RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 CUX2O14529 1486 aa14.91□□□□□ -0.02
TOP3A-214ENST00000582981 RRBP1Q9P2E9 1410 aaKnown RBP14.91□□□□□ -0.02
TOP3A-214ENST00000582981 PHLDB1Q86UU1 1377 aa14.88□□□□□ -0.03
TOP3A-214ENST00000582981 ERICH3Q5RHP9 1530 aa14.87□□□□□ -0.03
TOP3A-214ENST00000582981 MSH5O43196 834 aa14.86□□□□□ -0.03
TOP3A-214ENST00000582981 NEFLP07196 543 aa14.85□□□□□ -0.03
TOP3A-214ENST00000582981 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
TOP3A-214ENST00000582981 IGF1RP08069 1367 aa14.84□□□□□ -0.03
TOP3A-214ENST00000582981 MAPKBP1O60336 1514 aa14.83□□□□□ -0.03
TOP3A-214ENST00000582981 WDR97A6NE52 1622 aa14.83□□□□□ -0.04
TOP3A-214ENST00000582981 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
TOP3A-214ENST00000582981 IRX6P78412 446 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-214ENST00000582981 ANO8Q9HCE9 1232 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-214ENST00000582981 CARMIL1Q5VZK9 1371 aa14.82□□□□□ -0.04
TOP3A-214ENST00000582981 ARID3CA6NKF2 412 aa14.81□□□□□ -0.04
TOP3A-214ENST00000582981 SETD5Q9C0A6 1442 aa14.8□□□□□ -0.04
TOP3A-214ENST00000582981 FHOD3Q2V2M9 1422 aa14.8□□□□□ -0.04
TOP3A-214ENST00000582981 CNGB1Q14028 1251 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-214ENST00000582981 DEKP35659 375 aaKnown RBP14.75□□□□□ -0.05
TOP3A-214ENST00000582981 CFTRP13569 1480 aa14.75□□□□□ -0.05
TOP3A-214ENST00000582981 CHIC2Q9UKJ5 165 aa14.74□□□□□ -0.05
TOP3A-214ENST00000582981 LRRC9Q6ZRR7 1453 aa14.74□□□□□ -0.05
TOP3A-214ENST00000582981 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
TOP3A-214ENST00000582981 ANP32CO43423 234 aa14.73□□□□□ -0.05
TOP3A-214ENST00000582981 TIAM1Q13009 1591 aa14.73□□□□□ -0.05
TOP3A-214ENST00000582981 PPP1R15AO75807 674 aaPredicted RBP14.72□□□□□ -0.05
TOP3A-214ENST00000582981 SENP3-EIF4A1A0A087X0R7 540 aa14.71□□□□□ -0.05
TOP3A-214ENST00000582981 RAD54L2Q9Y4B4 1467 aa14.71□□□□□ -0.05
TOP3A-214ENST00000582981 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
TOP3A-214ENST00000582981 RRP7BPQ9NSQ0 103 aa14.68□□□□□ -0.06
TOP3A-214ENST00000582981 TONSLQ96HA7 1378 aa14.68□□□□□ -0.06
TOP3A-214ENST00000582981 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
TOP3A-214ENST00000582981 CCDC136Q96JN2 1154 aa14.67□□□□□ -0.06
TOP3A-214ENST00000582981 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
TOP3A-214ENST00000582981 PCF11O94913 1555 aaKnown RBP14.66□□□□□ -0.06
TOP3A-214ENST00000582981 HNRNPUQ00839 825 aaKnown RBP eCLIP14.66□□□□□ -0.06
TOP3A-214ENST00000582981 NBR1Q14596 966 aa14.66□□□□□ -0.06
TOP3A-214ENST00000582981 FOXD1Q16676 465 aa14.66□□□□□ -0.06
TOP3A-214ENST00000582981 CADPSQ9ULU8 1353 aa14.64□□□□□ -0.07
TOP3A-214ENST00000582981 SALL2Q9Y467 1007 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-214ENST00000582981 CDK11AQ9UQ88 783 aaPredicted RBP14.63□□□□□ -0.07
TOP3A-214ENST00000582981 MTUS2Q5JR59 1369 aa14.62□□□□□ -0.07
TOP3A-214ENST00000582981 PTPRKQ15262 1439 aa14.6□□□□□ -0.07
TOP3A-214ENST00000582981 FHAD1B1AJZ9 1412 aa14.6□□□□□ -0.07
TOP3A-214ENST00000582981 CCDC184Q52MB2 194 aa14.59□□□□□ -0.07
TOP3A-214ENST00000582981 NESP48681 1621 aa14.59□□□□□ -0.07
TOP3A-214ENST00000582981 TDRD9Q8NDG6 1382 aaKnown RBP14.59□□□□□ -0.07
TOP3A-214ENST00000582981 FANCIQ9NVI1 1328 aa14.59□□□□□ -0.07
TOP3A-214ENST00000582981 RTN4Q9NQC3 1192 aaKnown RBP14.58□□□□□ -0.08
TOP3A-214ENST00000582981 POLR3GLQ9BT43 218 aa14.57□□□□□ -0.08
TOP3A-214ENST00000582981 MYT1LQ9UL68 1186 aa14.56□□□□□ -0.08
TOP3A-214ENST00000582981 AQRO60306 1485 aaKnown RBP eCLIP14.56□□□□□ -0.081e-6■■■■□ 26.1
TOP3A-214ENST00000582981 FAM9BQ8IZU0 186 aa14.55□□□□□ -0.08
TOP3A-214ENST00000582981 CCDC18Q5T9S5 1454 aa14.55□□□□□ -0.08
TOP3A-214ENST00000582981 FANCD2Q9BXW9 1451 aa14.55□□□□□ -0.08
TOP3A-214ENST00000582981 HSPA5P11021 654 aaKnown RBP14.54□□□□□ -0.08
TOP3A-214ENST00000582981 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.54□□□□□ -0.08
TOP3A-214ENST00000582981 FGD6Q6ZV73 1430 aa14.53□□□□□ -0.08
TOP3A-214ENST00000582981 CCER2I3L3R5 266 aa14.51□□□□□ -0.09
TOP3A-214ENST00000582981 WASHC2AQ641Q2 1341 aa14.5□□□□□ -0.09
TOP3A-214ENST00000582981 POLA1P09884 1462 aaPredicted RBP14.49□□□□□ -0.09
TOP3A-214ENST00000582981 C11orf95C9JLR9 678 aaPredicted RBP14.48□□□□□ -0.09
TOP3A-214ENST00000582981 ZNF326Q5BKZ1 582 aaKnown RBP14.48□□□□□ -0.09
TOP3A-214ENST00000582981 CASKIN1Q8WXD9 1431 aa14.47□□□□□ -0.09
TOP3A-214ENST00000582981 MAP3K1Q13233 1512 aa14.46□□□□□ -0.09
TOP3A-214ENST00000582981 IL27Q8NEV9 243 aa14.46□□□□□ -0.09
TOP3A-214ENST00000582981 B4GALNT3Q6L9W6 998 aa14.45□□□□□ -0.1
TOP3A-214ENST00000582981 CFAP43Q8NDM7 1665 aa14.45□□□□□ -0.1
TOP3A-214ENST00000582981 NAIPQ13075 1403 aa14.45□□□□□ -0.1
TOP3A-214ENST00000582981 FYCO1Q9BQS8 1478 aa14.45□□□□□ -0.1
TOP3A-214ENST00000582981 L3MBTL2Q969R5 705 aa14.44□□□□□ -0.1
TOP3A-214ENST00000582981 NCOA2Q15596 1464 aa14.44□□□□□ -0.1
TOP3A-214ENST00000582981 TIMELESSQ9UNS1 1208 aa14.43□□□□□ -0.1
TOP3A-214ENST00000582981 RTL5Q5HYW3 569 aaPredicted RBP14.43□□□□□ -0.1
TOP3A-214ENST00000582981 TOPBP1Q92547 1522 aa14.43□□□□□ -0.1
TOP3A-214ENST00000582981 MRS2Q9HD23 443 aa14.43□□□□□ -0.1
TOP3A-214ENST00000582981 UACAQ9BZF9 1416 aa14.43□□□□□ -0.1
TOP3A-214ENST00000582981 NOP58Q9Y2X3 529 aaKnown RBP14.42□□□□□ -0.1
TOP3A-214ENST00000582981 HFM1A2PYH4 1435 aa14.41□□□□□ -0.1
TOP3A-214ENST00000582981 PAK3O75914 559 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-214ENST00000582981 EIF4G2P78344 907 aaKnown RBP eCLIP14.4□□□□□ -0.1
TOP3A-214ENST00000582981 FMN1Q68DA7 1419 aa14.4□□□□□ -0.1
TOP3A-214ENST00000582981 ZNF644Q9H582 1327 aaPredicted RBP14.4□□□□□ -0.1
TOP3A-214ENST00000582981 PTPN23Q9H3S7 1636 aa14.39□□□□□ -0.11
TOP3A-214ENST00000582981 SNAPC4Q5SXM2 1469 aa14.39□□□□□ -0.11
TOP3A-214ENST00000582981 MYOM3Q5VTT5 1437 aa14.39□□□□□ -0.11
TOP3A-214ENST00000582981 MPHOSPH9Q99550 1183 aa14.38□□□□□ -0.11
TOP3A-214ENST00000582981 NBPF8Q3BBV2 869 aa14.38□□□□□ -0.11
TOP3A-214ENST00000582981 ERICH6BQ5W0A0 696 aa14.38□□□□□ -0.11
TOP3A-214ENST00000582981 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
TOP3A-214ENST00000582981 EIF5BO60841 1220 aaKnown RBP14.36□□□□□ -0.11
TOP3A-214ENST00000582981 ZNF777Q9ULD5 760 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-214ENST00000582981 KDM6BO15054 1643 aa14.35□□□□□ -0.11
TOP3A-214ENST00000582981 MAGI3Q5TCQ9 1506 aa14.34□□□□□ -0.11
TOP3A-214ENST00000582981 DNMBPQ6XZF7 1577 aa14.33□□□□□ -0.12
TOP3A-214ENST00000582981 PRKRIP1Q9H875 184 aaPredicted RBP14.33□□□□□ -0.12
TOP3A-214ENST00000582981 PRDM2Q13029 1718 aa14.33□□□□□ -0.12
TOP3A-214ENST00000582981 SLC4A1APQ9BWU0 796 aaKnown RBP14.32□□□□□ -0.12
TOP3A-214ENST00000582981 CDK13Q14004 1512 aaKnown RBP14.32□□□□□ -0.12
TOP3A-214ENST00000582981 KDM5BQ9UGL1 1544 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms