RNA–Protein interactions for RNA: ENST00000582951.5

CUEDC1-211, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-211ENST00000582951 ARHGAP35Q9NRY4 1499 aa24.76■■□□□ 1.55
CUEDC1-211ENST00000582951 EFCAB5A4FU69 1503 aa24.74■■□□□ 1.55
CUEDC1-211ENST00000582951 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
CUEDC1-211ENST00000582951 SYNJ2O15056 1496 aa24.7■■□□□ 1.54
CUEDC1-211ENST00000582951 GRIN2AQ12879 1464 aa24.69■■□□□ 1.54
CUEDC1-211ENST00000582951 IQGAP2Q13576 1575 aa24.66■■□□□ 1.54
CUEDC1-211ENST00000582951 SAMD9Q5K651 1589 aa24.63■■□□□ 1.53
CUEDC1-211ENST00000582951 KIAA0586Q9BVV6 1533 aa24.56■■□□□ 1.52
CUEDC1-211ENST00000582951 CHMP7Q8WUX9 453 aaPredicted RBP24.54■■□□□ 1.52
CUEDC1-211ENST00000582951 CEP170Q5SW79 1584 aa24.54■■□□□ 1.52
CUEDC1-211ENST00000582951 UGGT2Q9NYU1 1516 aa24.53■■□□□ 1.52
CUEDC1-211ENST00000582951 TRIM26Q12899 539 aaPredicted RBP24.53■■□□□ 1.52
CUEDC1-211ENST00000582951 NUP160Q12769 1436 aa24.52■■□□□ 1.52
CUEDC1-211ENST00000582951 CHD1O14646 1710 aa24.5■■□□□ 1.51
CUEDC1-211ENST00000582951 FHOD3Q2V2M9 1422 aa24.5■■□□□ 1.51
CUEDC1-211ENST00000582951 APLP2Q06481 763 aa24.48■■□□□ 1.51
CUEDC1-211ENST00000582951 PCF11O94913 1555 aaKnown RBP24.47■■□□□ 1.51
CUEDC1-211ENST00000582951 FMN1Q68DA7 1419 aa24.45■■□□□ 1.51
CUEDC1-211ENST00000582951 FBLN2P98095 1184 aa24.43■■□□□ 1.5
CUEDC1-211ENST00000582951 PCGF6Q9BYE7 350 aa24.43■■□□□ 1.5
CUEDC1-211ENST00000582951 FYCO1Q9BQS8 1478 aa24.43■■□□□ 1.5
CUEDC1-211ENST00000582951 PPARGC1BQ86YN6 1023 aaKnown RBP24.42■■□□□ 1.5
CUEDC1-211ENST00000582951 MAP3K1Q13233 1512 aa24.41■■□□□ 1.5
CUEDC1-211ENST00000582951 P3H3Q8IVL6 736 aa24.41■■□□□ 1.5
CUEDC1-211ENST00000582951 KIAA0556O60303 1618 aa24.41■■□□□ 1.5
CUEDC1-211ENST00000582951 CFAP43Q8NDM7 1665 aa24.4■■□□□ 1.5
CUEDC1-211ENST00000582951 CASKIN1Q8WXD9 1431 aa24.39■■□□□ 1.5
CUEDC1-211ENST00000582951 TIAM1Q13009 1591 aa24.37■■□□□ 1.49
CUEDC1-211ENST00000582951 DISP1Q96F81 1524 aa24.35■■□□□ 1.49
CUEDC1-211ENST00000582951 HECW1Q76N89 1606 aa24.28■■□□□ 1.48
CUEDC1-211ENST00000582951 CARMIL2Q6F5E8 1435 aa24.27■■□□□ 1.48
CUEDC1-211ENST00000582951 TTBK1Q5TCY1 1321 aaPredicted RBP24.26■■□□□ 1.47
CUEDC1-211ENST00000582951 SHROOM2Q13796 1616 aa24.24■■□□□ 1.47
CUEDC1-211ENST00000582951 LRRIQ1Q96JM4 1722 aa24.24■■□□□ 1.47
CUEDC1-211ENST00000582951 LRRC9Q6ZRR7 1453 aa24.21■■□□□ 1.47
CUEDC1-211ENST00000582951 JPH4Q96JJ6 628 aa24.21■■□□□ 1.47
CUEDC1-211ENST00000582951 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.46
CUEDC1-211ENST00000582951 CCDC18Q5T9S5 1454 aa24.19■■□□□ 1.46
CUEDC1-211ENST00000582951 KANK4Q5T7N3 995 aaPredicted RBP24.19■■□□□ 1.46
CUEDC1-211ENST00000582951 RAPGEF6Q8TEU7 1601 aa24.17■■□□□ 1.46
CUEDC1-211ENST00000582951 ATP1B4Q9UN42 357 aaPredicted RBP24.16■■□□□ 1.46
CUEDC1-211ENST00000582951 PRG4Q92954 1404 aaPredicted RBP24.12■■□□□ 1.45
CUEDC1-211ENST00000582951 EPRSP07814 1512 aaKnown RBP24.1■■□□□ 1.45
CUEDC1-211ENST00000582951 EHBP1L1Q8N3D4 1523 aa24.09■■□□□ 1.45
CUEDC1-211ENST00000582951 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
CUEDC1-211ENST00000582951 NUP153P49790 1475 aaKnown RBP24.04■■□□□ 1.44
CUEDC1-211ENST00000582951 ABCA8O94911 1581 aa24.03■■□□□ 1.44
CUEDC1-211ENST00000582951 RRBP1Q9P2E9 1410 aaKnown RBP24.03■■□□□ 1.44
CUEDC1-211ENST00000582951 SUPT6HQ7KZ85 1726 aaKnown RBP24.03■■□□□ 1.44
CUEDC1-211ENST00000582951 MTUS2Q5JR59 1369 aa24.03■■□□□ 1.44
CUEDC1-211ENST00000582951 CDK13Q14004 1512 aaKnown RBP24.02■■□□□ 1.44
CUEDC1-211ENST00000582951 PLB1Q6P1J6 1458 aa24■■□□□ 1.43
CUEDC1-211ENST00000582951 PTPRGP23470 1445 aa23.97■■□□□ 1.43
CUEDC1-211ENST00000582951 MAGI3Q5TCQ9 1506 aa23.97■■□□□ 1.43
CUEDC1-211ENST00000582951 ERCC6L2Q5T890 1561 aa23.96■■□□□ 1.43
CUEDC1-211ENST00000582951 PHLDB1Q86UU1 1377 aa23.93■■□□□ 1.42
CUEDC1-211ENST00000582951 CCNB3Q8WWL7 1395 aa23.92■■□□□ 1.42
CUEDC1-211ENST00000582951 ARHGEF11O15085 1522 aa23.91■■□□□ 1.42
CUEDC1-211ENST00000582951 NCOA2Q15596 1464 aa23.91■■□□□ 1.42
CUEDC1-211ENST00000582951 CDK11AQ9UQ88 783 aaPredicted RBP23.86■■□□□ 1.41
CUEDC1-211ENST00000582951 UACAQ9BZF9 1416 aa23.85■■□□□ 1.41
CUEDC1-211ENST00000582951 ADCY10Q96PN6 1610 aa23.85■■□□□ 1.41
CUEDC1-211ENST00000582951 ABCC2Q92887 1545 aa23.84■■□□□ 1.41
CUEDC1-211ENST00000582951 MYOM3Q5VTT5 1437 aa23.84■■□□□ 1.41
CUEDC1-211ENST00000582951 ARID3CA6NKF2 412 aa23.82■■□□□ 1.4
CUEDC1-211ENST00000582951 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
CUEDC1-211ENST00000582951 FGD6Q6ZV73 1430 aa23.82■■□□□ 1.4
CUEDC1-211ENST00000582951 ATP10BO94823 1461 aa23.81■■□□□ 1.4
CUEDC1-211ENST00000582951 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.8■■□□□ 1.4
CUEDC1-211ENST00000582951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.79■■□□□ 1.4
CUEDC1-211ENST00000582951 HNRNPUL2Q1KMD3 747 aaKnown RBP23.79■■□□□ 1.4
CUEDC1-211ENST00000582951 UHRF1BP1LA0JNW5 1464 aa23.78■■□□□ 1.4
CUEDC1-211ENST00000582951 PTPN23Q9H3S7 1636 aa23.75■■□□□ 1.39
CUEDC1-211ENST00000582951 HRCP23327 699 aa23.75■■□□□ 1.39
CUEDC1-211ENST00000582951 ITSN2Q9NZM3 1697 aa23.75■■□□□ 1.39
CUEDC1-211ENST00000582951 KIF14Q15058 1648 aa23.74■■□□□ 1.39
CUEDC1-211ENST00000582951 MIA2Q96PC5 1412 aa23.71■■□□□ 1.39
CUEDC1-211ENST00000582951 TCOF1Q13428 1488 aaKnown RBP23.7■■□□□ 1.38
CUEDC1-211ENST00000582951 FAM50AQ14320 339 aaKnown RBP23.69■■□□□ 1.38
CUEDC1-211ENST00000582951 ZCCHC11Q5TAX3 1644 aaKnown RBP23.69■■□□□ 1.38
CUEDC1-211ENST00000582951 PLEKHD1A6NEE1 506 aa23.68■■□□□ 1.38
CUEDC1-211ENST00000582951 KDM5BQ9UGL1 1544 aa23.67■■□□□ 1.38
CUEDC1-211ENST00000582951 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
CUEDC1-211ENST00000582951 CDC42BPAQ5VT25 1732 aa23.62■■□□□ 1.37
CUEDC1-211ENST00000582951 RIMBP3CA6NJZ7 1639 aa23.59■■□□□ 1.37
CUEDC1-211ENST00000582951 RIMBP3BA6NNM3 1639 aa23.59■■□□□ 1.37
CUEDC1-211ENST00000582951 RIMBP3Q9UFD9 1639 aa23.59■■□□□ 1.37
CUEDC1-211ENST00000582951 ZEB1P37275 1124 aaPredicted RBP23.58■■□□□ 1.37
CUEDC1-211ENST00000582951 ITGAEP38570 1179 aa23.58■■□□□ 1.37
CUEDC1-211ENST00000582951 GPATCH8Q9UKJ3 1502 aaKnown RBP23.58■■□□□ 1.36
CUEDC1-211ENST00000582951 CCER1Q8TC90 406 aaPredicted RBP23.54■■□□□ 1.36
CUEDC1-211ENST00000582951 PREX2Q70Z35 1606 aa23.54■■□□□ 1.36
CUEDC1-211ENST00000582951 DNMT1P26358 1616 aaKnown RBP23.53■■□□□ 1.36
CUEDC1-211ENST00000582951 CAMSAP2Q08AD1 1489 aa23.51■■□□□ 1.35
CUEDC1-211ENST00000582951 MYO5CQ9NQX4 1742 aa23.5■■□□□ 1.35
CUEDC1-211ENST00000582951 TTC37Q6PGP7 1564 aa23.5■■□□□ 1.35
CUEDC1-211ENST00000582951 SETD5Q9C0A6 1442 aa23.5■■□□□ 1.35
CUEDC1-211ENST00000582951 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.49■■□□□ 1.35
CUEDC1-211ENST00000582951 CDC42BPBQ9Y5S2 1711 aa23.47■■□□□ 1.35
CUEDC1-211ENST00000582951 CFDP1Q9UEE9 299 aaPredicted RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms