RNA–Protein interactions for RNA: ENST00000582478.5

RFNG-208, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best)

Gene RFNG, Length 3,107 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-208ENST00000582478 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
RFNG-208ENST00000582478 GOLGA3Q08378 1498 aa22.79■■□□□ 1.24
RFNG-208ENST00000582478 TIMELESSQ9UNS1 1208 aa22.77■■□□□ 1.24
RFNG-208ENST00000582478 NOP58Q9Y2X3 529 aaKnown RBP22.76■■□□□ 1.23
RFNG-208ENST00000582478 CLIP1P30622 1438 aa22.75■■□□□ 1.23
RFNG-208ENST00000582478 SLC24A1O60721 1099 aa22.73■■□□□ 1.23
RFNG-208ENST00000582478 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
RFNG-208ENST00000582478 PODXL2Q9NZ53 605 aa22.72■■□□□ 1.23
RFNG-208ENST00000582478 CEP164Q9UPV0 1460 aa22.63■■□□□ 1.21
RFNG-208ENST00000582478 EEA1Q15075 1411 aa22.62■■□□□ 1.21
RFNG-208ENST00000582478 NCAPD3P42695 1498 aa22.62■■□□□ 1.21
RFNG-208ENST00000582478 KANK4Q5T7N3 995 aaPredicted RBP22.59■■□□□ 1.21
RFNG-208ENST00000582478 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
RFNG-208ENST00000582478 CUX1P39880 1505 aa22.56■■□□□ 1.2
RFNG-208ENST00000582478 NESP48681 1621 aa22.55■■□□□ 1.2
RFNG-208ENST00000582478 BRPF3Q9ULD4 1205 aa22.53■■□□□ 1.2
RFNG-208ENST00000582478 CUX2O14529 1486 aa22.5■■□□□ 1.19
RFNG-208ENST00000582478 VSIG10Q8N0Z9 540 aa22.49■■□□□ 1.19
RFNG-208ENST00000582478 CC2D2AQ9P2K1 1620 aa22.49■■□□□ 1.19
RFNG-208ENST00000582478 ARID3CA6NKF2 412 aa22.48■■□□□ 1.19
RFNG-208ENST00000582478 B4GALNT3Q6L9W6 998 aa22.46■■□□□ 1.19
RFNG-208ENST00000582478 CADPSQ9ULU8 1353 aa22.45■■□□□ 1.19
RFNG-208ENST00000582478 KIF27Q86VH2 1401 aa22.44■■□□□ 1.18
RFNG-208ENST00000582478 TOP2BQ02880 1626 aa22.44■■□□□ 1.18
RFNG-208ENST00000582478 CFTRP13569 1480 aa22.44■■□□□ 1.18
RFNG-208ENST00000582478 ZMYND15Q9H091 742 aa22.43■■□□□ 1.18
RFNG-208ENST00000582478 LAS1LQ9Y4W2 734 aaKnown RBP22.42■■□□□ 1.18
RFNG-208ENST00000582478 ZBTB47Q9UFB7 747 aaPredicted RBP22.41■■□□□ 1.18
RFNG-208ENST00000582478 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
RFNG-208ENST00000582478 HMGXB3Q12766 1538 aa22.39■■□□□ 1.18
RFNG-208ENST00000582478 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.18
RFNG-208ENST00000582478 HIRIP3Q9BW71 556 aaPredicted RBP22.38■■□□□ 1.17
RFNG-208ENST00000582478 KIF21BO75037 1637 aa22.35■■□□□ 1.17
RFNG-208ENST00000582478 NEFMP07197 916 aa22.35■■□□□ 1.17
RFNG-208ENST00000582478 ANP32AP39687 249 aaKnown RBP22.34■■□□□ 1.17
RFNG-208ENST00000582478 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
RFNG-208ENST00000582478 FAM50AQ14320 339 aaKnown RBP22.32■■□□□ 1.16
RFNG-208ENST00000582478 TDRD9Q8NDG6 1382 aaKnown RBP22.31■■□□□ 1.16
RFNG-208ENST00000582478 A0A0U1RQG5 324 aaPredicted RBP22.31■■□□□ 1.16
RFNG-208ENST00000582478 NPM2Q86SE8 214 aaKnown RBP22.31■■□□□ 1.16
RFNG-208ENST00000582478 ARAP1Q96P48 1450 aa22.3■■□□□ 1.16
RFNG-208ENST00000582478 FANCD2Q9BXW9 1451 aa22.3■■□□□ 1.16
RFNG-208ENST00000582478 HNRNPUQ00839 825 aaKnown RBP eCLIP22.29■■□□□ 1.16
RFNG-208ENST00000582478 IGF1RP08069 1367 aa22.29■■□□□ 1.16
RFNG-208ENST00000582478 CARMIL1Q5VZK9 1371 aa22.28■■□□□ 1.16
RFNG-208ENST00000582478 IPO9Q96P70 1041 aaKnown RBP22.28■■□□□ 1.16
RFNG-208ENST00000582478 GLIPR1L2Q4G1C9 344 aa22.26■■□□□ 1.15
RFNG-208ENST00000582478 PRXQ9BXM0 1461 aa22.25■■□□□ 1.15
RFNG-208ENST00000582478 DAXXQ9UER7 740 aaPredicted RBP22.25■■□□□ 1.15
RFNG-208ENST00000582478 PPP4R2Q9NY27 417 aa22.24■■□□□ 1.15
RFNG-208ENST00000582478 ANP32CO43423 234 aa22.2■■□□□ 1.14
RFNG-208ENST00000582478 BIVM-ERCC5R4GMW8 1640 aa22.19■■□□□ 1.14
RFNG-208ENST00000582478 DHX57Q6P158 1386 aaKnown RBP22.15■■□□□ 1.14
RFNG-208ENST00000582478 WASHC2AQ641Q2 1341 aa22.15■■□□□ 1.14
RFNG-208ENST00000582478 SIN3AQ96ST3 1273 aa22.14■■□□□ 1.13
RFNG-208ENST00000582478 RSPH6AQ9H0K4 717 aa22.14■■□□□ 1.13
RFNG-208ENST00000582478 ARHGAP35Q9NRY4 1499 aa22.13■■□□□ 1.13
RFNG-208ENST00000582478 FHOD3Q2V2M9 1422 aa22.12■■□□□ 1.13
RFNG-208ENST00000582478 C11orf95C9JLR9 678 aaPredicted RBP22.11■■□□□ 1.13
RFNG-208ENST00000582478 FBLN2P98095 1184 aa22.09■■□□□ 1.13
RFNG-208ENST00000582478 POLA1P09884 1462 aaPredicted RBP22.05■■□□□ 1.12
RFNG-208ENST00000582478 WASHC2CQ9Y4E1 1318 aa22.05■■□□□ 1.12
RFNG-208ENST00000582478 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
RFNG-208ENST00000582478 GSE1Q14687 1217 aa22■■□□□ 1.11
RFNG-208ENST00000582478 CCER2I3L3R5 266 aa21.99■■□□□ 1.11
RFNG-208ENST00000582478 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
RFNG-208ENST00000582478 PPP1R15AO75807 674 aaPredicted RBP21.97■■□□□ 1.11
RFNG-208ENST00000582478 FRAT1Q92837 279 aaPredicted RBP21.97■■□□□ 1.11
RFNG-208ENST00000582478 URB2Q14146 1524 aaKnown RBP21.94■■□□□ 1.1
RFNG-208ENST00000582478 CCNB3Q8WWL7 1395 aa21.94■■□□□ 1.1
RFNG-208ENST00000582478 CHIC2Q9UKJ5 165 aa21.93■■□□□ 1.1
RFNG-208ENST00000582478 AQRO60306 1485 aaKnown RBP eCLIP21.91■■□□□ 1.18e-10■■■■□ 22.4
RFNG-208ENST00000582478 RBM10P98175 930 aaKnown RBP21.91■■□□□ 1.1
RFNG-208ENST00000582478 HSP90AA2PQ14568 343 aaPredicted RBP21.91■■□□□ 1.1
RFNG-208ENST00000582478 USP35Q9P2H5 1018 aa21.9■■□□□ 1.1
RFNG-208ENST00000582478 PHLDB1Q86UU1 1377 aa21.9■■□□□ 1.1
RFNG-208ENST00000582478 ARID4BQ4LE39 1312 aaPredicted RBP21.89■■□□□ 1.1
RFNG-208ENST00000582478 NAP1L5Q96NT1 182 aaPredicted RBP21.87■■□□□ 1.09
RFNG-208ENST00000582478 SENP3-EIF4A1A0A087X0R7 540 aa21.86■■□□□ 1.09
RFNG-208ENST00000582478 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
RFNG-208ENST00000582478 PPM1GO15355 546 aaPredicted RBP21.83■■□□□ 1.09
RFNG-208ENST00000582478 FAM43AQ8N2R8 423 aa21.82■■□□□ 1.08
RFNG-208ENST00000582478 PDS5BQ9NTI5 1447 aa21.82■■□□□ 1.08
RFNG-208ENST00000582478 SLC4A3P48751 1232 aa21.82■■□□□ 1.08
RFNG-208ENST00000582478 DNMBPQ6XZF7 1577 aa21.81■■□□□ 1.08
RFNG-208ENST00000582478 FAM9BQ8IZU0 186 aa21.81■■□□□ 1.08
RFNG-208ENST00000582478 RAB3GAP2Q9H2M9 1393 aa21.81■■□□□ 1.08
RFNG-208ENST00000582478 ARXQ96QS3 562 aa21.8■■□□□ 1.08
RFNG-208ENST00000582478 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
RFNG-208ENST00000582478 MTUS2Q5JR59 1369 aa21.78■■□□□ 1.08
RFNG-208ENST00000582478 NFKBIBQ15653 356 aa21.78■■□□□ 1.08
RFNG-208ENST00000582478 RRP7BPQ9NSQ0 103 aa21.78■■□□□ 1.08
RFNG-208ENST00000582478 PDE4CQ08493 712 aa21.77■■□□□ 1.08
RFNG-208ENST00000582478 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
RFNG-208ENST00000582478 RRAGDQ9NQL2 400 aaPredicted RBP21.75■■□□□ 1.07
RFNG-208ENST00000582478 ABCA10Q8WWZ4 1543 aa21.74■■□□□ 1.07
RFNG-208ENST00000582478 AAMPQ13685 434 aa21.73■■□□□ 1.07
RFNG-208ENST00000582478 HSP90AA1P07900 732 aaKnown RBP21.73■■□□□ 1.07
RFNG-208ENST00000582478 PCF11O94913 1555 aaKnown RBP21.72■■□□□ 1.07
RFNG-208ENST00000582478 FGD1P98174 961 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms