-208ENST00000583340 ADCY10Q96PN6 1610 aa14.02□□□□□ -0.16
SUPT6H-208ENST00000583340 UHRF1BP1LA0JNW5 1464 aa14.02□□□□□ -0.16
SUPT6H-208ENST00000583340 UBTFP17480 764 aaKnown RBP14□□□□□ -0.17
SUPT6H-208ENST00000583340 MAPKBP1O60336 1514 aa14□□□□□ -0.17
SUPT6H-208ENST00000583340 ABCC2Q92887 1545 aa14□□□□□ -0.17
SUPT6H-208ENST00000583340 SAMD9Q5K651 1589 aa13.95□□□□□ -0.18
SUPT6H-208ENST00000583340 EFCAB5A4FU69 1503 aa13.95□□□□□ -0.18
SUPT6H-208ENST00000583340 PLB1Q6P1J6 1458 aa13.94□□□□□ -0.18
SUPT6H-208ENST00000583340 ABCC10Q5T3U5 1492 aa13.93□□□□□ -0.18
SUPT6H-208ENST00000583340 RANGAP1P46060 587 aaPredicted RBP13.93□□□□□ -0.18
SUPT6H-208ENST00000583340 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
SUPT6H-208ENST00000583340 FAM69CQ0P6D2 419 aa13.92□□□□□ -0.18
SUPT6H-208ENST00000583340 P3H3Q8IVL6 736 aa13.92□□□□□ -0.18
SUPT6H-208ENST00000583340 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
SUPT6H-208ENST00000583340 ABCA8O94911 1581 aa13.91□□□□□ -0.18
SUPT6H-208ENST00000583340 ASXL2Q76L83 1435 aa13.9□□□□□ -0.18
SUPT6H-208ENST00000583340 DIP2BQ9P265 1576 aa13.88□□□□□ -0.19
SUPT6H-208ENST00000583340 ZCCHC11Q5TAX3 1644 aaKnown RBP13.87□□□□□ -0.19
SUPT6H-208ENST00000583340 FHOD3Q2V2M9 1422 aa13.87□□□□□ -0.19
SUPT6H-208ENST00000583340 KIF13AQ9H1H9 1805 aa13.87□□□□□ -0.19
SUPT6H-208ENST00000583340 RAPGEF6Q8TEU7 1601 aa13.85□□□□□ -0.19
SUPT6H-208ENST00000583340 WDR7Q9Y4E6 1490 aa13.85□□□□□ -0.19
SUPT6H-208ENST00000583340 FMN1Q68DA7 1419 aa13.84□□□□□ -0.19
SUPT6H-208ENST00000583340 GLI2P10070 1586 aa13.83□□□□□ -0.2
SUPT6H-208ENST00000583340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
SUPT6H-208ENST00000583340 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
SUPT6H-208ENST00000583340 EPRSP07814 1512 aaKnown RBP13.81□□□□□ -0.2
SUPT6H-208ENST00000583340 ARHGAP35Q9NRY4 1499 aa13.8□□□□□ -0.2
SUPT6H-208ENST00000583340 ATP10BO94823 1461 aa13.79□□□□□ -0.2
SUPT6H-208ENST00000583340 TEX14Q8IWB6 1497 aa13.78□□□□□ -0.2
SUPT6H-208ENST00000583340 ARID3CA6NKF2 412 aa13.77□□□□□ -0.21
SUPT6H-208ENST00000583340 NUP153P49790 1475 aaKnown RBP13.77□□□□□ -0.21
SUPT6H-208ENST00000583340 CLIP1P30622 1438 aa13.76□□□□□ -0.21
SUPT6H-208ENST00000583340 KCNH8Q96L42 1107 aa13.76□□□□□ -0.21
SUPT6H-208ENST00000583340 HECW1Q76N89 1606 aa13.75□□□□□ -0.21
SUPT6H-208ENST00000583340 PLEKHD1A6NEE1 506 aa13.75□□□□□ -0.21
SUPT6H-208ENST00000583340 CDK11AQ9UQ88 783 aaPredicted RBP13.75□□□□□ -0.21
SUPT6H-208ENST00000583340 TSPOAP1O95153 1857 aa13.75□□□□□ -0.21
SUPT6H-208ENST00000583340 ATP1B4Q9UN42 357 aaPredicted RBP13.74□□□□□ -0.21
SUPT6H-208ENST00000583340 MAP3K4Q9Y6R4 1608 aa13.73□□□□□ -0.21
SUPT6H-208ENST00000583340 CD109Q6YHK3 1445 aa13.73□□□□□ -0.21
SUPT6H-208ENST00000583340 CFAP43Q8NDM7 1665 aa13.72□□□□□ -0.21
SUPT6H-208ENST00000583340 KDM6BO15054 1643 aa13.71□□□□□ -0.22
SUPT6H-208ENST00000583340 MAGI3Q5TCQ9 1506 aa13.69□□□□□ -0.22
SUPT6H-208ENST00000583340 CASKIN1Q8WXD9 1431 aa13.69□□□□□ -0.22
SUPT6H-208ENST00000583340 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
SUPT6H-208ENST00000583340 PHLDB1Q86UU1 1377 aa13.67□□□□□ -0.22
SUPT6H-208ENST00000583340 FYCO1Q9BQS8 1478 aa13.67□□□□□ -0.22
SUPT6H-208ENST00000583340 PPRC1Q5VV67 1664 aaKnown RBP13.66□□□□□ -0.22
SUPT6H-208ENST00000583340 CEP162Q5TB80 1403 aa13.66□□□□□ -0.22
SUPT6H-208ENST00000583340 CDK13Q14004 1512 aaKnown RBP13.66□□□□□ -0.22
SUPT6H-208ENST00000583340 ABCA9Q8IUA7 1624 aa13.66□□□□□ -0.22
SUPT6H-208ENST00000583340 PCF11O94913 1555 aaKnown RBP13.63□□□□□ -0.23
SUPT6H-208ENST00000583340 TROQ12816 1431 aaPredicted RBP13.61□□□□□ -0.23
SUPT6H-208ENST00000583340 NEO1Q92859 1461 aa13.61□□□□□ -0.23
SUPT6H-208ENST00000583340 KIF14Q15058 1648 aa13.6□□□□□ -0.23
SUPT6H-208ENST00000583340 CFAP74Q9C0B2 1584 aa13.59□□□□□ -0.23
SUPT6H-208ENST00000583340 LOC105371045A0A1W2PR82 267 aa13.59□□□□□ -0.23
SUPT6H-208ENST00000583340 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.58□□□□□ -0.24
SUPT6H-208ENST00000583340 ARAP3Q8WWN8 1544 aa13.57□□□□□ -0.24
SUPT6H-208ENST00000583340 TTC37Q6PGP7 1564 aa13.55□□□□□ -0.24
SUPT6H-208ENST00000583340 FANCAO15360 1455 aa13.55□□□□□ -0.24
SUPT6H-208ENST00000583340 PLCH2O75038 1416 aa13.54□□□□□ -0.24
SUPT6H-208ENST00000583340 EFCAB2Q5VUJ9 269 aa13.53□□□□□ -0.24
SUPT6H-208ENST00000583340 MTUS2Q5JR59 1369 aa13.53□□□□□ -0.24
SUPT6H-208ENST00000583340 COL17A1Q9UMD9 1497 aaPredicted RBP13.53□□□□□ -0.24
SUPT6H-208ENST00000583340 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
SUPT6H-208ENST00000583340 AKNAQ7Z591 1439 aa13.52□□□□□ -0.25
SUPT6H-208ENST00000583340 VPS8Q8N3P4 1428 aa13.52□□□□□ -0.25
SUPT6H-208ENST00000583340 MYO5CQ9NQX4 1742 aa13.52□□□□□ -0.25
SUPT6H-208ENST00000583340 DENND4BO75064 1496 aaPredicted RBP13.51□□□□□ -0.25
SUPT6H-208ENST00000583340 AEBP2Q6ZN18 517 aaPredicted RBP13.5□□□□□ -0.25
SUPT6H-208ENST00000583340 ARHGAP5Q13017 1502 aa13.49□□□□□ -0.25
SUPT6H-208ENST00000583340 ADGRL1O94910 1474 aa13.48□□□□□ -0.25
SUPT6H-208ENST00000583340 EHBP1L1Q8N3D4 1523 aa13.48□□□□□ -0.25
SUPT6H-208ENST00000583340 APLP2Q06481 763 aa13.47□□□□□ -0.25
SUPT6H-208ENST00000583340 RAPGEF3O95398 923 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms