RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
CDK5RAP3-225ENST00000582482 DHX57Q6P158 1386 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-225ENST00000582482 FAM50AQ14320 339 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-225ENST00000582482 PHLDB1Q86UU1 1377 aa15.87■□□□□ 0.13
CDK5RAP3-225ENST00000582482 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
CDK5RAP3-225ENST00000582482 PCF11O94913 1555 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-225ENST00000582482 ARID3CA6NKF2 412 aa15.87■□□□□ 0.13
CDK5RAP3-225ENST00000582482 MIER1Q8N108 512 aa15.87■□□□□ 0.13
CDK5RAP3-225ENST00000582482 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
CDK5RAP3-225ENST00000582482 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
CDK5RAP3-225ENST00000582482 RRBP1Q9P2E9 1410 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-225ENST00000582482 TIAM1Q13009 1591 aa15.84■□□□□ 0.13
CDK5RAP3-225ENST00000582482 LRRC9Q6ZRR7 1453 aa15.8■□□□□ 0.12
CDK5RAP3-225ENST00000582482 ACIN1Q9UKV3 1341 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-225ENST00000582482 RAB3GAP2Q9H2M9 1393 aa15.78■□□□□ 0.12
CDK5RAP3-225ENST00000582482 LAMC3Q9Y6N6 1575 aa15.77■□□□□ 0.11
CDK5RAP3-225ENST00000582482 AQRO60306 1485 aaKnown RBP eCLIP15.76■□□□□ 0.11
CDK5RAP3-225ENST00000582482 SIN3AQ96ST3 1273 aa15.75■□□□□ 0.11
CDK5RAP3-225ENST00000582482 GAPVD1Q14C86 1478 aa15.75■□□□□ 0.11
CDK5RAP3-225ENST00000582482 WDR97A6NE52 1622 aa15.74■□□□□ 0.11
CDK5RAP3-225ENST00000582482 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
CDK5RAP3-225ENST00000582482 CTTNBP2Q8WZ74 1663 aa15.71■□□□□ 0.11
CDK5RAP3-225ENST00000582482 GTF3C3Q9Y5Q9 886 aa15.71■□□□□ 0.11
CDK5RAP3-225ENST00000582482 ABCA5Q8WWZ7 1642 aa15.71■□□□□ 0.1
CDK5RAP3-225ENST00000582482 FHAD1B1AJZ9 1412 aa15.69■□□□□ 0.1
CDK5RAP3-225ENST00000582482 LRRIQ1Q96JM4 1722 aa15.69■□□□□ 0.1
CDK5RAP3-225ENST00000582482 HIRIP3Q9BW71 556 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-225ENST00000582482 CUL7Q14999 1698 aa15.69■□□□□ 0.1
CDK5RAP3-225ENST00000582482 CFAP43Q8NDM7 1665 aa15.68■□□□□ 0.1
CDK5RAP3-225ENST00000582482 MAPKBP1O60336 1514 aa15.67■□□□□ 0.1
CDK5RAP3-225ENST00000582482 ZNF608Q9ULD9 1512 aaPredicted RBP15.66■□□□□ 0.1
CDK5RAP3-225ENST00000582482 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP3-225ENST00000582482 CASKIN1Q8WXD9 1431 aa15.64■□□□□ 0.09
CDK5RAP3-225ENST00000582482 SNAPC4Q5SXM2 1469 aa15.64■□□□□ 0.09
CDK5RAP3-225ENST00000582482 SETD5Q9C0A6 1442 aa15.63■□□□□ 0.09
CDK5RAP3-225ENST00000582482 FYCO1Q9BQS8 1478 aa15.63■□□□□ 0.09
CDK5RAP3-225ENST00000582482 MTUS2Q5JR59 1369 aa15.62■□□□□ 0.09
CDK5RAP3-225ENST00000582482 PTPRKQ15262 1439 aa15.62■□□□□ 0.09
CDK5RAP3-225ENST00000582482 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
CDK5RAP3-225ENST00000582482 MAP3K1Q13233 1512 aa15.6■□□□□ 0.09
CDK5RAP3-225ENST00000582482 EFCAB5A4FU69 1503 aa15.6■□□□□ 0.09
CDK5RAP3-225ENST00000582482 MAGI3Q5TCQ9 1506 aa15.59■□□□□ 0.09
CDK5RAP3-225ENST00000582482 CENPBP07199 599 aaPredicted RBP15.58■□□□□ 0.09
CDK5RAP3-225ENST00000582482 KCNH8Q96L42 1107 aa15.58■□□□□ 0.09
CDK5RAP3-225ENST00000582482 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
CDK5RAP3-225ENST00000582482 SAMD9Q5K651 1589 aa15.56■□□□□ 0.08
CDK5RAP3-225ENST00000582482 FMN1Q68DA7 1419 aa15.56■□□□□ 0.08
CDK5RAP3-225ENST00000582482 FGD6Q6ZV73 1430 aa15.56■□□□□ 0.08
CDK5RAP3-225ENST00000582482 CDK13Q14004 1512 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-225ENST00000582482 RRP7BPQ9NSQ0 103 aa15.55■□□□□ 0.08
CDK5RAP3-225ENST00000582482 FBLN2P98095 1184 aa15.54■□□□□ 0.08
CDK5RAP3-225ENST00000582482 GRIN2BQ13224 1484 aa15.54■□□□□ 0.08
CDK5RAP3-225ENST00000582482 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
CDK5RAP3-225ENST00000582482 NCOA2Q15596 1464 aa15.53■□□□□ 0.08
CDK5RAP3-225ENST00000582482 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
CDK5RAP3-225ENST00000582482 ADAMTS12P58397 1594 aa15.49■□□□□ 0.07
CDK5RAP3-225ENST00000582482 FOXD1Q16676 465 aa15.48■□□□□ 0.07
CDK5RAP3-225ENST00000582482 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-225ENST00000582482 IQGAP2Q13576 1575 aa15.46■□□□□ 0.07
CDK5RAP3-225ENST00000582482 ADRA2BP18089 450 aa15.45■□□□□ 0.06
CDK5RAP3-225ENST00000582482 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
CDK5RAP3-225ENST00000582482 CCDC18Q5T9S5 1454 aa15.45■□□□□ 0.06
CDK5RAP3-225ENST00000582482 ZNF644Q9H582 1327 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-225ENST00000582482 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
CDK5RAP3-225ENST00000582482 THOC2Q8NI27 1593 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-225ENST00000582482 KDM6BO15054 1643 aa15.43■□□□□ 0.06
CDK5RAP3-225ENST00000582482 EPRSP07814 1512 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-225ENST00000582482 SUPT6HQ7KZ85 1726 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-225ENST00000582482 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-225ENST00000582482 NAIPQ13075 1403 aa15.4■□□□□ 0.06
CDK5RAP3-225ENST00000582482 PTPN23Q9H3S7 1636 aa15.4■□□□□ 0.06
CDK5RAP3-225ENST00000582482 TRIM52Q96A61 297 aa15.4■□□□□ 0.06
CDK5RAP3-225ENST00000582482 UGGT2Q9NYU1 1516 aa15.39■□□□□ 0.05
CDK5RAP3-225ENST00000582482 EHBP1L1Q8N3D4 1523 aa15.38■□□□□ 0.05
CDK5RAP3-225ENST00000582482 WDR62O43379 1518 aa15.37■□□□□ 0.05
CDK5RAP3-225ENST00000582482 DISP1Q96F81 1524 aa15.37■□□□□ 0.05
CDK5RAP3-225ENST00000582482 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
CDK5RAP3-225ENST00000582482 CHMP7Q8WUX9 453 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-225ENST00000582482 HFM1A2PYH4 1435 aa15.36■□□□□ 0.05
CDK5RAP3-225ENST00000582482 PPP1R15AO75807 674 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-225ENST00000582482 HECW1Q76N89 1606 aa15.35■□□□□ 0.05
CDK5RAP3-225ENST00000582482 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
CDK5RAP3-225ENST00000582482 ZNF777Q9ULD5 760 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-225ENST00000582482 PLB1Q6P1J6 1458 aa15.33■□□□□ 0.04
CDK5RAP3-225ENST00000582482 ARHGEF11O15085 1522 aa15.32■□□□□ 0.04
CDK5RAP3-225ENST00000582482 TONSLQ96HA7 1378 aa15.32■□□□□ 0.04
CDK5RAP3-225ENST00000582482 PRG4Q92954 1404 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-225ENST00000582482 DENND4BO75064 1496 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-225ENST00000582482 KIAA0556O60303 1618 aa15.32■□□□□ 0.04
CDK5RAP3-225ENST00000582482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.31■□□□□ 0.04
CDK5RAP3-225ENST00000582482 NUP153P49790 1475 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-225ENST00000582482 CEP170Q5SW79 1584 aa15.31■□□□□ 0.04
CDK5RAP3-225ENST00000582482 UACAQ9BZF9 1416 aa15.3■□□□□ 0.04
CDK5RAP3-225ENST00000582482 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
CDK5RAP3-225ENST00000582482 KIAA0586Q9BVV6 1533 aa15.28■□□□□ 0.04
CDK5RAP3-225ENST00000582482 JPH4Q96JJ6 628 aa15.24■□□□□ 0.03
CDK5RAP3-225ENST00000582482 MPHOSPH9Q99550 1183 aa15.24■□□□□ 0.03
CDK5RAP3-225ENST00000582482 KDM5BQ9UGL1 1544 aa15.23■□□□□ 0.03
CDK5RAP3-225ENST00000582482 RAPGEF6Q8TEU7 1601 aa15.23■□□□□ 0.03
CDK5RAP3-225ENST00000582482 KIF14Q15058 1648 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms